Clone BO15718 Report

Search the DGRC for BO15718

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:157
Well:18
Vector:pDNR-Dual
Associated Gene/TranscriptCG18480-RA
Protein status:BO15718.pep: validated full length
Sequenced Size:1684

Clone Sequence Records

BO15718.complete Sequence

1684 bp (1684 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633560

> BO15718.complete
GAAGTTATCAGTCGACATGGCTCTGCAATGTGTCACAAAACCCAAAATGT
GGTTGGGCCTTAAGCAGATACTTCTCTATGTAGGCCTGTTGCTCTGCGTT
CTTCTGCAGGTCTGCAGAAGCAAGACCCAGTCGCAGATGTTTTGCCCCAC
TGTTTGCCACTGTGATCTACACGCCCAGCGCAATCGCGCAGTATGCAGCG
CAAAGCGCTTGATAAGCGCCAATATAGAAATACCTACAACGGTTGAGCTG
TTGGACCTGAGCTACAATGATATAACCACCATTGACGATGACTCCTTCAA
AACCACAATCCACCTGCTTAATCTTACGTTGGCCCACAACGCGATACACA
CACTTTATGGGGATGCCTTTGTGGAGTTGACCAGACTACGCTACTTGGAT
CTATCGTACAATCGCCTGGAGCAGATCGATGAACATATCCTGGAATCCAA
CAACCAACTGATCCACCTTAATTTGGAAGGCAACAAGTTGTCCACATTGG
GAAAAGGACCTATATTAAGAAGTCCATCGCTACGCTCTCTCAATCTGCGC
AACTCGCAGGTAAATCAACTTGGAACCCAGCTTCTGAGTGCCTTGCCTCA
ATTGCGCCAACTGGATTTGGCACAGAATCTACTGTTAACCCTGAGTCCTG
GAGATTTTCATGCACCCCGCAATCTGGCGTCACTGAATGTTGAGGAAAAT
CCCTTCAACTGCGATCGGGCGTTAGCCAAAGTGGCCACTGGATTGCGACA
GCGCGGAGTGGCTATTTTCATGAGCAACTGCATGGAAGAAGAGGTTCAGG
ATCACCAGGACGATGCGGAAGCTGTGAATTTTCCTAATAAAAACGAGAAG
TTCGAAAGCATGGAGTACTTGGAGCCCAGCACCCGAGGACCCCAATCCGT
GCTGTCCGTCTGGCGGGATCTGGACTCCAGTGAGGAGCAGAACAGCTCGC
AGGACGACGAGCAGATGTCATCGCTAAGCGATGTGTGTGAGGGAAGTCGG
GAGAAACTGTGCCTAAGATACCGCATTTGCTTGGAGCGTGTGAGTCATGA
ACTCCTGGCTGGCGGAAACTCCCAATTGGAAGATGAAATCATACGCACGC
ACACCTACGATGAGGATGATTTGAAGCTGGCCTTTGTGGTGGGCGGTGCC
ACGGGCGTTTGCATGGTCATCTTCATCATTACCTTTGCCCTGTGCCTCAA
GAGTTGCTGTGAGATGCGCAAAAAGAAAAGTAACCCGGAAGTGGCCACTG
GGGTTTCAGCTCCTCTGAACCCTTCGCAGGATAGCCTACCCACTATACAC
ACCTGGTCACCACAGCGTACGCGCAACCCCAGGCGCTCTAATCCCCAGCG
TCCCCGTAGTACTCAATCGCATGCCGTGGTTCGACAACCCTACGGACCGC
AGGACAACTTCGTGTCCCGGCTCTTTGGTCGTCCGGCCCGCAGTCAGTAC
TACCGGACCATCAATCAGAATACGGCCACCCTCATAAGGCGCCTTAGTCG
GAGTAACCTCTTCACCAGTCGCGACCGGGAACCGAGTTCCCCCGCCGAAC
CGCCAACTTCTACGGCCAGATTCTACACGGATGTGATTGAAAGTGGGGCG
ATACGACCGGAGACACCGCCTCCAAACTACGGCGATGTGGTGGTCATCGA
GAATTGTGATAACAAGGCAAGCTTTCTAGACCAT

