BO15722.complete Sequence
2050 bp assembled on 2010-07-15
GenBank Submission: KX794719
> BO15722.complete
GAAGTTATCAGTCGACATGGCCAACTCCAAGCGAAAGCTGCCCACGAAAC
CCAGTGCCACAGAGGACGCTACTCCGCACAAAGATACACCTAGGTCGTCG
GAAGAATTCCCCACAGATGTAAATCACAAGAGTGCCAAGAAGTCCTTCCT
TCCTCAAAACGCATTCTTTCGAGATTGCCTCGGTCACGATCTGAGCAACT
TCACTAGCCTGACCAACTTTACCAGCTGGCTAAACAGACCCGTAGATGGA
GCTGCCCTGGGCATCTTCCGTCTGCTCTACGGAGCAGCCATGCTGATTGA
CATCGCAGAGGAGCGAGGTGGCGGCCAGCTGGACGTGCGGTTTCAGGAGC
CGCTACACTGCCACTTTCCACTGTTCAACGGGATGCGAGCATTGGACTAT
CCACTGATGGGCTGCGTCTATCTGTGCATGTGGCTGGGCGCGTGGGGCAT
CATGCTGGGCTATCGATTCAGGACTAGCTGCCTGGCCTTCCTGATACCCT
ACTGGTACATCTTCCTGCTGGACAAACCGACGTGGAATAACCACAGCTAT
CTATTCGGCCTGGTGGGAACATTGCTGCTCTTCACCCAAGCGGAGTCCTA
CTGCTCCCTGGACAGATGGCTAAATCCCCGAAAGAGTCACTGTATTCCCT
ACTGGAACTACTTCCTAATCAAATTCCAGTTCTTCATCCTGTACATGTAC
GCAGGTCTGAAGAAATTCTCGCTGGAATGGCTATCGGGATACGCGATGTC
CAATCTGAGTTACCACTGGGTCTTTGCCCCGTTCCGGCAAGTGATTGATC
CGGAGCTGATAGACCTGCTCATCGTGCATTGGTTCACCGCCTTCTTCGAC
GTGTCCATTGCTTTTTTCATGACTCTGGAAAAGACGCGCCTACTGGTCAC
TCCTTTCATGCTCAGTTTTCATCTAATGAACTCCCGACTGTTTGTAATAG
GCATGTTTCCCTGGGTGTGTCTGGCCGAAGTGCCGCTCTTCTTCAGCTTC
GACTGGCCGAGGAGGCTAGGCAACTGGTCCAAAATACAGGACGTCCATCC
AAAAGATCCAGAGGAAGAGCTTTCCAAGCCGGGAATCCTGGCCAGACTGC
GCACGGGCCTCATCCTTGCCTACTGTGGACTGCAACTCTTCCTGCCATAC
TCACACTTCATCACCAAGGGCTATAACAACTGGACGAATGGGCTGTACGG
CTACTCATGGGACATGATGGTGCACTCCTACGACACGCTGCAGACCTCCA
TTCAGGTGGTGGACAACGAGAGCCGCCAAGTGCACAACCTGAATCCATAC
GCCTTTACGGAGTACGACCGCTGGACGAAGTACGCCGACATGGCAGTGCA
GTATGCCAGGTGCATCGAGGAGAATTTACAAGAGAAACAGCCACATATTG
GGAGGAACATTTCCATCTACTTCGACATCTGGTGCTCCATGAACGGACGC
TTTCAGCAACGATCATTCGATCCACGCGAGGATCTCCTCCGGGCCAAGTG
GTCGCCCTTTGAGAGCACCTCCTGGTCGCTGCCTCTGCTGAACGAGCTGA
ACCACATGCGGCCCAAATTGCGCACCATTGAGACTGAGGTGCTGGCCTGG
AACAACTACTCCGATGTCATTTTCGTGGCGGATTTCCCGGGACTAACTCT
GACCAACTTCATCTCGCCGGACCTTATCAACTGCACGCTGACCATTCTTG
AGGGAAATGTTCGGTACCGGAACGAGCGGGATCCGGAGGCCTATTTCCTG
ACAGCCGGCAAGAGCATCGGTCTGGAGAGCAACATCACCCACTTGGTCAC
CACCATTGGCCAGAAGCCAGCTTCGTATCTGTTCACATACACCAACAAAA
CGATGCTGGAGCAGGGCATCACGATAGAACAGCCTGATACCGAGGAGCGG
TCTGTCCTGCCGCTGTGGCAGGAGTTCCAGCATCGGGTTACCAACTACCA
GCAGTTTTTGGGCCACATTGGCAACTGCCTAATGTACTTGCTCTACGATG
TGCCCATTCCGCAGGCCGTAAAGGGGGGAGATGCAAGCTTTCTAGACCAT
BO15722.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:30:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GC-RB | 2019 | CG13927-PB | 1..2016 | 17..2032 | 10080 | 100 | Plus |
| GC-RA | 2019 | CG13927-PA | 1..2016 | 17..2032 | 10080 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:30:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GC-RB | 2382 | CG13927-RB | 30..2045 | 17..2032 | 10080 | 100 | Plus |
