BO15720.complete Sequence
2299 bp assembled on 2006-10-11
GenBank Submission: FJ633561
> BO15720.complete
GAAGTTATCAGTCGACATGGAGGACATCTTGGGCGTGCTGGGCTCGCTTT
CGGACCTGCGCAGGGAGCTCGAGGTCCTGCGCAAGGCCCACTTTGAGGAG
CTGGACCACCTCTTCTACGGCACAGGCCAGCCGGAGGCGGAGGCCAAACC
GAGGGACAGTGCTCCGGCAGCGAAGAGTCAGGAGAACTCTTCGGTGACGC
CGCAGCAAACGAAAAAGCGCCCCAAGCGACTCACCTCACTGGCCGAGGAT
CAGAATGAGCCCGAGGCTCCAGACGCCACGGCCAACAACACGTCGGCCCG
TCAAAGCACTCGGGTCAGCAACTCCCAGTTGCTGGCTATCGCCGAGGACG
AGCACAACTCCACGGCCTCGCTGATGCCGCCTCCGCCTGTGCCCGTCTCG
GCGGACACCACCCTCGGCTCCGGAAGGCCACAGCGAGCCGCTAAGCTGAA
GACCGAGAAATTACTCAAGGAGCCCTCACTCAACCGTAAGATGCGGCGGC
CCAGCAGCGAGGAGCTCGTAAAGGTCAAGGTTGAGAGCGAGCAGCGAGTC
TCCCAGTTTAACAGCTTCACCAGTGCACAGGCGTTAGAGGAAAATAAACT
AGCGGAGCCGGAACTAGAAGAGCCAGCAGCAGAAACAGCTGAGCAGCAAA
AGCCTCCGGAGGAGGCCTCAGTCACAGAGGACGTGAACACCACGAAGACA
CTCCGCGTGAAGGTAAAGCGCGAGAAACTCAGTACCGAAGCAGTGCCCCC
GTTAACCAATGCGGTCTCCACGGCAAATGTGACCACCGTCTCCTCTGTAA
CAACGGAGGCAGCGCGACCGGACGATACGGTGGCCAGCAACACGACGACA
TCCACGGAGGTCTCCAAGAAGGTCCGCAAGAAGAAGAAGGACGTGGAAAG
CCACCGACCCATAAAGGTGGAACGATTCAGCGACCTGGACAAGAGCTCGC
CAGTCTCGTCGCGCACGCGCAAGTGTAGCAGCGATTCGCGAACGGTTCAG
GAGCGATCCATATACAAGGATGCACTCGAAGATCCGCCCGTTGCAGAGCA
ATCAGTGGCTGCAGTTGCTCCGGCTGCTGTCAATGAGACCGTGGCGATTT
CCAACGCCACCCTCGTACTGGGTCCTGCGCCGACGAGCGATAGTCCAATA
GGACCAGCTGGAGATGCCACTTTTGAGGTGCACTCCAACGACAAGAAACA
ACCTCTGAGTAAGCAGGACAGCCTCTTAACGGAGGACGAGTCGGTGGAGG
AGAAGCTGCCGACGACCAAGCTGCTCTCGAGCATAAAGGCTATAAAACTG
CCTACCCGTACACATGAGCTTTTCAACCCACTGCTTCAGAGTCCAGTGAA
AATGCGCGTGGAGGCGTTCGAGAATGCGGCAAACGCACAGAACAGCATGC
GCCCTAAGCGGGGAAAAGATCTGCAGGGCACGCCAGGATCAAACAACACT
CCCAAAATTGGCAAGCTGCCTGCTCCGACTGTTGGTCGCTTTTTCACACC
GACTCAAACGACAAGCACACTACCATTAAGCTCGGCGCAGCCCAAGAAGG
GACCTGCCAGCGCGTCTAAGGCCACTAGTCTGCTGAAGACGGCCACCGGT
ACGAACCTAAGGTCGGTCAATTCCACGTCCACAAAAACGCTGTCGCGCGA
GAACAGCGGAGACGACTTCCGCAAGGGCCTGCACAATCTGGCGGAGGAGC
GCAAGAAGCTGCGTGAGCAAAAGCACCAGCAGGCTGCCCAGCAGCGCGAA
GCCAAGGAGCGGGAGCGGGCAGAGCGTATGGCCAAGCTGGCCGCCGAGCG
CGCCAAGAAGCAGGAGGAGCGAAAGCGAATTGAAGAGCGCAAACGACAAG
AGCTGGAGGAGCTGCAGCGGAAGATGCGCCAGCAAGAGGAAGCCGAGGCG
CTCAAGAAGGCCAAGTTCAAGGAGCTGGAGCAGCAGAAACTGCAGCAGCT
AACCGGCGCCAAGCCCAAGAAGATGCTTCCGCCGCCGCCGAAAACCAAGT
ACACCTGGGAGATGCTGCACGAAGACGACTCGACAGACGACGAGGGAAAG
GTCACCCACAAGCGTCCCCCAGCGCCCACCTGGAGTCGAAGCCACGTAAG
GGGAGAGGCAATTGCTATGCAGAGCCACTGCCCAACCGACATCATCGACA
GCTTTTTCTCGGTGGCGCCCACCACACCGGACCTAAAGCAGATATTCCCG
AACATCGATCCCAGCCAGCTGAAGCGAAACTCCAGCGTGCTGTGGTCCAC
GCCGCCGCGCTATTCCGAGCTGCCGAAATACGCAAGCTTTCTAGACCAT
BO15720.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:25:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Incenp-RB | 2268 | CG12165-PB | 1..2265 | 17..2281 | 11325 | 100 | Plus |
| Incenp-RA | 2268 | CG12165-PA | 1..2265 | 17..2281 | 11325 | 100 | Plus |
| Incenp-RC | 2265 | CG12165-PC | 1..2262 | 17..2281 | 11245 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:25:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Incenp-RB | 2459 | CG12165-RB | 124..2388 | 17..2281 | 11325 | 100 | Plus |
| Incenp-RA | 2699 | CG12165-RA | 124..2388 | 17..2281 | 11325 | 100 | Plus |
| Incenp-RC | 2595 | CG12165-RC | 263..2524 | 17..2281 | 11245 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:25:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7279106..7280166 | 266..1326 | 5305 | 100 | Plus |
| 2R | 25286936 | 2R | 7280470..7281138 | 1423..2091 | 3345 | 100 | Plus |
| 2R | 25286936 | 2R | 7281294..7281484 | 2091..2281 | 955 | 100 | Plus |
| 2R | 25286936 | 2R | 7278859..7279041 | 84..266 | 915 | 100 | Plus |
| 2R | 25286936 | 2R | 7280230..7280326 | 1327..1423 | 485 | 100 | Plus |
| 2R | 25286936 | 2R | 7278729..7278798 | 17..86 | 350 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:25:12 has no hits.