BO15718.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:38:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG18480-RC 1653 CG18480-PC 1..1650 17..1666 8250 100 Plus
CG18480-RB 1653 CG18480-PB 1..1650 17..1666 8250 100 Plus
CG18480-RA 1653 CG18480-PA 1..1650 17..1666 8250 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:38:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG18480-RC 4656 CG18480-RC 111..1760 17..1666 8250 100 Plus
CG18480-RB 2754 CG18480-RB 192..1841 17..1666 8250 100 Plus
CG18480-RA 2287 CG18480-RA 111..1760 17..1666 8250 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:38:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15630661..15631618 302..1259 4790 100 Plus
2L 23513712 2L 15631682..15632091 1257..1666 2050 100 Plus
2L 23513712 2L 15630193..15630374 17..198 910 100 Plus
2L 23513712 2L 15630436..15630543 194..301 540 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:38:01 has no hits.

BO15718.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:30 Download gff for BO15718.complete
Subject Subject Range Query Range Percent Splice Strand
CG18480-RA 1..1653 17..1669 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:08:17 Download gff for BO15718.complete
Subject Subject Range Query Range Percent Splice Strand
CG18480-RA 103..1764 8..1671 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:12:24 Download gff for BO15718.complete
Subject Subject Range Query Range Percent Splice Strand
CG18480-RA 111..1760 17..1668 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:30 Download gff for BO15718.complete
Subject Subject Range Query Range Percent Splice Strand
CG18480-RA 103..1764 8..1671 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:25:20 Download gff for BO15718.complete
Subject Subject Range Query Range Percent Splice Strand
CG18480-RA 111..1760 17..1668 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:25:20 Download gff for BO15718.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15630193..15630374 17..198 100 -> Plus
2L 15630441..15630543 199..301 100 -> Plus
2L 15630661..15631618 302..1259 100 -> Plus
2L 15631685..15632091 1260..1668 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:12:24 Download gff for BO15718.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15630193..15630374 17..198 100 -> Plus
arm_2L 15630441..15630543 199..301 100 -> Plus
arm_2L 15630661..15631618 302..1259 100 -> Plus
arm_2L 15631685..15632091 1260..1668 99   Plus

BO15718.pep Sequence

Translation from 16 to 1684

> BO15718.pep
MALQCVTKPKMWLGLKQILLYVGLLLCVLLQVCRSKTQSQMFCPTVCHCD
LHAQRNRAVCSAKRLISANIEIPTTVELLDLSYNDITTIDDDSFKTTIHL
LNLTLAHNAIHTLYGDAFVELTRLRYLDLSYNRLEQIDEHILESNNQLIH
LNLEGNKLSTLGKGPILRSPSLRSLNLRNSQVNQLGTQLLSALPQLRQLD
LAQNLLLTLSPGDFHAPRNLASLNVEENPFNCDRALAKVATGLRQRGVAI
FMSNCMEEEVQDHQDDAEAVNFPNKNEKFESMEYLEPSTRGPQSVLSVWR
DLDSSEEQNSSQDDEQMSSLSDVCEGSREKLCLRYRICLERVSHELLAGG
NSQLEDEIIRTHTYDEDDLKLAFVVGGATGVCMVIFIITFALCLKSCCEM
RKKKSNPEVATGVSAPLNPSQDSLPTIHTWSPQRTRNPRRSNPQRPRSTQ
SHAVVRQPYGPQDNFVSRLFGRPARSQYYRTINQNTATLIRRLSRSNLFT
SRDREPSSPAEPPTSTARFYTDVIESGAIRPETPPPNYGDVVVIENCDNK
ASFLDH

BO15718.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:00:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG18480-PC 550 CG18480-PC 1..550 1..550 2860 100 Plus
CG18480-PB 550 CG18480-PB 1..550 1..550 2860 100 Plus
CG18480-PA 550 CG18480-PA 1..550 1..550 2860 100 Plus
sli-PE 1504 CG43758-PE 73..270 43..244 255 33.7 Plus
sli-PC 1504 CG43758-PC 73..270 43..244 255 33.7 Plus
sli-PE 1504 CG43758-PE 319..523 43..280 162 26.1 Plus