BO15718.complete Sequence
1684 bp (1684 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633560
> BO15718.complete
GAAGTTATCAGTCGACATGGCTCTGCAATGTGTCACAAAACCCAAAATGT
GGTTGGGCCTTAAGCAGATACTTCTCTATGTAGGCCTGTTGCTCTGCGTT
CTTCTGCAGGTCTGCAGAAGCAAGACCCAGTCGCAGATGTTTTGCCCCAC
TGTTTGCCACTGTGATCTACACGCCCAGCGCAATCGCGCAGTATGCAGCG
CAAAGCGCTTGATAAGCGCCAATATAGAAATACCTACAACGGTTGAGCTG
TTGGACCTGAGCTACAATGATATAACCACCATTGACGATGACTCCTTCAA
AACCACAATCCACCTGCTTAATCTTACGTTGGCCCACAACGCGATACACA
CACTTTATGGGGATGCCTTTGTGGAGTTGACCAGACTACGCTACTTGGAT
CTATCGTACAATCGCCTGGAGCAGATCGATGAACATATCCTGGAATCCAA
CAACCAACTGATCCACCTTAATTTGGAAGGCAACAAGTTGTCCACATTGG
GAAAAGGACCTATATTAAGAAGTCCATCGCTACGCTCTCTCAATCTGCGC
AACTCGCAGGTAAATCAACTTGGAACCCAGCTTCTGAGTGCCTTGCCTCA
ATTGCGCCAACTGGATTTGGCACAGAATCTACTGTTAACCCTGAGTCCTG
GAGATTTTCATGCACCCCGCAATCTGGCGTCACTGAATGTTGAGGAAAAT
CCCTTCAACTGCGATCGGGCGTTAGCCAAAGTGGCCACTGGATTGCGACA
GCGCGGAGTGGCTATTTTCATGAGCAACTGCATGGAAGAAGAGGTTCAGG
ATCACCAGGACGATGCGGAAGCTGTGAATTTTCCTAATAAAAACGAGAAG
TTCGAAAGCATGGAGTACTTGGAGCCCAGCACCCGAGGACCCCAATCCGT
GCTGTCCGTCTGGCGGGATCTGGACTCCAGTGAGGAGCAGAACAGCTCGC
AGGACGACGAGCAGATGTCATCGCTAAGCGATGTGTGTGAGGGAAGTCGG
GAGAAACTGTGCCTAAGATACCGCATTTGCTTGGAGCGTGTGAGTCATGA
ACTCCTGGCTGGCGGAAACTCCCAATTGGAAGATGAAATCATACGCACGC
ACACCTACGATGAGGATGATTTGAAGCTGGCCTTTGTGGTGGGCGGTGCC
ACGGGCGTTTGCATGGTCATCTTCATCATTACCTTTGCCCTGTGCCTCAA
GAGTTGCTGTGAGATGCGCAAAAAGAAAAGTAACCCGGAAGTGGCCACTG
GGGTTTCAGCTCCTCTGAACCCTTCGCAGGATAGCCTACCCACTATACAC
ACCTGGTCACCACAGCGTACGCGCAACCCCAGGCGCTCTAATCCCCAGCG
TCCCCGTAGTACTCAATCGCATGCCGTGGTTCGACAACCCTACGGACCGC
AGGACAACTTCGTGTCCCGGCTCTTTGGTCGTCCGGCCCGCAGTCAGTAC
TACCGGACCATCAATCAGAATACGGCCACCCTCATAAGGCGCCTTAGTCG
GAGTAACCTCTTCACCAGTCGCGACCGGGAACCGAGTTCCCCCGCCGAAC
CGCCAACTTCTACGGCCAGATTCTACACGGATGTGATTGAAAGTGGGGCG
ATACGACCGGAGACACCGCCTCCAAACTACGGCGATGTGGTGGTCATCGA
GAATTGTGATAACAAGGCAAGCTTTCTAGACCAT
BO15718.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:38:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18480-RC | 1653 | CG18480-PC | 1..1650 | 17..1666 | 8250 | 100 | Plus |
CG18480-RB | 1653 | CG18480-PB | 1..1650 | 17..1666 | 8250 | 100 | Plus |
CG18480-RA | 1653 | CG18480-PA | 1..1650 | 17..1666 | 8250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:38:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18480-RC | 4656 | CG18480-RC | 111..1760 | 17..1666 | 8250 | 100 | Plus |
CG18480-RB | 2754 | CG18480-RB | 192..1841 | 17..1666 | 8250 | 100 | Plus |
CG18480-RA | 2287 | CG18480-RA | 111..1760 | 17..1666 | 8250 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:38:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 15630661..15631618 | 302..1259 | 4790 | 100 | Plus |
2L | 23513712 | 2L | 15631682..15632091 | 1257..1666 | 2050 | 100 | Plus |
2L | 23513712 | 2L | 15630193..15630374 | 17..198 | 910 | 100 | Plus |
2L | 23513712 | 2L | 15630436..15630543 | 194..301 | 540 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:38:01 has no hits.
