BO15731.complete Sequence
1096 bp (1096 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633564
> BO15731.complete
GAAGTTATCAGTCGACATGCGTCTGCTACTCAGAAATTATTCCCTAATGG
AGGCCGTCAAAAGATTGCTGCCGAGACCGCGCAAAAAAATCTACAATCTA
GGCGCTTGCTTCGAACTGGTGGATATTCCTAAGATATCCTACAATCCCAG
CGAGCTCTCCGAGCCCCGATTCCTGGAGTACAGCAATCTATCCGATAAGC
TACACCTAAGGGAAGCCATTGACAAAATCCTTATACCTCGAGTTGTGGGC
ACAACAAATCATAGCATCGTTCGAGAATACATCGTCCAGAGTTTGAGGGA
TCTAGACTGGGATGTGGAAGTAAACAGCTTTCATGATCACGCTCCCATCA
AAGGCAAATTGCATTTCCACAACATCATCGCCACCCTGAATCCAAATGCT
GAGAGATATCTGGTGCTGTCCTGCCATTATGATAGCAAATACATGCCTGG
AGTGGAATTCCTGGGGGCCACCGACTCGGCAGTGCCCTGTGCCATGCTCC
TCAACCTGGCCCAGGTGCTTCAGGAGCAGTTGAAACCCCTCAAGAAGAGC
AAACTGAGTTTGATGCTCTTGTTCTTCGATGGCGAGGAGGCTTTTGAGGA
GTGGGGACCCAAGGACTCCATCTATGGAGCACGACACCTGGCCAAAAAGT
GGCACCATGAAGGAAAACTTGATAGAATAGATATGCTGGTGCTCCTGGAT
CTGTTGGGAGCCCCCGATCCGGCATTCTACAGCTTCTTCGAAAACACCGA
GTCCTGGTACATGCGTATCCAGTCCGTGGAGACACGTCTTGCCAAGTTGC
AGCTCCTGGAGCGCTATGCCAGTAGTGGAGTTGCCCAGCGCGACCCCACC
CGCTACTTCCAGTCGCAGGCCATGCGATCCTCTTTCATCGAGGACGATCA
CATACCCTTCCTGCGGCGAAATGTGCCGATCTTGCACCTCATTCCGGTGC
CCTTTCCCAGTGTATGGCATACGCCCGACGATAACGCCAGCGTGATCGAT
TATGCGACGACGGACAACCTGGCACTGATTATACGGCTCTTCGCTTTGGA
GTATCTGCTGGCCGGAACCGAGGCCAAGGCAAGCTTTCTAGACCAT
BO15731.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:21:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| isoQC-RB | 1065 | CG5976-PB | 1..1062 | 17..1078 | 5280 | 99.8 | Plus |
| isoQC-RA | 1059 | CG5976-PA | 110..1056 | 132..1078 | 4705 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:21:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| isoQC-RB | 1617 | CG5976-RB | 62..1123 | 17..1078 | 5280 | 99.8 | Plus |
| isoQC-RA | 1975 | CG5976-RA | 535..1481 | 132..1078 | 4705 | 99.8 | Plus |
| CG5969-RA | 947 | CG5969-RA | 683..799 | 17..133 | 585 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:21:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20475563..20476509 | 132..1078 | 4705 | 99.8 | Plus |
| 3L | 28110227 | 3L | 20474527..20474643 | 17..133 | 585 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:21:41 has no hits.
BO15731.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:31 Download gff for
BO15731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5976-RB | 1..1065 | 17..1079 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:08:19 Download gff for
BO15731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5976-RB | 53..1126 | 7..1079 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:58:52 Download gff for
BO15731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| isoQC-RB | 62..1123 | 17..1080 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:31 Download gff for
BO15731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5976-RB | 53..1126 | 7..1079 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:17:13 Download gff for
BO15731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| isoQC-RB | 62..1123 | 17..1080 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:17:13 Download gff for
BO15731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20474527..20474643 | 17..133 | 100 | -> | Plus |
| 3L | 20475565..20476509 | 134..1080 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:58:52 Download gff for
BO15731.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20467627..20467743 | 17..133 | 100 | -> | Plus |
| arm_3L | 20468665..20469609 | 134..1080 | 99 | | Plus |
BO15731.pep Sequence
Translation from 16 to 1096
> BO15731.pep
MRLLLRNYSLMEAVKRLLPRPRKKIYNLGACFELVDIPKISYNPSELSEP
RFLEYSNLSDKLHLREAIDKILIPRVVGTTNHSIVREYIVQSLRDLDWDV
EVNSFHDHAPIKGKLHFHNIIATLNPNAERYLVLSCHYDSKYMPGVEFLG
ATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPKD
SIYGARHLAKKWHHEGKLDRIDMLVLLDLLGAPDPAFYSFFENTESWYMR
IQSVETRLAKLQLLERYASSGVAQRDPTRYFQSQAMRSSFIEDDHIPFLR
RNVPILHLIPVPFPSVWHTPDDNASVIDYATTDNLALIIRLFALEYLLAG
TEAKASFLDH
BO15731.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:00:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| isoQC-PB | 354 | CG5976-PB | 1..354 | 1..354 | 1846 | 100 | Plus |
| isoQC-PA | 352 | CG5976-PA | 32..352 | 34..354 | 1651 | 98.8 | Plus |
| CG6168-PC | 342 | CG6168-PC | 39..331 | 40..347 | 686 | 43.5 | Plus |
| CG6168-PB | 342 | CG6168-PB | 39..331 | 40..347 | 686 | 43.5 | Plus |
| QC-PA | 340 | CG32412-PA | 37..326 | 60..347 | 646 | 43.5 | Plus |
