BO15748.complete Sequence
1354 bp (1354 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633572
> BO15748.complete
GAAGTTATCAGTCGACATGGTCGACAACAATAACCTACGCAGTGCGGTGA
TCAGCGATGCCCCGCTACTGCCGCCCTCGAGCAGCATCGGAGTGGGCGTT
TCAAGCGGCGGAGGATATCCGCCGGAAGCGGTGCTGCGTACTCCGTATGG
CAATGTTAGGGCTCTGCCCGGACCGGCGCAGCCCCCTCCTCTGCCGCAAT
CCCCATTCCAGCAGACACAACAGTACGGTGGTTTCGGCAGCGGGTACGGC
GGAAACAACTACGGACTCGGGGGTTATGGTGGTTTCAACAGTGGCGCCTT
TGGATATGGTGGACTGGGTGGATTTGGAAGTGGACTTGGAAGTGGATTTG
GAAGTGGATACGGGTATGGAGGTGGCTATGGCGGAGGCTATGGTGGAGGC
TTCGGCGGTGGGTACAACAGATTTGGAGCAATGGGTGAAAACGATGCGGA
GCAGCGGTTCATTTATATGGCAGAGTCCAGCTCGCGCCCGGCCTTTCAGA
GCATCGAATCTCTGGTGTCGGCCATCGGCAACATCGCCTCTATGCTGGAC
TCCACATTCTTCGCGCTGACCAGCTCGTTTCGGGCCATTCTCGGCGTGGC
CACGAACTTTGTACGGCTGCGAAGTGTGTTTGCCCAGTTTTGGACCACGT
TTGCCATATTCCGCGGTCTAAACTGGATGTACAGAAAGATTCTCTATTGG
CTGCGCCTATCGAACCTGGACCCTTCATCGGCAGCCTTTAAGAAGGCCTT
TGCCGAGGCACTGAACGAAAACAACGGCCAGGCGAGAGGAGCACCTAATG
TGCCGCGAAAGGGCAACTCACCCTGGCCGGTGCTGGCCTTTATCAGCTTC
ATCTTTACTGCTCCCTACTTGATCATGAAGCTGCTGGGAACCGTGACGAA
CACCGCCCAGGAGGAAGCCCGTAATCCGGCCAAGTGGACTGCGCCGATTC
AGACTCAGGCCGTTTACGAATTCGTGGCTCGCAGCCCGAGCGAGCTTTCG
CTGCGCGCCGGCCAAATGCTACATGTGGCTCCCCGCGACATCCAGCAGAC
GCTCAATCTGCTGAACACCGGCTGGGCTCTAGCCACCACCAACGGACAGA
CCTCCGGCATCATTCCAATTAGTTATGTGAAATCGCCACAACAAATGCGC
CAAGAGATGCAGGATCAAACCAAGCCCGCTCAGCCACAACCCGAACTAAT
GAATTTGTCCGCGGGAGCCTTTGCGTCTCCTCCGTTGGAGCAGCAAATGA
ACTACGACTTTAACCTGGCTGCCCAGCAGCAGGCGCCTTTGGGACCGCCC
TCAACGACGTCAGCTGTGCTGGGCGAGGGATTCGCCGCAAGCTTTCTAGA
CCAT
BO15748.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:21:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pex13-RA | 1323 | CG4663-PA | 1..1320 | 17..1336 | 6600 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:21:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pex13-RA | 1768 | CG4663-RA | 276..1596 | 16..1336 | 6605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:21:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13229287..13229959 | 688..16 | 3365 | 100 | Minus |
| 2R | 25286936 | 2R | 13228448..13228868 | 1336..916 | 2105 | 100 | Minus |
| 2R | 25286936 | 2R | 13229003..13229232 | 917..688 | 1150 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:21:31 has no hits.
BO15748.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:21 Download gff for
BO15748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4663-RA | 1..1323 | 17..1339 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:08:04 Download gff for
BO15748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4663-RA | 265..1595 | 11..1342 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:23:01 Download gff for
BO15748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex13-RA | 277..1596 | 17..1338 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:21 Download gff for
BO15748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4663-RA | 265..1595 | 11..1342 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:30:29 Download gff for
BO15748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex13-RA | 277..1596 | 17..1338 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:30:29 Download gff for
BO15748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13228445..13228866 | 918..1338 | 99 | <- | Minus |
| 2R | 13229003..13229232 | 688..917 | 100 | <- | Minus |
| 2R | 13229288..13229958 | 17..687 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:23:01 Download gff for
BO15748.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9115950..9116371 | 918..1338 | 99 | <- | Minus |
| arm_2R | 9116508..9116737 | 688..917 | 100 | <- | Minus |
| arm_2R | 9116793..9117463 | 17..687 | 100 | | Minus |
BO15748.pep Sequence
Translation from 16 to 1354
> BO15748.pep
MVDNNNLRSAVISDAPLLPPSSSIGVGVSSGGGYPPEAVLRTPYGNVRAL
PGPAQPPPLPQSPFQQTQQYGGFGSGYGGNNYGLGGYGGFNSGAFGYGGL
GGFGSGLGSGFGSGYGYGGGYGGGYGGGFGGGYNRFGAMGENDAEQRFIY
MAESSSRPAFQSIESLVSAIGNIASMLDSTFFALTSSFRAILGVATNFVR
LRSVFAQFWTTFAIFRGLNWMYRKILYWLRLSNLDPSSAAFKKAFAEALN
ENNGQARGAPNVPRKGNSPWPVLAFISFIFTAPYLIMKLLGTVTNTAQEE
ARNPAKWTAPIQTQAVYEFVARSPSELSLRAGQMLHVAPRDIQQTLNLLN
TGWALATTNGQTSGIIPISYVKSPQQMRQEMQDQTKPAQPQPELMNLSAG
AFASPPLEQQMNYDFNLAAQQQAPLGPPSTTSAVLGEGFAASFLDH
BO15748.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:01:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pex13-PA | 440 | CG4663-PA | 1..440 | 1..440 | 2310 | 100 | Plus |
| CG14191-PA | 193 | CG14191-PA | 40..109 | 71..133 | 189 | 55.6 | Plus |
| CG9269-PA | 146 | CG9269-PA | 49..134 | 70..140 | 186 | 50 | Plus |
| CG14191-PA | 193 | CG14191-PA | 51..132 | 72..140 | 185 | 49.4 | Plus |
| CG15597-PB | 149 | CG15597-PB | 28..98 | 74..133 | 184 | 54.2 | Plus |
| TwdlT-PA | 286 | CG5812-PA | 62..137 | 71..151 | 183 | 53.7 | Plus |
| CG14191-PA | 193 | CG14191-PA | 91..174 | 71..138 | 177 | 43.3 | Plus |
| CG15597-PB | 149 | CG15597-PB | 38..132 | 71..140 | 177 | 46.4 | Plus |
| CG14191-PA | 193 | CG14191-PA | 103..181 | 71..140 | 168 | 51.9 | Plus |
| CG15597-PB | 149 | CG15597-PB | 42..139 | 71..133 | 153 | 36.7 | Plus |
