Clone Sequence Records
BO15767.5prime Sequence
407 bp (407 high quality bases) assembled on 2006-05-30
> BO15767.5prime
GAAGTTATCAGTCGACATGTCCGAAAAGAAGCGATTTGTGTGCGTTAATT
GTGGACACAGAGTAAAAGAACTGTTCAAGAAATACAGCAATACTATGAAA
ACCACGCAATGCGACAACTGTCACCAAATCACGGATAAATACATTGAGTT
CGAGGAGTTTATCATATTAATAGATGCACTGCTATTAGATTCGTGCGCCT
TCCGGCACATTATATACAATGGCGACTTTAAGGTGACGAGCTCTACTGGA
AGGTTTCGCTGGTGGTGCTGCTCCTGGAATCCTTTGCGCTGTGCCGCCAA
AAACTGCCCGACCCTCCGAATGCCTCTTTGCATGTCCACGAAAAGGGCTT
TTACACATATACCCTTCAAAACATGGGAGATTACATGTTCAGCAAGCTTT
CTAGACC
BO15767.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:40:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32442-PB | 378 | CG32442-RB | 1..375 | 17..391 | 1875 | 100 | Plus |
CG32442-PA | 717 | CG32442-RA | 1..216 | 17..232 | 1080 | 100 | Plus |
CG32442-PA | 717 | CG32442-RA | 215..367 | 239..391 | 765 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 10:28:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32442-RB | 942 | CG32442-RB | 93..467 | 17..391 | 1875 | 100 | Plus |
CG32442-RA | 934 | CG32442-RA | 93..459 | 17..391 | 1745 | 97.9 | Plus |
CG32442-RC | 930 | CG32442-RC | 93..455 | 17..391 | 1685 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 10:28:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21528770..21528910 | 379..239 | 705 | 100 | Minus |
3L | 28110227 | 3L | 21528958..21529085 | 240..113 | 640 | 100 | Minus |
3L | 28110227 | 3L | 21529145..21529241 | 113..17 | 485 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-04 10:28:14 has no hits.
BO15767.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:53:54 Download gff for
BO15767.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32442-PB | 1..378 | 17..394 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:58:53 Download gff for
BO15767.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32442-PB | 1..378 | 17..394 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 11:25:51 Download gff for
BO15767.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32442-RB | 93..472 | 17..398 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 12:37:06 Download gff for
BO15767.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32442-RB | 93..472 | 17..398 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 12:37:06 Download gff for
BO15767.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21528770..21528908 | 241..379 | 100 | <- | Minus |
3L | 21528958..21529085 | 113..240 | 100 | <- | Minus |
3L | 21529146..21529241 | 17..112 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 11:25:51 Download gff for
BO15767.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21521870..21522008 | 241..379 | 100 | <- | Minus |
arm_3L | 21522058..21522185 | 113..240 | 100 | <- | Minus |
arm_3L | 21522246..21522341 | 17..112 | 100 | | Minus |
BO15767.3prime Sequence
407 bp (407 high quality bases) assembled on 2006-05-30
> BO15767.3prime
ATGGTCTAGAAAGCTTGCTGAACATGTAATCTCCCATGTTTTGAAGGGTA
TATGTGTAAAAGCCCTTTTCGTGGACATGCAAAGAGGCATTCGGAGGGTC
GGGCAGTTTTTGGCGGCACAGCGCAAAGGATTCCAGGAGCAGCACCACCA
GCGAAACCTTCCAGTAGAGCTCGTCACCTTAAAGTCGCCATTGTATATAA
TGTGCCGGAAGGCGCACGAATCTAATAGCAGTGCATCTATTAATATGATA
AACTCCTCGAACTCAATGTATTTATCCGTGATTTGGTGACAGTTGTCGCA
TTGCGTGGTTTTCATAGTATTGCTGTATTTCTTGAACAGTTCTTTTACTC
TGTGTCCACAATTAACGCACACAAATCGCTTCTTTTCGGACATGTCGACT
GATAACT
BO15767.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:40:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32442-PB | 378 | CG32442-RB | 1..375 | 393..19 | 1875 | 100 | Minus |
CG32442-PA | 717 | CG32442-RA | 1..216 | 393..178 | 1080 | 100 | Minus |
CG32442-PA | 717 | CG32442-RA | 215..367 | 171..19 | 765 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:18:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32442-RB | 942 | CG32442-RB | 93..467 | 393..19 | 1875 | 100 | Minus |
CG32442-RA | 934 | CG32442-RA | 93..459 | 393..19 | 1745 | 97.9 | Minus |
CG32442-RC | 930 | CG32442-RC | 93..455 | 393..19 | 1685 | 96.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:18:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21528770..21528910 | 31..171 | 705 | 100 | Plus |
3L | 28110227 | 3L | 21528958..21529085 | 170..297 | 640 | 100 | Plus |
3L | 28110227 | 3L | 21529145..21529241 | 297..393 | 485 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 04:18:28 has no hits.
