Clone Sequence Records
BO15694.3prime Sequence
548 bp (548 high quality bases) assembled on 2006-06-02
> BO15694.3prime
ATGGTCTAGAAAGCTTGCATGATTGAGCAAGGAGAATTCATATTTCATTT
TCAGGATGCATACCCCTTCAAGATTCAGTGAACCAAACATGCTGGCTATG
TCGTTCTCCGAGGCGGGAGCAGCCAGGTTCTCGGAGCCCTCTTGCAGACC
CTTGAGAGCCTGGGAAATGCTATCAGAATACTTGGAGACATCCTCGTCGG
TGGCCGAATTTTCGCCGCTCAAGGTGAGCGCTGCCGCTTCGGCCATCTTT
TTGAAACCGGCCATGATCTGGTCGGGATCCTGGGGCAGCGGCGGAATATC
GCCACTGGGCGTGTCCGGACCTCCGAAGAGCGTGTTCATGCGATCGGCCA
GCACCTTGGCCTGCTCAATGAAAAACGCATCTGGATCCTCGGAGCCCTCA
GGTCCAGCGTTGGTCGCCACATCCGATGATGCGGACGGCTCCTTTTGGTC
ACCGGCACCACTTTTATCGAAATCCTGGAGAGCACTGTCCAGCAAGTCGT
TTAATTCATCGCCATTCTTCTTTTCTTCGGACATGTCGACTGATAACT
BO15694.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5325-PB | 519 | CG5325-RB | 1..516 | 534..19 | 2580 | 100 | Minus |
CG5325-PA | 879 | CG5325-RA | 1..472 | 534..63 | 2360 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:10:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pex19-RC | 1596 | CG5325-RC | 480..951 | 534..63 | 2360 | 100 | Minus |
Pex19-RA | 1217 | CG5325-RA | 101..572 | 534..63 | 2360 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:10:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 12094173..12094526 | 372..19 | 1755 | 99.7 | Minus |
2L | 23513712 | 2L | 12093994..12094111 | 485..368 | 590 | 100 | Minus |
2L | 23513712 | 2L | 12093862..12093913 | 534..483 | 260 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 22:10:35 has no hits.
BO15694.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:53:08 Download gff for
BO15694.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5325-PB | 1..519 | 15..534 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:57:52 Download gff for
BO15694.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5325-PB | 1..519 | 15..534 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 07:43:35 Download gff for
BO15694.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pex19-RA | 101..575 | 59..534 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:05:11 Download gff for
BO15694.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pex19-RA | 101..575 | 59..534 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:05:11 Download gff for
BO15694.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 12093862..12093910 | 486..534 | 100 | -> | Minus |
2L | 12093994..12094111 | 368..485 | 100 | -> | Minus |
2L | 12094178..12094529 | 15..367 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:43:35 Download gff for
BO15694.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 12093994..12094111 | 368..485 | 100 | -> | Minus |
arm_2L | 12093862..12093910 | 486..534 | 100 | -> | Minus |
arm_2L | 12094178..12094529 | 15..367 | 99 | | Minus |
BO15694.5prime Sequence
548 bp (548 high quality bases) assembled on 2006-05-30
> BO15694.5prime
GAAGTTATCAGTCGACATGTCCGAAGAAAAGAAGAATGGCGATGAATTAA
ACGACTTGCTGGACAGTGCTCTCCAGGATTTCGATAAAAGTGGTGCCGGT
GACCAAAAGGAGCCGTCCGCATCATCGGATGTGGCGACCAACGCTGGACC
TGAGGGCTCCGAGGATCCAGATGCGTTTTTCATTGAGCAGGCCAAGGTGC
TGGCCGATCGCATGAACACGCTCTTCGGAGGTCCGGACACGCCCAGTGGC
GATATTCCGCCGCTGCCCCAGGATCCCGACCAGATCATGGCCGGTTTCAA
AAAGATGGCCGAAGCGGCAGCGCTCACCTTGAGCGGCGAAAATTCGGCCA
CCGACGAGGATGTCTCCAAGTATTCTGATAGCATTTCCCAGGCTCTCAAG
GGTCTGCAAGAGGGCTCCGAGAACCTGGCTGCTCCCGCCTCGGAGAACGA
CATAGCCAGCATGTTTGGTTCACTGAATCTTGAAGGGGTATGCATCCTGA
AAATGAAATATGAATTCTCCTTGCTCAATCATGCAAGCTTTCTAGACC
BO15694.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:39:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5325-PB | 519 | CG5325-RB | 1..516 | 17..532 | 2580 | 100 | Plus |
CG5325-PA | 879 | CG5325-RA | 1..472 | 17..488 | 2360 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:41:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pex19-RC | 1596 | CG5325-RC | 480..951 | 17..488 | 2360 | 100 | Plus |
Pex19-RA | 1217 | CG5325-RA | 101..572 | 17..488 | 2360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:41:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 12094173..12094526 | 179..532 | 1755 | 99.7 | Plus |
2L | 23513712 | 2L | 12093994..12094111 | 66..183 | 590 | 100 | Plus |
2L | 23513712 | 2L | 12093862..12093913 | 17..68 | 260 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 11:41:37 has no hits.
