BO15715.complete Sequence
1003 bp (1003 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633559
> BO15715.complete
GAAGTTATCAGTCGACATGTCTCTGGAGGATCCGTTTTTCGTGGTCAAGG
ACGAGGTATTCAAAGCTCTGAACAAAACCCGCGGCCTCTATCTGCGTTGG
CGGGAGCTGGGCGAGAACGGCGGAACGGAGGCTGAATGGACCACCACCGA
GCTGCGTAACTCGCTACGGAGCATCGAGTGGGATCTCGAGGACCTCGAGG
ACACTATCAGCATCGTTGAGAAGAATCCAAGCAAGTTTCGGATCGACAAC
CGCGAACTCTCCAGCCGGCGCCACTTCATCGACAACACTCGCGATGAGGT
CAAGCAGATGAAGGATAAGATGAGCCTGAACCGGAGCCGGGACAGAGACA
TCACCGCACACCAGCCGCTGCTCGACAACGATCGCCACAGCCCCAATCAC
AATCATTCCATTGCCATACCCAATTCGAATTCCAACTCCAACGAGTACCA
TCAGCATCCACACAACGATCGCACGTACCTCGTGGAGTGTCCCAACGGCA
ACTCGCTGATCAATAGCGGCAGTCAGGTGGCCAATACCATAGCTGGGACC
ATGTCGGCGGCAGCGGCAGCAGCATCCCGCCACAGCGGCACCAAGTACTC
CAAGCTGGAGAACGCCCTGGACAGTCCCAGTCACTATGGGCAGACGCATC
ACGGCGGCATGGACAGTCCGAGTCATAGGTACGTGGGCGAAACAGTGTCC
ATACAGCAGCGTATGATCCAGGGACAGGATGAGCAGCTAGACATGATCAG
CGATTCGATTGGTACCCTCAAGACGGTCTCGCGGCAAATTGGCGTTGAGC
TCGATGAGCAGGCCGTCATGCTAGACGACTTTGGGAACGAGTTCGATACC
ACGGAGTCCAAGTTGGATACGACCATGAAGAAAGTTGCCAAAGTCTTGCA
CATGAATAATGATAAACGACAGTGGGCCGCCATTCTCATCCTATCCGGAC
TGTTATTGTTTGTGATAATTTTGTTTATTATTTTGGCAAGCTTTCTAGAC
CAT
BO15715.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:13:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Syx6-RD | 972 | CG7736-PD | 1..969 | 17..985 | 4845 | 100 | Plus |
Syx6-RE | 1020 | CG7736-PE | 84..1017 | 52..985 | 4670 | 100 | Plus |
Syx6-RB | 681 | CG7736-PB | 1..678 | 308..985 | 3390 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:13:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Syx6-RD | 1982 | CG7736-RD | 390..1359 | 16..985 | 4850 | 100 | Plus |
Syx6-RB | 1361 | CG7736-RB | 175..1108 | 52..985 | 4670 | 100 | Plus |
Syx6-RE | 1945 | CG7736-RE | 531..1464 | 52..985 | 4670 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:13:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 11220928..11221629 | 210..911 | 3510 | 100 | Plus |
2R | 25286936 | 2R | 11220464..11220621 | 52..209 | 790 | 100 | Plus |
2R | 25286936 | 2R | 11221783..11221857 | 911..985 | 375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:13:43 has no hits.
BO15715.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:29 Download gff for
BO15715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Syx6-RD | 1..972 | 17..989 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:08:15 Download gff for
BO15715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Syx6-RD | 385..1368 | 13..995 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:54:48 Download gff for
BO15715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Syx6-RD | 391..1359 | 17..987 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:29 Download gff for
BO15715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Syx6-RD | 385..1368 | 13..995 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:13:47 Download gff for
BO15715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Syx6-RD | 391..1359 | 17..987 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:13:47 Download gff for
BO15715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11220324..11220358 | 17..51 | 100 | -> | Plus |
2R | 11220464..11220621 | 52..209 | 100 | -> | Plus |
2R | 11220928..11221629 | 210..911 | 100 | -> | Plus |
2R | 11221784..11221857 | 912..987 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:54:48 Download gff for
BO15715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7107969..7108126 | 52..209 | 100 | -> | Plus |
arm_2R | 7107829..7107863 | 17..51 | 100 | -> | Plus |
arm_2R | 7108433..7109134 | 210..911 | 100 | -> | Plus |
arm_2R | 7109289..7109362 | 912..987 | 97 | | Plus |
BO15715.pep Sequence
Translation from 16 to 1003
> BO15715.pep
MSLEDPFFVVKDEVFKALNKTRGLYLRWRELGENGGTEAEWTTTELRNSL
RSIEWDLEDLEDTISIVEKNPSKFRIDNRELSSRRHFIDNTRDEVKQMKD
KMSLNRSRDRDITAHQPLLDNDRHSPNHNHSIAIPNSNSNSNEYHQHPHN
DRTYLVECPNGNSLINSGSQVANTIAGTMSAAAAAASRHSGTKYSKLENA
LDSPSHYGQTHHGGMDSPSHRYVGETVSIQQRMIQGQDEQLDMISDSIGT
LKTVSRQIGVELDEQAVMLDDFGNEFDTTESKLDTTMKKVAKVLHMNNDK
RQWAAILILSGLLLFVIILFIILASFLDH
BO15715.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:00:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Syx6-PD | 323 | CG7736-PD | 1..323 | 1..323 | 1675 | 100 | Plus |
Syx6-PE | 339 | CG7736-PE | 29..339 | 13..323 | 1613 | 100 | Plus |
Syx6-PB | 226 | CG7736-PB | 1..226 | 98..323 | 1169 | 100 | Plus |