BO15718.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:30 Download gff for
BO15718.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18480-RA | 1..1653 | 17..1669 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:08:17 Download gff for
BO15718.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18480-RA | 103..1764 | 8..1671 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:12:24 Download gff for
BO15718.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18480-RA | 111..1760 | 17..1668 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:30 Download gff for
BO15718.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18480-RA | 103..1764 | 8..1671 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:25:20 Download gff for
BO15718.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18480-RA | 111..1760 | 17..1668 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:25:20 Download gff for
BO15718.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 15630193..15630374 | 17..198 | 100 | -> | Plus |
2L | 15630441..15630543 | 199..301 | 100 | -> | Plus |
2L | 15630661..15631618 | 302..1259 | 100 | -> | Plus |
2L | 15631685..15632091 | 1260..1668 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:12:24 Download gff for
BO15718.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 15630193..15630374 | 17..198 | 100 | -> | Plus |
arm_2L | 15630441..15630543 | 199..301 | 100 | -> | Plus |
arm_2L | 15630661..15631618 | 302..1259 | 100 | -> | Plus |
arm_2L | 15631685..15632091 | 1260..1668 | 99 | | Plus |
BO15718.pep Sequence
Translation from 16 to 1684
> BO15718.pep
MALQCVTKPKMWLGLKQILLYVGLLLCVLLQVCRSKTQSQMFCPTVCHCD
LHAQRNRAVCSAKRLISANIEIPTTVELLDLSYNDITTIDDDSFKTTIHL
LNLTLAHNAIHTLYGDAFVELTRLRYLDLSYNRLEQIDEHILESNNQLIH
LNLEGNKLSTLGKGPILRSPSLRSLNLRNSQVNQLGTQLLSALPQLRQLD
LAQNLLLTLSPGDFHAPRNLASLNVEENPFNCDRALAKVATGLRQRGVAI
FMSNCMEEEVQDHQDDAEAVNFPNKNEKFESMEYLEPSTRGPQSVLSVWR
DLDSSEEQNSSQDDEQMSSLSDVCEGSREKLCLRYRICLERVSHELLAGG
NSQLEDEIIRTHTYDEDDLKLAFVVGGATGVCMVIFIITFALCLKSCCEM
RKKKSNPEVATGVSAPLNPSQDSLPTIHTWSPQRTRNPRRSNPQRPRSTQ
SHAVVRQPYGPQDNFVSRLFGRPARSQYYRTINQNTATLIRRLSRSNLFT
SRDREPSSPAEPPTSTARFYTDVIESGAIRPETPPPNYGDVVVIENCDNK
ASFLDH
BO15718.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:00:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18480-PC | 550 | CG18480-PC | 1..550 | 1..550 | 2860 | 100 | Plus |
CG18480-PB | 550 | CG18480-PB | 1..550 | 1..550 | 2860 | 100 | Plus |
CG18480-PA | 550 | CG18480-PA | 1..550 | 1..550 | 2860 | 100 | Plus |
sli-PE | 1504 | CG43758-PE | 73..270 | 43..244 | 255 | 33.7 | Plus |
sli-PC | 1504 | CG43758-PC | 73..270 | 43..244 | 255 | 33.7 | Plus |
sli-PE | 1504 | CG43758-PE | 319..523 | 43..280 | 162 | 26.1 | Plus |