Clone BO15694 Report

Search the DGRC for BO15694

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:156
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptCG5325-RB
Protein status:BO15694.pep: validated full length
Sequenced Size:550

Clone Sequence Records

BO15694.3prime Sequence

548 bp (548 high quality bases) assembled on 2006-06-02

> BO15694.3prime
ATGGTCTAGAAAGCTTGCATGATTGAGCAAGGAGAATTCATATTTCATTT
TCAGGATGCATACCCCTTCAAGATTCAGTGAACCAAACATGCTGGCTATG
TCGTTCTCCGAGGCGGGAGCAGCCAGGTTCTCGGAGCCCTCTTGCAGACC
CTTGAGAGCCTGGGAAATGCTATCAGAATACTTGGAGACATCCTCGTCGG
TGGCCGAATTTTCGCCGCTCAAGGTGAGCGCTGCCGCTTCGGCCATCTTT
TTGAAACCGGCCATGATCTGGTCGGGATCCTGGGGCAGCGGCGGAATATC
GCCACTGGGCGTGTCCGGACCTCCGAAGAGCGTGTTCATGCGATCGGCCA
GCACCTTGGCCTGCTCAATGAAAAACGCATCTGGATCCTCGGAGCCCTCA
GGTCCAGCGTTGGTCGCCACATCCGATGATGCGGACGGCTCCTTTTGGTC
ACCGGCACCACTTTTATCGAAATCCTGGAGAGCACTGTCCAGCAAGTCGT
TTAATTCATCGCCATTCTTCTTTTCTTCGGACATGTCGACTGATAACT

BO15694.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG5325-PB 519 CG5325-RB 1..516 534..19 2580 100 Minus
CG5325-PA 879 CG5325-RA 1..472 534..63 2360 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:10:37
Subject Length Description Subject Range Query Range Score Percent Strand
Pex19-RC 1596 CG5325-RC 480..951 534..63 2360 100 Minus
Pex19-RA 1217 CG5325-RA 101..572 534..63 2360 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:10:31
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12094173..12094526 372..19 1755 99.7 Minus
2L 23513712 2L 12093994..12094111 485..368 590 100 Minus
2L 23513712 2L 12093862..12093913 534..483 260 100 Minus
Blast to na_te.dros performed on 2015-02-10 22:10:35 has no hits.

BO15694.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:53:08 Download gff for BO15694.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5325-PB 1..519 15..534 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:57:52 Download gff for BO15694.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5325-PB 1..519 15..534 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 07:43:35 Download gff for BO15694.3prime
Subject Subject Range Query Range Percent Splice Strand
Pex19-RA 101..575 59..534 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:05:11 Download gff for BO15694.3prime
Subject Subject Range Query Range Percent Splice Strand
Pex19-RA 101..575 59..534 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:05:11 Download gff for BO15694.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 12093862..12093910 486..534 100 -> Minus
2L 12093994..12094111 368..485 100 -> Minus
2L 12094178..12094529 15..367 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:43:35 Download gff for BO15694.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12093994..12094111 368..485 100 -> Minus
arm_2L 12093862..12093910 486..534 100 -> Minus
arm_2L 12094178..12094529 15..367 99   Minus

BO15694.5prime Sequence

548 bp (548 high quality bases) assembled on 2006-05-30

> BO15694.5prime
GAAGTTATCAGTCGACATGTCCGAAGAAAAGAAGAATGGCGATGAATTAA
ACGACTTGCTGGACAGTGCTCTCCAGGATTTCGATAAAAGTGGTGCCGGT
GACCAAAAGGAGCCGTCCGCATCATCGGATGTGGCGACCAACGCTGGACC
TGAGGGCTCCGAGGATCCAGATGCGTTTTTCATTGAGCAGGCCAAGGTGC
TGGCCGATCGCATGAACACGCTCTTCGGAGGTCCGGACACGCCCAGTGGC
GATATTCCGCCGCTGCCCCAGGATCCCGACCAGATCATGGCCGGTTTCAA
AAAGATGGCCGAAGCGGCAGCGCTCACCTTGAGCGGCGAAAATTCGGCCA
CCGACGAGGATGTCTCCAAGTATTCTGATAGCATTTCCCAGGCTCTCAAG
GGTCTGCAAGAGGGCTCCGAGAACCTGGCTGCTCCCGCCTCGGAGAACGA
CATAGCCAGCATGTTTGGTTCACTGAATCTTGAAGGGGTATGCATCCTGA
AAATGAAATATGAATTCTCCTTGCTCAATCATGCAAGCTTTCTAGACC

BO15694.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG5325-PB 519 CG5325-RB 1..516 17..532 2580 100 Plus
CG5325-PA 879 CG5325-RA 1..472 17..488 2360 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:41:40
Subject Length Description Subject Range Query Range Score Percent Strand
Pex19-RC 1596 CG5325-RC 480..951 17..488 2360 100 Plus
Pex19-RA 1217 CG5325-RA 101..572 17..488 2360 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:41:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12094173..12094526 179..532 1755 99.7 Plus
2L 23513712 2L 12093994..12094111 66..183 590 100 Plus
2L 23513712 2L 12093862..12093913 17..68 260 100 Plus
Blast to na_te.dros performed on 2015-02-12 11:41:37 has no hits.

