Clone Sequence Records
BO15714.3prime Sequence
575 bp (575 high quality bases) assembled on 2006-05-30
> BO15714.3prime
ATGGTCTAGAAAGCTTGCAGTATGTTTAACCCAAAACACAGAAAAAAAAA
CAAAACAAGCCGAAGCCGAAACAGAATCAGAATCGGAATCAGAATCAAAA
CCAGAGAACCAAAAACCGAAACCGAATGGAGTGGAGTTGGAGATGGAGGC
TCTGGGCTTAAAGTATTTCACAGGAAATCTTCGGAAACGCAACCCAACAG
CAACAATATGTTCTACACATTTCTTGCGACCCCGCTCCCTGTGTGAGAAA
TCGAAATCCCAAAAACTAAATCCTATAATGCCTGCGAGGGGCGCACACAC
ATACCCATACCCATATCCATACCCATGCCCATCGAAAATCGAAAAATCCG
ACCCGCACTCACGCACGGCTACATTTTGAAATATCTCATCGTGTGTGAGT
GTTTGGCTTGGTATTTCTTCTTCCCCACACACATATAAATCTATATACAG
ATATGTATATATATATATATATATATATAAATGTATACAGATGTACACTC
TTTTTTTCAGCCTTTTTGTTTCACATCCCCACCCAGGTTCCCAGTGCCTT
TTTGGCCCCATGTCGACTGATAACT
BO15714.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:40:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31394-PA | 546 | CG31394-RA | 1..543 | 561..19 | 2715 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-03 07:11:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 07:11:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10528421..10528963 | 19..561 | 2715 | 100 | Plus |
Blast to na_te.dros performed 2015-02-03 07:11:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
transib2 | 2844 | transib2 TRANSIB2 2844bp | 2529..2568 | 99..60 | 119 | 77.5 | Minus |
transib2 | 2844 | transib2 TRANSIB2 2844bp | 2532..2565 | 90..57 | 107 | 79.4 | Minus |
BO15714.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:53:18 Download gff for
BO15714.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31394-PA | 1..546 | 16..561 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:58:07 Download gff for
BO15714.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31394-PA | 1..546 | 16..561 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:42:44 Download gff for
BO15714.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10528423..10528970 | 21..570 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:42:44 Download gff for
BO15714.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10528423..10528970 | 21..570 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:36:25 Download gff for
BO15714.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6354145..6354692 | 21..570 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:36:25 Download gff for
BO15714.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6354145..6354692 | 21..570 | 99 | | Plus |
BO15714.5prime Sequence
575 bp (575 high quality bases) assembled on 2006-05-30
> BO15714.5prime
GAAGTTATCAGTCGACATGGGGCCAAAAAGGCACTGGGAACCTGGGTGGG
GATGTGAAACAAAAAGGCTGAAAAAAAGAGTGTACATCTGTATACATTTA
TATATATATATATATATATATACATATCTGTATATAGATTTATATGTGTG
TGGGGAAGAAGAAATACCAAGCCAAACACTCACACACGATGAGATATTTC
AAAATGTAGCCGTGCGTGAGTGCGGGTCGGATTTTTCGATTTTCGATGGG
CATGGGTATGGATATGGGTATGGGTATGTGTGTGCGCCCCTCGCAGGCAT
TATAGGATTTAGTTTTTGGGATTTCGATTTCTCACACAGGGAGCGGGGTC
GCAAGAAATGTGTAGAACATATTGTTGCTGTTGGGTTGCGTTTCCGAAGA
TTTCCTGTGAAATACTTTAAGCCCAGAGCCTCCATCTCCAACTCCACTCC
ATTCGGTTTCGGTTTTTGGTTCTCTGGTTTTGATTCTGATTCCGATTCTG
ATTCTGTTTCGGCTTCGGCTTGTTTTGTTTTTTTTTCTGTGTTTTGGGTT
AAACATACTGCAAGCTTTCTAGACC
BO15714.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:40:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31394-PA | 546 | CG31394-RA | 1..543 | 17..559 | 2715 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-10 15:46:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:46:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10528421..10528963 | 559..17 | 2715 | 100 | Minus |
Blast to na_te.dros performed 2015-02-10 15:46:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
