BO15737.complete Sequence
2230 bp assembled on 2006-10-11
GenBank Submission: FJ633566
> BO15737.complete
GAAGTTATCAGTCGACATGTTTACAAAATGCATTAGTTGCTGTGGCCTCG
CAATAATCTCGGTTTTTTTCGCCTGCCTTTTCGTCGAGAATTGCGCGGCC
CTGCAAAAGACGCTGCGCCACTACGAAATTTTTCACAAGGACGATGTGGT
GCACAGGGTGGTGAAAAGGGGTGCCAAGCACAGCACGAATCCCTTCAACA
CCATCAAGGAAGTGGAGTTCACCACGCTGGGCAAGAACTTCCGGCTGATC
CTGCATCCGCACAGGGATGTCCTGCACAGCAAATTCAGGGCCTACGCCGT
GGATGCGGATGGCAACGAAACGGTGGTGCATATGGATCACGATAGCTTCT
ATTCGGGTCGGGTGTTTGGCGAACTGGAGTCCTCTGTGCGTGCCCACATC
GAAGACGGTACCATGACCATGTCCATTCATTTGCCGGAGGAAACCTATCA
CATTGAGCCCTCCTGGCGACACCTGCCGGAGGCCAAGAAGGACACCATGG
TGGCTTACAAGGCCTCGGATGTGAAAGTGCACAAGAATGAGGCGGGTGCC
ACCCCCAAAACCTGTGGCTACATCAAGGAGGGTCTCGAGCTGGAGGACAA
GGAGCACGGTGATACTCTGGACAATGAGCTGCACACGAGGGAGAAGCGTC
AGTCCGATCAGTACGAGTACACGCCCACCAAAACCCGGTGTCCCTTGCTC
TTGGTGGCAGACTATCGATTCTTTCAGGAAATGGGTGGTGGCAACACCAA
GACCACCATTAACTACTTGATAAGCCTCATCGATCGGGTGCACAAGATCT
ACAACGACACTGTGTGGCAGGACCGCTCGGATCAGGAGGGATTCAAGGGC
ATGGGCTTTGTGATCAAGAAGATCGTGGTGCACTCGGAGCCCACGAGACT
GCGAGGAGGCGAGGCACACTACAATATGATCCGTGAGAAGTGGGATGTGC
GCAATCTCCTGGAGGTCTTCTCCCGGGAGTACAGCCACAAAGACTTTTGC
CTTGCCCATCTCTTTACCGATCTCAAGTTCGAAGGCGGCATTTTGGGCCT
GGCCTACGTGGGCTCCCCCCGTCGCAACTCCGTTGGCGGCATTTGCACTC
CAGAATACTTCAAAAATGGTTACACTCTGTACTTGAACTCGGGTCTGAGC
AGCTCCCGCAACCACTATGGTCAGCGGGTCATCACCAGGGAGGCTGACCT
GGTCACGGCCCATGAGTTTGGACACAACTGGGGCTCGGAACACGACCCCG
ACATTCCGGAGTGCTCACCTAGCGCCTCGCAAGGAGGCAGTTTCCTCATG
TACACGTACTCCGTCAGTGGCTACGATGTGAACAATAAGAAATTCTCCCC
CTGCTCCCTGCGTTCGATCCGTAAGGTGCTGCAAGCCAAATCGGGCAGAT
GCTTTTCAGAGCCCGAAGAGTCCTTCTGCGGCAACCTGCGAGTCGAGGGC
GACGAGCAGTGTGATGCTGGTCTTTTGGGCACCGAGGACAACGACTCATG
CTGCGACAAGAACTGCAAGCTGCGCCGGAACCAAGGAGCCATGTGCAGCG
ACAAGAATTCACCGTGCTGCCAGAACTGTCAGTTCATGGCCTCCGGAATG
AAGTGCCGCGAGGCGCAGTACGCCACCTGCGAGCAGGAGGCTCGCTGTAC
CGGCGCCCACGCCGAGTGCCCCAAATCGCCGGCCATGGCGGACGGAACCA
CCTGCCAGGAGCGGGGTCAGTGCCGGAATGGCAAATGCGTGCCGTACTGC
GAGACCCAGGGTCTCCAAAGCTGCATGTGTGATATCATCGCGGATGCCTG