BO15694.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:53:09 Download gff for BO15694.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5325-PB 1..519 17..536 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:57:54 Download gff for BO15694.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5325-PB 1..519 17..536 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:08:49 Download gff for BO15694.5prime
Subject Subject Range Query Range Percent Splice Strand
Pex19-RA 101..575 17..492 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:47:25 Download gff for BO15694.5prime
Subject Subject Range Query Range Percent Splice Strand
Pex19-RA 101..575 17..492 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:47:25 Download gff for BO15694.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 12093862..12093910 17..65 100 -> Plus
2L 12093994..12094111 66..183 100 -> Plus
2L 12094178..12094529 184..536 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:08:49 Download gff for BO15694.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12093862..12093910 17..65 100 -> Plus
arm_2L 12093994..12094111 66..183 100 -> Plus
arm_2L 12094178..12094529 184..536 99   Plus

BO15694.complete Sequence

550 bp (550 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633555

> BO15694.complete
GAAGTTATCAGTCGACATGTCCGAAGAAAAGAAGAATGGCGATGAATTAA
ACGACTTGCTGGACAGTGCTCTCCAGGATTTCGATAAAAGTGGTGCCGGT
GACCAAAAGGAGCCGTCCGCATCATCGGATGTGGCGACCAACGCTGGACC
TGAGGGCTCCGAGGATCCAGATGCGTTTTTCATTGAGCAGGCCAAGGTGC
TGGCCGATCGCATGAACACGCTCTTCGGAGGTCCGGACACGCCCAGTGGC
GATATTCCGCCGCTGCCCCAGGATCCCGACCAGATCATGGCCGGTTTCAA
AAAGATGGCCGAAGCGGCAGCGCTCACCTTGAGCGGCGAAAATTCGGCCA
CCGACGAGGATGTCTCCAAGTATTCTGATAGCATTTCCCAGGCTCTCAAG
GGTCTGCAAGAGGGCTCCGAGAACCTGGCTGCTCCCGCCTCGGAGAACGA
CATAGCCAGCATGTTTGGTTCACTGAATCTTGAAGGGGTATGCATCCTGA
AAATGAAATATGAATTCTCCTTGCTCAATCATGCAAGCTTTCTAGACCAT

BO15694.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:47:32
Subject Length Description Subject Range Query Range Score Percent Strand
Pex19-RC 879 CG5325-PC 1..472 17..488 2360 100 Plus
Pex19-RA 879 CG5325-PA 1..472 17..488 2360 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:47:33
Subject Length Description Subject Range Query Range Score Percent Strand
Pex19-RC 1596 CG5325-RC 480..951 17..488 2360 100 Plus
Pex19-RA 1217 CG5325-RA 101..572 17..488 2360 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:47:29
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12094173..12094526 179..532 1755 99.7 Plus
2L 23513712 2L 12093994..12094111 66..183 590 100 Plus
2L 23513712 2L 12093862..12093913 17..68 260 100 Plus
Blast to na_te.dros performed on 2014-11-27 19:47:31 has no hits.

BO15694.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:47 Download gff for BO15694.complete
Subject Subject Range Query Range Percent Splice Strand
CG5325-RB 1..519 17..536 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:03:46 Download gff for BO15694.complete
Subject Subject Range Query Range Percent Splice Strand
CG5325-RB 92..610 17..536 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:03:20 Download gff for BO15694.complete
Subject Subject Range Query Range Percent Splice Strand
Pex19-RA 101..575 17..492 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:47 Download gff for BO15694.complete
Subject Subject Range Query Range Percent Splice Strand
CG5325-RB 92..610 17..536 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:08:27 Download gff for BO15694.complete
Subject Subject Range Query Range Percent Splice Strand
Pex19-RA 101..575 17..492 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:08:27 Download gff for BO15694.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12093862..12093910 17..65 100 -> Plus
2L 12093994..12094111 66..183 100 -> Plus
2L 12094178..12094526 184..534 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:03:20 Download gff for BO15694.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12093862..12093910 17..65 100 -> Plus
arm_2L 12093994..12094111 66..183 100 -> Plus
arm_2L 12094178..12094526 184..534 99   Plus

BO15694.pep Sequence

Translation from 16 to 550

> BO15694.pep
MSEEKKNGDELNDLLDSALQDFDKSGAGDQKEPSASSDVATNAGPEGSED
PDAFFIEQAKVLADRMNTLFGGPDTPSGDIPPLPQDPDQIMAGFKKMAEA
AALTLSGENSATDEDVSKYSDSISQALKGLQEGSENLAAPASENDIASMF
GSLNLEGVCILKMKYEFSLLNHASFLDH

BO15694.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:59:48
Subject Length Description Subject Range Query Range Score Percent Strand
Pex19-PC 292 CG5325-PC 1..157 1..157 794 100 Plus
Pex19-PA 292 CG5325-PA 1..157 1..157 794 100 Plus