transib2 | 2844 | transib2 TRANSIB2 2844bp | 2529..2568 | 479..518 | 119 | 77.5 | Plus |
transib2 | 2844 | transib2 TRANSIB2 2844bp | 2532..2565 | 488..521 | 107 | 79.4 | Plus |
BO15714.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:53:19 Download gff for
BO15714.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31394-PA | 1..546 | 17..562 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:58:09 Download gff for
BO15714.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31394-PA | 1..546 | 17..562 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:06:25 Download gff for
BO15714.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10528423..10528970 | 8..557 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:06:25 Download gff for
BO15714.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10528423..10528970 | 8..557 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-14 14:57:13 Download gff for
BO15714.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6354145..6354692 | 8..557 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-14 14:57:13 Download gff for
BO15714.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6354145..6354692 | 8..557 | 99 | | Minus |
BO15714.complete Sequence
577 bp (577 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633558
> BO15714.complete
GAAGTTATCAGTCGACATGGGGCCAAAAAGGCACTGGGAACCTGGGTGGG
GATGTGAAACAAAAAGGCTGAAAAAAAGAGTGTACATCTGTATACATTTA
TATATATATATATATATATATACATATCTGTATATAGATTTATATGTGTG
TGGGGAAGAAGAAATACCAAGCCAAACACTCACACACGATGAGATATTTC
AAAATGTAGCCGTGCGTGAGTGCGGGTCGGATTTTTCGATTTTCGATGGG
CATGGGTATGGATATGGGTATGGGTATGTGTGTGCGCCCCTCGCAGGCAT
TATAGGATTTAGTTTTTGGGATTTCGATTTCTCACACAGGGAGCGGGGTC
GCAAGAAATGTGTAGAACATATTGTTGCTGTTGGGTTGCGTTTCCGAAGA
TTTCCTGTGAAATACTTTAAGCCCAGAGCCTCCATCTCCAACTCCACTCC
ATTCGGTTTCGGTTTTTGGTTCTCTGGTTTTGATTCTGATTCCGATTCTG
ATTCTGTTTCGGCTTCGGCTTGTTTTGTTTTTTTTTCTGTGTTTTGGGTT
AAACATACTGCAAGCTTTCTAGACCAT
BO15714.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 01:51:26 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 01:51:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:51:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10528421..10528963 | 559..17 | 2715 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 01:51:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
transib2 | 2844 | transib2 TRANSIB2 2844bp | 2529..2568 | 479..518 | 119 | 77.5 | Plus |
transib2 | 2844 | transib2 TRANSIB2 2844bp | 2532..2565 | 488..521 | 107 | 79.4 | Plus |
BO15714.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 21:52:28 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2008-11-11 06:08:13 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 21:52:28 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:33:07 Download gff for
BO15714.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10528418..10528963 | 17..561 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:33:07 Download gff for
BO15714.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10528418..10528963 | 17..561 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:03:32 Download gff for
BO15714.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6354140..6354685 | 17..561 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:03:32 Download gff for
BO15714.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6354140..6354685 | 17..561 | 99 | | Minus |
BO15714.pep Sequence
Translation from 16 to 577
> BO15714.pep
MGPKRHWEPGWGCETKRLKKRVYICIHLYIYIYIYTYLYIDLYVCGEEEI
PSQTLTHDEIFQNVAVRECGSDFSIFDGHGYGYGYGYVCAPLAGIIGFSF
WDFDFSHRERGRKKCVEHIVAVGLRFRRFPVKYFKPRASISNSTPFGFGF
WFSGFDSDSDSDSVSASACFVFFSVFWVKHTASFLDH
Sequence BO15714.pep has no blast hits.