Clone Sequence Records
BO15773.3prime Sequence
392 bp (392 high quality bases) assembled on 2006-05-30
> BO15773.3prime
ATGGTCTAGAAAGCTTGCAAACCTGAAGGTATACACTCCACCGGCTCCCC
ACTGAGGCCGGCTGTTGCCATAGGGTCCACCAAGGTGCTGGGCATACGAT
CCCGTGGCATCGAAGGAGTGGCGTCCATTGGGGCTCTGCCAAACGGGAGC
ACGTCCGTTGAGGCTCAGATCGAATCCTTGCTTTGGGCTTCCACCGCCAC
CGCCATTCAATTGGAACTGGCGACGCACTCTGTGCAGGGGCACATCAAAA
TTGGGAGCATATGCCAGTGGTTCAGGCTGCAGATTCACAATCTCTCGGGG
ATCAGGATAGGGATAAGCCCAGGCACTCGAGAAGGCACAAGCCAGTCCAA
TGAATAGAAGACTAGCGGTGAAATGCATGTCGACTGATAACT
BO15773.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:40:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10794-PA | 363 | DptB-RA | 1..360 | 378..19 | 1800 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:17:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DptB-RA | 449 | CG10794-RA | 32..391 | 378..19 | 1800 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 09:17:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18867595..18867837 | 261..19 | 1215 | 100 | Minus |
2R | 25286936 | 2R | 18867422..18867538 | 378..262 | 585 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 09:17:28 has no hits.
BO15773.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:54:02 Download gff for
BO15773.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DptB-PA | 1..363 | 18..378 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:59:02 Download gff for
BO15773.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10794-PA | 1..363 | 18..378 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 15:51:44 Download gff for
BO15773.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DptB-RA | 21..391 | 19..388 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:08:16 Download gff for
BO15773.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DptB-RA | 21..391 | 19..388 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:08:16 Download gff for
BO15773.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18867595..18867837 | 19..261 | 100 | | Minus |
2R | 18867411..18867538 | 262..388 | 96 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 15:51:44 Download gff for
BO15773.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14754916..14755043 | 262..388 | 96 | -> | Minus |
arm_2R | 14755100..14755342 | 19..261 | 100 | | Minus |
BO15773.5prime Sequence
392 bp (392 high quality bases) assembled on 2006-05-30
> BO15773.5prime
GAAGTTATCAGTCGACATGCATTTCACCGCTAGTCTTCTATTCATTGGAC
TGGCTTGTGCCTTCTCGAGTGCCTGGGCTTATCCCTATCCTGATCCCCGA
GAGATTGTGAATCTGCAGCCTGAACCACTGGCATATGCTCCCAATTTTGA
TGTGCCCCTGCACAGAGTGCGTCGCCAGTTCCAATTGAATGGCGGTGGCG
GTGGAAGCCCAAAGCAAGGATTCGATCTGAGCCTCAACGGACGTGCTCCC
GTTTGGCAGAGCCCCAATGGACGCCACTCCTTCGATGCCACGGGATCGTA
TGCCCAGCACCTTGGTGGACCCTATGGCAACAGCCGGCCTCAGTGGGGAG
CCGGTGGAGTGTATACCTTCAGGTTTGCAAGCTTTCTAGACC
BO15773.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:40:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10794-PA | 363 | DptB-RA | 1..360 | 17..376 | 1800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:07:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DptB-RA | 449 | CG10794-RA | 32..391 | 17..376 | 1800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:07:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18867595..18867837 | 134..376 | 1215 | 100 | Plus |
2R | 25286936 | 2R | 18867422..18867538 | 17..133 | 585 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 01:07:43 has no hits.
BO15773.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:54:03 Download gff for
BO15773.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DptB-PA | 1..363 | 17..377 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:59:03 Download gff for
BO15773.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10794-PA | 1..363 | 17..377 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 08:44:12 Download gff for
BO15773.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DptB-RA | 21..391 | 7..376 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:06:59 Download gff for
BO15773.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DptB-RA | 21..391 | 7..376 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:06:59 Download gff for
BO15773.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18867411..18867538 | 7..133 | 96 | -> | Plus |
2R | 18867595..18867837 | 134..376 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 08:44:12 Download gff for
BO15773.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14754916..14755043 | 7..133 | 96 | -> | Plus |
arm_2R | 14755100..14755342 | 134..376 | 100 | | Plus |
BO15773.complete Sequence
394 bp (394 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633579
> BO15773.complete
GAAGTTATCAGTCGACATGCATTTCACCGCTAGTCTTCTATTCATTGGAC
TGGCTTGTGCCTTCTCGAGTGCCTGGGCTTATCCCTATCCTGATCCCCGA
GAGATTGTGAATCTGCAGCCTGAACCACTGGCATATGCTCCCAATTTTGA
TGTGCCCCTGCACAGAGTGCGTCGCCAGTTCCAATTGAATGGCGGTGGCG
GTGGAAGCCCAAAGCAAGGATTCGATCTGAGCCTCAACGGACGTGCTCCC
GTTTGGCAGAGCCCCAATGGACGCCACTCCTTCGATGCCACGGGATCGTA
TGCCCAGCACCTTGGTGGACCCTATGGCAACAGCCGGCCTCAGTGGGGAG
CCGGTGGAGTGTATACCTTCAGGTTTGCAAGCTTTCTAGACCAT
BO15773.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:30:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DptB-RA | 363 | CG10794-PA | 1..360 | 17..376 | 1800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:30:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DptB-RA | 449 | CG10794-RA | 32..391 | 17..376 | 1800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:30:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18867595..18867837 | 134..376 | 1215 | 100 | Plus |
2R | 25286936 | 2R | 18867422..18867538 | 17..133 | 585 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:30:05 has no hits.
BO15773.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:54:29 Download gff for
BO15773.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DptB-RA | 1..363 | 17..377 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:26:43 Download gff for
BO15773.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DptB-RA | 22..392 | 7..376 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:10:41 Download gff for
BO15773.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DptB-RA | 32..391 | 17..378 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:54:29 Download gff for
BO15773.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DptB-RA | 22..392 | 7..376 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:22:35 Download gff for
BO15773.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
DptB-RA | 32..391 | 17..378 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:22:35 Download gff for
BO15773.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18867422..18867538 | 17..133 | 100 | -> | Plus |
2R | 18867595..18867837 | 134..378 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:10:41 Download gff for
BO15773.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14754927..14755043 | 17..133 | 100 | -> | Plus |
arm_2R | 14755100..14755342 | 134..378 | 99 | | Plus |
BO15773.pep Sequence
Translation from 16 to 394
> BO15773.pep
MHFTASLLFIGLACAFSSAWAYPYPDPREIVNLQPEPLAYAPNFDVPLHR
VRRQFQLNGGGGGSPKQGFDLSLNGRAPVWQSPNGRHSFDATGSYAQHLG
GPYGNSRPQWGAGGVYTFRFASFLDH
BO15773.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:21:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
DptB-PA | 120 | CG10794-PA | 1..120 | 1..120 | 668 | 100 | Plus |
Dpt-PA | 106 | CG12763-PA | 1..106 | 1..123 | 246 | 41.5 | Plus |