BO15720.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:31:53 Download gff for
BO15720.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Incenp-RA | 1..2268 | 17..2282 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:51:26 Download gff for
BO15720.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Incenp-RA | 263..2527 | 17..2283 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:28 Download gff for
BO15720.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Incenp-RA | 263..2527 | 17..2283 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:31:53 Download gff for
BO15720.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Incenp-RA | 254..2531 | 8..2287 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:17:47 Download gff for
BO15720.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Incenp-RA | 124..2388 | 17..2283 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:17:47 Download gff for
BO15720.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7281294..7281484 | 2091..2283 | 98 | | Plus |
| 2R | 7278729..7278797 | 17..85 | 100 | -> | Plus |
| 2R | 7278861..7279041 | 86..266 | 100 | -> | Plus |
| 2R | 7279107..7280166 | 267..1326 | 100 | -> | Plus |
| 2R | 7280230..7280326 | 1327..1423 | 100 | -> | Plus |
| 2R | 7280471..7281137 | 1424..2090 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:28 Download gff for
BO15720.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3166234..3166302 | 17..85 | 100 | -> | Plus |
| arm_2R | 3166366..3166546 | 86..266 | 100 | -> | Plus |
| arm_2R | 3166612..3167671 | 267..1326 | 100 | -> | Plus |
| arm_2R | 3167735..3167831 | 1327..1423 | 100 | -> | Plus |
| arm_2R | 3167976..3168642 | 1424..2090 | 100 | -> | Plus |
| arm_2R | 3168799..3168989 | 2091..2283 | 98 | | Plus |
BO15720.pep Sequence
Translation from 16 to 2299
> BO15720.pep
MEDILGVLGSLSDLRRELEVLRKAHFEELDHLFYGTGQPEAEAKPRDSAP
AAKSQENSSVTPQQTKKRPKRLTSLAEDQNEPEAPDATANNTSARQSTRV
SNSQLLAIAEDEHNSTASLMPPPPVPVSADTTLGSGRPQRAAKLKTEKLL
KEPSLNRKMRRPSSEELVKVKVESEQRVSQFNSFTSAQALEENKLAEPEL
EEPAAETAEQQKPPEEASVTEDVNTTKTLRVKVKREKLSTEAVPPLTNAV
STANVTTVSSVTTEAARPDDTVASNTTTSTEVSKKVRKKKKDVESHRPIK
VERFSDLDKSSPVSSRTRKCSSDSRTVQERSIYKDALEDPPVAEQSVAAV
APAAVNETVAISNATLVLGPAPTSDSPIGPAGDATFEVHSNDKKQPLSKQ
DSLLTEDESVEEKLPTTKLLSSIKAIKLPTRTHELFNPLLQSPVKMRVEA
FENAANAQNSMRPKRGKDLQGTPGSNNTPKIGKLPAPTVGRFFTPTQTTS
TLPLSSAQPKKGPASASKATSLLKTATGTNLRSVNSTSTKTLSRENSGDD
FRKGLHNLAEERKKLREQKHQQAAQQREAKERERAERMAKLAAERAKKQE
ERKRIEERKRQELEELQRKMRQQEEAEALKKAKFKELEQQKLQQLTGAKP
KKMLPPPPKTKYTWEMLHEDDSTDDEGKVTHKRPPAPTWSRSHVRGEAIA
MQSHCPTDIIDSFFSVAPTTPDLKQIFPNIDPSQLKRNSSVLWSTPPRYS
ELPKYASFLDH
BO15720.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:54:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Incenp-PB | 755 | CG12165-PB | 1..755 | 1..755 | 3801 | 100 | Plus |
| Incenp-PA | 755 | CG12165-PA | 1..755 | 1..755 | 3801 | 100 | Plus |
| Incenp-PC | 754 | CG12165-PC | 1..754 | 1..755 | 3784 | 99.9 | Plus |
| Muc68D-PB | 1514 | CG6004-PB | 325..917 | 42..690 | 206 | 19.3 | Plus |
| Muc30E-PC | 1702 | CG33300-PC | 380..1031 | 50..692 | 196 | 17.2 | Plus |