BO15767.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:53:53 Download gff for
BO15767.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32442-PB | 1..378 | 16..393 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:58:51 Download gff for
BO15767.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32442-PB | 1..378 | 16..393 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:37:50 Download gff for
BO15767.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32442-RB | 93..472 | 12..393 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:06:31 Download gff for
BO15767.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32442-RB | 93..472 | 12..393 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:06:31 Download gff for
BO15767.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21528770..21528908 | 31..169 | 100 | <- | Plus |
3L | 21528958..21529085 | 170..297 | 100 | <- | Plus |
3L | 21529146..21529241 | 298..393 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:37:50 Download gff for
BO15767.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21521870..21522008 | 31..169 | 100 | <- | Plus |
arm_3L | 21522058..21522185 | 170..297 | 100 | <- | Plus |
arm_3L | 21522246..21522341 | 298..393 | 100 | | Plus |
BO15767.complete Sequence
409 bp (409 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633576
> BO15767.complete
GAAGTTATCAGTCGACATGTCCGAAAAGAAGCGATTTGTGTGCGTTAATT
GTGGACACAGAGTAAAAGAACTGTTCAAGAAATACAGCAATACTATGAAA
ACCACGCAATGCGACAACTGTCACCAAATCACGGATAAATACATTGAGTT
CGAGGAGTTTATCATATTAATAGATGCACTGCTATTAGATTCGTGCGCCT
TCCGGCACATTATATACAATGGCGACTTTAAGGTGACGAGCTCTACTGGA
AGGTTTCGCTGGTGGTGCTGCTCCTGGAATCCTTTGCGCTGTGCCGCCAA
AAACTGCCCGACCCTCCGAATGCCTCTTTGCATGTCCACGAAAAGGGCTT
TTACACATATACCCTTCAAAACATGGGAGATTACATGTTCAGCAAGCTTT
CTAGACCAT
BO15767.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:55:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32442-RB | 378 | CG32442-PB | 1..375 | 17..391 | 1875 | 100 | Plus |
CG32442-RA | 717 | CG32442-PA | 1..367 | 17..391 | 1720 | 97.9 | Plus |
CG32442-RC | 366 | CG32442-PC | 1..363 | 17..391 | 1660 | 96.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:55:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32442-RB | 942 | CG32442-RB | 93..467 | 17..391 | 1875 | 100 | Plus |
CG32442-RA | 934 | CG32442-RA | 93..459 | 17..391 | 1720 | 97.9 | Plus |
CG32442-RC | 930 | CG32442-RC | 93..455 | 17..391 | 1660 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:55:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21528770..21528910 | 379..239 | 705 | 100 | Minus |
3L | 28110227 | 3L | 21528958..21529085 | 240..113 | 640 | 100 | Minus |
3L | 28110227 | 3L | 21529145..21529241 | 113..17 | 485 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 12:55:18 has no hits.
BO15767.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:59:48 Download gff for
BO15767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32442-RB | 1..378 | 17..394 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:06:53 Download gff for
BO15767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32442-RB | 66..445 | 17..398 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:25:35 Download gff for
BO15767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32442-RB | 93..467 | 17..393 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:59:48 Download gff for
BO15767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32442-RB | 66..445 | 17..398 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:07:22 Download gff for
BO15767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32442-RB | 93..467 | 17..393 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:07:22 Download gff for
BO15767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21528770..21528908 | 241..379 | 100 | <- | Minus |
3L | 21528958..21529085 | 113..240 | 100 | <- | Minus |
3L | 21529146..21529241 | 17..112 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:25:35 Download gff for
BO15767.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21521870..21522008 | 241..379 | 100 | <- | Minus |
arm_3L | 21522058..21522185 | 113..240 | 100 | <- | Minus |
arm_3L | 21522246..21522341 | 17..112 | 100 | | Minus |
BO15767.pep Sequence
Translation from 16 to 409
> BO15767.pep
MSEKKRFVCVNCGHRVKELFKKYSNTMKTTQCDNCHQITDKYIEFEEFII
LIDALLLDSCAFRHIIYNGDFKVTSSTGRFRWWCCSWNPLRCAAKNCPTL
RMPLCMSTKRAFTHIPFKTWEITCSASFLDH
BO15767.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:48:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32442-PB | 125 | CG32442-PB | 1..125 | 1..125 | 708 | 100 | Plus |
CG32442-PC | 121 | CG32442-PC | 1..121 | 1..125 | 674 | 96.8 | Plus |
CG32442-PA | 238 | CG32442-PA | 1..73 | 1..73 | 393 | 98.6 | Plus |