CAAGCGGTGCTGTCGCATGAGCATCAATGAGACTTGCTTCCCCGTAGAGC
CACCTGATGTCCTACCCGATGGCACACCCTGCATCACAGGATTCTGCAAC
AAGGGCGTATGCGAAAAGACCATACAGGATGTGGTGGAGCGCTTCTGGGA
CATCATCGAGGAGATAAATGTGGCCAAGACCTTGAGGTTTCTCAAGGACA
ACATTGTCATGGCCGTTGTCCTCGTCACTGCAGTCTTTTGGATTCCCATC
AGTTGCGTCATATCTTACTTCGACCGCAAGAAGCTGCGCCATGAAATGAA
GCTGATTGAGTGGAGCCAGAAACTGGACCTTATACATCCCAGTGACGAGA
GGCGTCGAGTGATTCACATACGAGTGCCACGCCAGAAGATTTCGGTGGCC
CGAGCCTGTAATGCAAGCTTTCTAGACCAT
BO15737.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:28:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tace-RA | 2199 | CG7908-PA | 1..2196 | 17..2212 | 10980 | 100 | Plus |
| Tace-RB | 789 | CG7908-PB | 1..753 | 17..769 | 3765 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:28:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tace-RA | 2408 | CG7908-RA | 54..2249 | 17..2212 | 10980 | 100 | Plus |
| Tace-RB | 2322 | CG7908-RB | 1053..2163 | 1102..2212 | 5555 | 100 | Plus |
| Tace-RB | 2322 | CG7908-RB | 54..806 | 17..769 | 3765 | 100 | Plus |
| Tace-RB | 2322 | CG7908-RB | 859..1054 | 769..964 | 980 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:28:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30002445..30003011 | 1338..1904 | 2835 | 100 | Plus |
| 3R | 32079331 | 3R | 30001024..30001458 | 335..769 | 2175 | 100 | Plus |
| 3R | 32079331 | 3R | 30000726..30000966 | 95..335 | 1205 | 100 | Plus |
| 3R | 32079331 | 3R | 30002149..30002386 | 1102..1339 | 1190 | 100 | Plus |
| 3R | 32079331 | 3R | 30001511..30001708 | 769..966 | 990 | 100 | Plus |
| 3R | 32079331 | 3R | 30003252..30003414 | 2010..2172 | 815 | 100 | Plus |
| 3R | 32079331 | 3R | 30001823..30001963 | 963..1103 | 705 | 100 | Plus |
| 3R | 32079331 | 3R | 30003071..30003178 | 1902..2009 | 540 | 100 | Plus |
| 3R | 32079331 | 3R | 30000583..30000661 | 17..95 | 395 | 100 | Plus |
| 3R | 32079331 | 3R | 30003479..30003519 | 2172..2212 | 205 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:28:39 has no hits.