BO15694.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:53:09 Download gff for
BO15694.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5325-PB | 1..519 | 17..536 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:57:54 Download gff for
BO15694.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5325-PB | 1..519 | 17..536 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 05:08:49 Download gff for
BO15694.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pex19-RA | 101..575 | 17..492 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:47:25 Download gff for
BO15694.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pex19-RA | 101..575 | 17..492 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:47:25 Download gff for
BO15694.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 12093862..12093910 | 17..65 | 100 | -> | Plus |
2L | 12093994..12094111 | 66..183 | 100 | -> | Plus |
2L | 12094178..12094529 | 184..536 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 05:08:49 Download gff for
BO15694.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 12093862..12093910 | 17..65 | 100 | -> | Plus |
arm_2L | 12093994..12094111 | 66..183 | 100 | -> | Plus |
arm_2L | 12094178..12094529 | 184..536 | 99 | | Plus |
BO15694.complete Sequence
550 bp (550 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633555
> BO15694.complete
GAAGTTATCAGTCGACATGTCCGAAGAAAAGAAGAATGGCGATGAATTAA
ACGACTTGCTGGACAGTGCTCTCCAGGATTTCGATAAAAGTGGTGCCGGT
GACCAAAAGGAGCCGTCCGCATCATCGGATGTGGCGACCAACGCTGGACC
TGAGGGCTCCGAGGATCCAGATGCGTTTTTCATTGAGCAGGCCAAGGTGC
TGGCCGATCGCATGAACACGCTCTTCGGAGGTCCGGACACGCCCAGTGGC
GATATTCCGCCGCTGCCCCAGGATCCCGACCAGATCATGGCCGGTTTCAA
AAAGATGGCCGAAGCGGCAGCGCTCACCTTGAGCGGCGAAAATTCGGCCA
CCGACGAGGATGTCTCCAAGTATTCTGATAGCATTTCCCAGGCTCTCAAG
GGTCTGCAAGAGGGCTCCGAGAACCTGGCTGCTCCCGCCTCGGAGAACGA
CATAGCCAGCATGTTTGGTTCACTGAATCTTGAAGGGGTATGCATCCTGA
AAATGAAATATGAATTCTCCTTGCTCAATCATGCAAGCTTTCTAGACCAT
BO15694.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:47:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pex19-RC | 879 | CG5325-PC | 1..472 | 17..488 | 2360 | 100 | Plus |
Pex19-RA | 879 | CG5325-PA | 1..472 | 17..488 | 2360 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:47:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pex19-RC | 1596 | CG5325-RC | 480..951 | 17..488 | 2360 | 100 | Plus |
Pex19-RA | 1217 | CG5325-RA | 101..572 | 17..488 | 2360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:47:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 12094173..12094526 | 179..532 | 1755 | 99.7 | Plus |
2L | 23513712 | 2L | 12093994..12094111 | 66..183 | 590 | 100 | Plus |
2L | 23513712 | 2L | 12093862..12093913 | 17..68 | 260 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 19:47:31 has no hits.
BO15694.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:47 Download gff for
BO15694.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5325-RB | 1..519 | 17..536 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:03:46 Download gff for
BO15694.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5325-RB | 92..610 | 17..536 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:03:20 Download gff for
BO15694.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pex19-RA | 101..575 | 17..492 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:47 Download gff for
BO15694.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5325-RB | 92..610 | 17..536 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:08:27 Download gff for
BO15694.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pex19-RA | 101..575 | 17..492 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:08:27 Download gff for
BO15694.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 12093862..12093910 | 17..65 | 100 | -> | Plus |
2L | 12093994..12094111 | 66..183 | 100 | -> | Plus |
2L | 12094178..12094526 | 184..534 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:03:20 Download gff for
BO15694.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 12093862..12093910 | 17..65 | 100 | -> | Plus |
arm_2L | 12093994..12094111 | 66..183 | 100 | -> | Plus |
arm_2L | 12094178..12094526 | 184..534 | 99 | | Plus |
BO15694.pep Sequence
Translation from 16 to 550
> BO15694.pep
MSEEKKNGDELNDLLDSALQDFDKSGAGDQKEPSASSDVATNAGPEGSED
PDAFFIEQAKVLADRMNTLFGGPDTPSGDIPPLPQDPDQIMAGFKKMAEA
AALTLSGENSATDEDVSKYSDSISQALKGLQEGSENLAAPASENDIASMF
GSLNLEGVCILKMKYEFSLLNHASFLDH
BO15694.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:59:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pex19-PC | 292 | CG5325-PC | 1..157 | 1..157 | 794 | 100 | Plus |
Pex19-PA | 292 | CG5325-PA | 1..157 | 1..157 | 794 | 100 | Plus |