Clone BO15773 Report

Search the DGRC for BO15773

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:157
Well:73
Vector:pDNR-Dual
Associated Gene/TranscriptDptB-RA
Protein status:BO15773.pep: validated full length
Sequenced Size:394

Clone Sequence Records

BO15773.3prime Sequence

392 bp (392 high quality bases) assembled on 2006-05-30

> BO15773.3prime
ATGGTCTAGAAAGCTTGCAAACCTGAAGGTATACACTCCACCGGCTCCCC
ACTGAGGCCGGCTGTTGCCATAGGGTCCACCAAGGTGCTGGGCATACGAT
CCCGTGGCATCGAAGGAGTGGCGTCCATTGGGGCTCTGCCAAACGGGAGC
ACGTCCGTTGAGGCTCAGATCGAATCCTTGCTTTGGGCTTCCACCGCCAC
CGCCATTCAATTGGAACTGGCGACGCACTCTGTGCAGGGGCACATCAAAA
TTGGGAGCATATGCCAGTGGTTCAGGCTGCAGATTCACAATCTCTCGGGG
ATCAGGATAGGGATAAGCCCAGGCACTCGAGAAGGCACAAGCCAGTCCAA
TGAATAGAAGACTAGCGGTGAAATGCATGTCGACTGATAACT

BO15773.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:40:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG10794-PA 363 DptB-RA 1..360 378..19 1800 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:17:30
Subject Length Description Subject Range Query Range Score Percent Strand
DptB-RA 449 CG10794-RA 32..391 378..19 1800 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 09:17:26
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18867595..18867837 261..19 1215 100 Minus
2R 25286936 2R 18867422..18867538 378..262 585 100 Minus
Blast to na_te.dros performed on 2015-02-13 09:17:28 has no hits.

BO15773.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:54:02 Download gff for BO15773.3prime
Subject Subject Range Query Range Percent Splice Strand
DptB-PA 1..363 18..378 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:59:02 Download gff for BO15773.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10794-PA 1..363 18..378 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 15:51:44 Download gff for BO15773.3prime
Subject Subject Range Query Range Percent Splice Strand
DptB-RA 21..391 19..388 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:08:16 Download gff for BO15773.3prime
Subject Subject Range Query Range Percent Splice Strand
DptB-RA 21..391 19..388 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:08:16 Download gff for BO15773.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 18867595..18867837 19..261 100   Minus
2R 18867411..18867538 262..388 96 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 15:51:44 Download gff for BO15773.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14754916..14755043 262..388 96 -> Minus
arm_2R 14755100..14755342 19..261 100   Minus

BO15773.5prime Sequence

392 bp (392 high quality bases) assembled on 2006-05-30

> BO15773.5prime
GAAGTTATCAGTCGACATGCATTTCACCGCTAGTCTTCTATTCATTGGAC
TGGCTTGTGCCTTCTCGAGTGCCTGGGCTTATCCCTATCCTGATCCCCGA
GAGATTGTGAATCTGCAGCCTGAACCACTGGCATATGCTCCCAATTTTGA
TGTGCCCCTGCACAGAGTGCGTCGCCAGTTCCAATTGAATGGCGGTGGCG
GTGGAAGCCCAAAGCAAGGATTCGATCTGAGCCTCAACGGACGTGCTCCC
GTTTGGCAGAGCCCCAATGGACGCCACTCCTTCGATGCCACGGGATCGTA
TGCCCAGCACCTTGGTGGACCCTATGGCAACAGCCGGCCTCAGTGGGGAG
CCGGTGGAGTGTATACCTTCAGGTTTGCAAGCTTTCTAGACC

BO15773.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:40:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG10794-PA 363 DptB-RA 1..360 17..376 1800 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:07:48
Subject Length Description Subject Range Query Range Score Percent Strand
DptB-RA 449 CG10794-RA 32..391 17..376 1800 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:07:39
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18867595..18867837 134..376 1215 100 Plus
2R 25286936 2R 18867422..18867538 17..133 585 100 Plus
Blast to na_te.dros performed on 2015-02-13 01:07:43 has no hits.