BO15737.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:58:24 Download gff for
BO15737.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tace-RA | 1..2199 | 17..2213 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:30:33 Download gff for
BO15737.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tace-RA | 30..2229 | 17..2218 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:29:59 Download gff for
BO15737.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tace-RA | 60..2249 | 23..2214 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:58:24 Download gff for
BO15737.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tace-RA | 30..2229 | 17..2218 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:19:17 Download gff for
BO15737.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tace-RA | 60..2249 | 23..2214 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:19:17 Download gff for
BO15737.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30003480..30003519 | 2173..2214 | 95 | | Plus |
| 3R | 30003252..30003414 | 2010..2172 | 100 | -> | Plus |
| 3R | 30000589..30000661 | 23..95 | 100 | -> | Plus |
| 3R | 30000727..30000966 | 96..335 | 100 | -> | Plus |
| 3R | 30001025..30001458 | 336..769 | 100 | -> | Plus |
| 3R | 30001512..30001706 | 770..964 | 100 | -> | Plus |
| 3R | 30001825..30001963 | 965..1103 | 100 | -> | Plus |
| 3R | 30002151..30002386 | 1104..1339 | 100 | -> | Plus |
| 3R | 30002447..30003010 | 1340..1903 | 100 | -> | Plus |
| 3R | 30003073..30003178 | 1904..2009 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:29:59 Download gff for
BO15737.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25826311..25826383 | 23..95 | 100 | -> | Plus |
| arm_3R | 25826449..25826688 | 96..335 | 100 | -> | Plus |
| arm_3R | 25826747..25827180 | 336..769 | 100 | -> | Plus |
| arm_3R | 25827234..25827428 | 770..964 | 100 | -> | Plus |
| arm_3R | 25827547..25827685 | 965..1103 | 100 | -> | Plus |
| arm_3R | 25827873..25828108 | 1104..1339 | 100 | -> | Plus |
| arm_3R | 25828169..25828732 | 1340..1903 | 100 | -> | Plus |
| arm_3R | 25828795..25828900 | 1904..2009 | 100 | -> | Plus |
| arm_3R | 25828974..25829136 | 2010..2172 | 100 | -> | Plus |
| arm_3R | 25829202..25829241 | 2173..2214 | 95 | | Plus |
BO15737.pep Sequence
Translation from 16 to 2230
> BO15737.pep
MFTKCISCCGLAIISVFFACLFVENCAALQKTLRHYEIFHKDDVVHRVVK
RGAKHSTNPFNTIKEVEFTTLGKNFRLILHPHRDVLHSKFRAYAVDADGN
ETVVHMDHDSFYSGRVFGELESSVRAHIEDGTMTMSIHLPEETYHIEPSW
RHLPEAKKDTMVAYKASDVKVHKNEAGATPKTCGYIKEGLELEDKEHGDT
LDNELHTREKRQSDQYEYTPTKTRCPLLLVADYRFFQEMGGGNTKTTINY
LISLIDRVHKIYNDTVWQDRSDQEGFKGMGFVIKKIVVHSEPTRLRGGEA
HYNMIREKWDVRNLLEVFSREYSHKDFCLAHLFTDLKFEGGILGLAYVGS
PRRNSVGGICTPEYFKNGYTLYLNSGLSSSRNHYGQRVITREADLVTAHE
FGHNWGSEHDPDIPECSPSASQGGSFLMYTYSVSGYDVNNKKFSPCSLRS
IRKVLQAKSGRCFSEPEESFCGNLRVEGDEQCDAGLLGTEDNDSCCDKNC
KLRRNQGAMCSDKNSPCCQNCQFMASGMKCREAQYATCEQEARCTGAHAE
CPKSPAMADGTTCQERGQCRNGKCVPYCETQGLQSCMCDIIADACKRCCR
MSINETCFPVEPPDVLPDGTPCITGFCNKGVCEKTIQDVVERFWDIIEEI
NVAKTLRFLKDNIVMAVVLVTAVFWIPISCVISYFDRKKLRHEMKLIEWS
QKLDLIHPSDERRRVIHIRVPRQKISVARACNASFLDH
BO15737.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:20:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tace-PA | 732 | CG7908-PA | 1..732 | 1..732 | 3985 | 100 | Plus |
| Tace-PB | 262 | CG7908-PB | 1..261 | 1..261 | 1360 | 96.9 | Plus |
| Kul-PC | 985 | CG1964-PC | 478..894 | 222..628 | 528 | 34.4 | Plus |
| Kul-PB | 1537 | CG1964-PB | 478..894 | 222..628 | 528 | 34.4 | Plus |
| Kul-PA | 1537 | CG1964-PA | 478..894 | 222..628 | 528 | 34.4 | Plus |
