Clone BO15714 Report

Search the DGRC for BO15714

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:157
Well:14
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO15714.pep: validated full length
Sequenced Size:577

Clone Sequence Records

BO15714.3prime Sequence

575 bp (575 high quality bases) assembled on 2006-05-30

> BO15714.3prime
ATGGTCTAGAAAGCTTGCAGTATGTTTAACCCAAAACACAGAAAAAAAAA
CAAAACAAGCCGAAGCCGAAACAGAATCAGAATCGGAATCAGAATCAAAA
CCAGAGAACCAAAAACCGAAACCGAATGGAGTGGAGTTGGAGATGGAGGC
TCTGGGCTTAAAGTATTTCACAGGAAATCTTCGGAAACGCAACCCAACAG
CAACAATATGTTCTACACATTTCTTGCGACCCCGCTCCCTGTGTGAGAAA
TCGAAATCCCAAAAACTAAATCCTATAATGCCTGCGAGGGGCGCACACAC
ATACCCATACCCATATCCATACCCATGCCCATCGAAAATCGAAAAATCCG
ACCCGCACTCACGCACGGCTACATTTTGAAATATCTCATCGTGTGTGAGT
GTTTGGCTTGGTATTTCTTCTTCCCCACACACATATAAATCTATATACAG
ATATGTATATATATATATATATATATATAAATGTATACAGATGTACACTC
TTTTTTTCAGCCTTTTTGTTTCACATCCCCACCCAGGTTCCCAGTGCCTT
TTTGGCCCCATGTCGACTGATAACT

BO15714.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:40:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG31394-PA 546 CG31394-RA 1..543 561..19 2715 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-03 07:11:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 07:11:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10528421..10528963 19..561 2715 100 Plus
Blast to na_te.dros performed 2015-02-03 07:11:48
Subject Length Description Subject Range Query Range Score Percent Strand
transib2 2844 transib2 TRANSIB2 2844bp 2529..2568 99..60 119 77.5 Minus
transib2 2844 transib2 TRANSIB2 2844bp 2532..2565 90..57 107 79.4 Minus

BO15714.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:53:18 Download gff for BO15714.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31394-PA 1..546 16..561 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:58:07 Download gff for BO15714.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31394-PA 1..546 16..561 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:42:44 Download gff for BO15714.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 10528423..10528970 21..570 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:42:44 Download gff for BO15714.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 10528423..10528970 21..570 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:36:25 Download gff for BO15714.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6354145..6354692 21..570 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:36:25 Download gff for BO15714.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6354145..6354692 21..570 99   Plus

BO15714.5prime Sequence

575 bp (575 high quality bases) assembled on 2006-05-30

> BO15714.5prime
GAAGTTATCAGTCGACATGGGGCCAAAAAGGCACTGGGAACCTGGGTGGG
GATGTGAAACAAAAAGGCTGAAAAAAAGAGTGTACATCTGTATACATTTA
TATATATATATATATATATATACATATCTGTATATAGATTTATATGTGTG
TGGGGAAGAAGAAATACCAAGCCAAACACTCACACACGATGAGATATTTC
AAAATGTAGCCGTGCGTGAGTGCGGGTCGGATTTTTCGATTTTCGATGGG
CATGGGTATGGATATGGGTATGGGTATGTGTGTGCGCCCCTCGCAGGCAT
TATAGGATTTAGTTTTTGGGATTTCGATTTCTCACACAGGGAGCGGGGTC
GCAAGAAATGTGTAGAACATATTGTTGCTGTTGGGTTGCGTTTCCGAAGA
TTTCCTGTGAAATACTTTAAGCCCAGAGCCTCCATCTCCAACTCCACTCC
ATTCGGTTTCGGTTTTTGGTTCTCTGGTTTTGATTCTGATTCCGATTCTG
ATTCTGTTTCGGCTTCGGCTTGTTTTGTTTTTTTTTCTGTGTTTTGGGTT
AAACATACTGCAAGCTTTCTAGACC