| GC-RA | 2673 | CG13927-RA | 321..2336 | 17..2032 | 10080 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:30:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1623516..1624599 | 2032..949 | 5420 | 100 | Minus |
| 3L | 28110227 | 3L | 1625075..1625661 | 603..17 | 2935 | 100 | Minus |
| 3L | 28110227 | 3L | 1624669..1625017 | 951..603 | 1745 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:30:52 has no hits.
BO15722.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-15 09:42:11 Download gff for
BO15722.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GC-RA | 318..2333 | 17..2034 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:51 Download gff for
BO15722.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GC-RA | 321..2336 | 17..2034 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:30:41 Download gff for
BO15722.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GC-RA | 321..2336 | 17..2034 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:30:41 Download gff for
BO15722.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1623513..1624597 | 951..2034 | 99 | <- | Minus |
| 3L | 1624670..1625016 | 604..950 | 100 | <- | Minus |
| 3L | 1625075..1625661 | 17..603 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:51 Download gff for
BO15722.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1623513..1624597 | 951..2034 | 99 | <- | Minus |
| arm_3L | 1624670..1625016 | 604..950 | 100 | <- | Minus |
| arm_3L | 1625075..1625661 | 17..603 | 100 | | Minus |
BO15722.pep Sequence
Translation from 16 to 2050
> BO15722.pep
MANSKRKLPTKPSATEDATPHKDTPRSSEEFPTDVNHKSAKKSFLPQNAF
FRDCLGHDLSNFTSLTNFTSWLNRPVDGAALGIFRLLYGAAMLIDIAEER
GGGQLDVRFQEPLHCHFPLFNGMRALDYPLMGCVYLCMWLGAWGIMLGYR
FRTSCLAFLIPYWYIFLLDKPTWNNHSYLFGLVGTLLLFTQAESYCSLDR
WLNPRKSHCIPYWNYFLIKFQFFILYMYAGLKKFSLEWLSGYAMSNLSYH
WVFAPFRQVIDPELIDLLIVHWFTAFFDVSIAFFMTLEKTRLLVTPFMLS
FHLMNSRLFVIGMFPWVCLAEVPLFFSFDWPRRLGNWSKIQDVHPKDPEE
ELSKPGILARLRTGLILAYCGLQLFLPYSHFITKGYNNWTNGLYGYSWDM
MVHSYDTLQTSIQVVDNESRQVHNLNPYAFTEYDRWTKYADMAVQYARCI
EENLQEKQPHIGRNISIYFDIWCSMNGRFQQRSFDPREDLLRAKWSPFES
TSWSLPLLNELNHMRPKLRTIETEVLAWNNYSDVIFVADFPGLTLTNFIS
PDLINCTLTILEGNVRYRNERDPEAYFLTAGKSIGLESNITHLVTTIGQK
PASYLFTYTNKTMLEQGITIEQPDTEERSVLPLWQEFQHRVTNYQQFLGH
IGNCLMYLLYDVPIPQAVKGGDASFLDH
BO15722.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:23:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GC-PB | 672 | CG13927-PB | 1..672 | 1..672 | 3666 | 100 | Plus |
| GC-PA | 672 | CG13927-PA | 1..672 | 1..672 | 3666 | 100 | Plus |