BO15773.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:54:03 Download gff for BO15773.5prime
Subject Subject Range Query Range Percent Splice Strand
DptB-PA 1..363 17..377 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:59:03 Download gff for BO15773.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10794-PA 1..363 17..377 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 08:44:12 Download gff for BO15773.5prime
Subject Subject Range Query Range Percent Splice Strand
DptB-RA 21..391 7..376 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:06:59 Download gff for BO15773.5prime
Subject Subject Range Query Range Percent Splice Strand
DptB-RA 21..391 7..376 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:06:59 Download gff for BO15773.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 18867411..18867538 7..133 96 -> Plus
2R 18867595..18867837 134..376 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 08:44:12 Download gff for BO15773.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14754916..14755043 7..133 96 -> Plus
arm_2R 14755100..14755342 134..376 100   Plus

BO15773.complete Sequence

394 bp (394 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633579

> BO15773.complete
GAAGTTATCAGTCGACATGCATTTCACCGCTAGTCTTCTATTCATTGGAC
TGGCTTGTGCCTTCTCGAGTGCCTGGGCTTATCCCTATCCTGATCCCCGA
GAGATTGTGAATCTGCAGCCTGAACCACTGGCATATGCTCCCAATTTTGA
TGTGCCCCTGCACAGAGTGCGTCGCCAGTTCCAATTGAATGGCGGTGGCG
GTGGAAGCCCAAAGCAAGGATTCGATCTGAGCCTCAACGGACGTGCTCCC
GTTTGGCAGAGCCCCAATGGACGCCACTCCTTCGATGCCACGGGATCGTA
TGCCCAGCACCTTGGTGGACCCTATGGCAACAGCCGGCCTCAGTGGGGAG
CCGGTGGAGTGTATACCTTCAGGTTTGCAAGCTTTCTAGACCAT

BO15773.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:30:06
Subject Length Description Subject Range Query Range Score Percent Strand
DptB-RA 363 CG10794-PA 1..360 17..376 1800 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:30:08
Subject Length Description Subject Range Query Range Score Percent Strand
DptB-RA 449 CG10794-RA 32..391 17..376 1800 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:30:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18867595..18867837 134..376 1215 100 Plus
2R 25286936 2R 18867422..18867538 17..133 585 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:30:05 has no hits.

BO15773.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:54:29 Download gff for BO15773.complete
Subject Subject Range Query Range Percent Splice Strand
DptB-RA 1..363 17..377 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:26:43 Download gff for BO15773.complete
Subject Subject Range Query Range Percent Splice Strand
DptB-RA 22..392 7..376 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:10:41 Download gff for BO15773.complete
Subject Subject Range Query Range Percent Splice Strand
DptB-RA 32..391 17..378 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:54:29 Download gff for BO15773.complete
Subject Subject Range Query Range Percent Splice Strand
DptB-RA 22..392 7..376 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:22:35 Download gff for BO15773.complete
Subject Subject Range Query Range Percent Splice Strand
DptB-RA 32..391 17..378 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:22:35 Download gff for BO15773.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18867422..18867538 17..133 100 -> Plus
2R 18867595..18867837 134..378 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:10:41 Download gff for BO15773.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14754927..14755043 17..133 100 -> Plus
arm_2R 14755100..14755342 134..378 99   Plus

BO15773.pep Sequence

Translation from 16 to 394

> BO15773.pep
MHFTASLLFIGLACAFSSAWAYPYPDPREIVNLQPEPLAYAPNFDVPLHR
VRRQFQLNGGGGGSPKQGFDLSLNGRAPVWQSPNGRHSFDATGSYAQHLG
GPYGNSRPQWGAGGVYTFRFASFLDH

BO15773.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:21:53
Subject Length Description Subject Range Query Range Score Percent Strand
DptB-PA 120 CG10794-PA 1..120 1..120 668 100 Plus
Dpt-PA 106 CG12763-PA 1..106 1..123 246 41.5 Plus