BO15714.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:40:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG31394-PA 546 CG31394-RA 1..543 17..559 2715 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-10 15:46:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:46:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10528421..10528963 559..17 2715 100 Minus
Blast to na_te.dros performed 2015-02-10 15:46:38
Subject Length Description Subject Range Query Range Score Percent Strand
transib2 2844 transib2 TRANSIB2 2844bp 2529..2568 479..518 119 77.5 Plus
transib2 2844 transib2 TRANSIB2 2844bp 2532..2565 488..521 107 79.4 Plus

BO15714.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:53:19 Download gff for BO15714.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31394-PA 1..546 17..562 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:58:09 Download gff for BO15714.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31394-PA 1..546 17..562 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:06:25 Download gff for BO15714.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 10528423..10528970 8..557 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:06:25 Download gff for BO15714.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 10528423..10528970 8..557 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-14 14:57:13 Download gff for BO15714.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6354145..6354692 8..557 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-14 14:57:13 Download gff for BO15714.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6354145..6354692 8..557 99   Minus

BO15714.complete Sequence

577 bp (577 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633558

> BO15714.complete
GAAGTTATCAGTCGACATGGGGCCAAAAAGGCACTGGGAACCTGGGTGGG
GATGTGAAACAAAAAGGCTGAAAAAAAGAGTGTACATCTGTATACATTTA
TATATATATATATATATATATACATATCTGTATATAGATTTATATGTGTG
TGGGGAAGAAGAAATACCAAGCCAAACACTCACACACGATGAGATATTTC
AAAATGTAGCCGTGCGTGAGTGCGGGTCGGATTTTTCGATTTTCGATGGG
CATGGGTATGGATATGGGTATGGGTATGTGTGTGCGCCCCTCGCAGGCAT
TATAGGATTTAGTTTTTGGGATTTCGATTTCTCACACAGGGAGCGGGGTC
GCAAGAAATGTGTAGAACATATTGTTGCTGTTGGGTTGCGTTTCCGAAGA
TTTCCTGTGAAATACTTTAAGCCCAGAGCCTCCATCTCCAACTCCACTCC
ATTCGGTTTCGGTTTTTGGTTCTCTGGTTTTGATTCTGATTCCGATTCTG
ATTCTGTTTCGGCTTCGGCTTGTTTTGTTTTTTTTTCTGTGTTTTGGGTT
AAACATACTGCAAGCTTTCTAGACCAT

BO15714.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 01:51:26 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 01:51:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:51:24
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10528421..10528963 559..17 2715 100 Minus
Blast to na_te.dros performed 2014-11-27 01:51:25
Subject Length Description Subject Range Query Range Score Percent Strand
transib2 2844 transib2 TRANSIB2 2844bp 2529..2568 479..518 119 77.5 Plus
transib2 2844 transib2 TRANSIB2 2844bp 2532..2565 488..521 107 79.4 Plus

BO15714.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 21:52:28 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2008-11-11 06:08:13 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 21:52:28 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:33:07 Download gff for BO15714.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10528418..10528963 17..561 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:33:07 Download gff for BO15714.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10528418..10528963 17..561 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:03:32 Download gff for BO15714.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6354140..6354685 17..561 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:03:32 Download gff for BO15714.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6354140..6354685 17..561 99   Minus

BO15714.pep Sequence

Translation from 16 to 577

> BO15714.pep
MGPKRHWEPGWGCETKRLKKRVYICIHLYIYIYIYTYLYIDLYVCGEEEI
PSQTLTHDEIFQNVAVRECGSDFSIFDGHGYGYGYGYVCAPLAGIIGFSF
WDFDFSHRERGRKKCVEHIVAVGLRFRRFPVKYFKPRASISNSTPFGFGF
WFSGFDSDSDSDSVSASACFVFFSVFWVKHTASFLDH
Sequence BO15714.pep has no blast hits.