BO15782.complete Sequence
2167 bp assembled on 2006-10-11
GenBank Submission: FJ633582
> BO15782.complete
GAAGTTATCAGTCGACATGGGCGACAACGTGGTGACGGAACTAAATAACT
TGGATTTGAACAATCAAAAGGCTGCCAAGATGAAGAAGGAGAAAAAGGAG
AAGCCATCCGGCGGTGGAGATACTCGCAAGGAACTCAGTCCCTTGCCCAA
GTACATCGAGGAGCGCAATGTCTTCTGGGAGAAGTGCAAGGCGGAATACG
AGGCCGAACTGGCGGCCAAGAAGCGTGAGCCCATCAAGGTGACACTGCCC
GATGGCAAGCAGGTGGACGCCACCTCCTGGGAGACCACTCCGTACGAAGT
GGCCCGCGGCATTAGTCAGGGTCTCGCTGACAACACCGTCATCTCCAAGG
TGAACGGCGAGGTGTGGGATTTGGACCGTGTGCTCGAGGGAAACTGCACC
CTGCAGCTTCTCAAGTTCGACGACCCTGAGGCGCAGGCCGTCTTCTGGCA
CAGCTCTGCCCACATCATGGGTGAGGCCATGGAGCGCATCTATGGTGGAC
ACCTGTGCTACGGTCCGCCCATTGAAAACGGCTTCTACTACGACATGCAT
CTGGAGGGCGAGGGTATCTCCACCAACGACTACGGCGCCATGGAGGGTCT
GGTTAAGCAAATTGTCAAGGAGAAGCAGAACTTCGAACGTCTGGAGATGA
AGAAGTCCGACCTGCTGGAGATGTTCAAATACAATGAGTTCAAGGTGCGC
ATTCTCAACGAGAAGGTGACCACCGACCGCACCACTGTCTACAAGTGCGG
TTCTTTGATCGATCTCTGCCGCGGACCTCATGTTCGTCACACCGGCAAGG
TGAAGGCCCTGAAGATCACCAAGAACTCCTCTACCTACTGGGAGGGTAAG
GCTGACGCTGAGACACTGCAACGCGTCTACGGCATCTCGTTCCCCGACCC
GAAGCAGCTCAAGGAGTGGGAGAAACTTCAGGAGGAGGCGGCTAAGCGTG
ATCACCGCAAAATCGGTCGCGAGCAGGAGCTGTTCTTCTTCCATGAACTT
TCGCCTGGCTCATGCTTTTTCCAGCCGCGAGGAGCGCACATCTACAACAC
CCTGATGGGCTTCATCAAGGCGGAATATAGAAAGCGTGGTTTCCAAGAAG
TCATTTCCCCCAACATCTACAACGCTAAGTTGTGGATGACCTCCGGCCAC
TGGCAGCACTATGCCGAGAACATGTTCTCCTTCGAGGCCGAGAAGGAGAA
GTTCGCCCTCAAGCCCATGAATTGTCCAGGACATTGTCTCATCTTCGATA
ACCGCAATCGATCCTGGCGAGAGCTGCCACTGCGAATGGCCGACTTCGGT
GTGCTTCATCGCAACGAGCTCTCCGGTGCTTTAACCGGATTAACTCGCGT
GCGTCGCTTCCAGCAGGACGATGCGCACATCTTCTGTGCCCCCGAGCAGA
TTAAAAGCGAAATGAAGGGCTGCCTGGAGTTCCTGAAGTATGTGTATACC
ATTTTCGGATTCTCCTTCCAGCTGGTGCTGTCCACACGCCCGGATAATTA
CCTTGGCGAGTTGGAACAGTGGAATGATGCGGAAAAGGCGCTGGCTGAAT
CACTCAACGAGTTTGGAATGCCGTGGAAGGAGAACCCCGGCGATGGCGCC
TTCTACGGACCGAAGATTGATATTACCATTATGGATGCACTGAAGCGTGC
CCATCAGTGCGCCACCATCCAGTTGGACTTCCAGCTGCCAATTCGTTTTA
ATCTCAGCTACATCGCCGACGATGGCGAGAAGAAGAGGCCGGTGATCATC
CATCGCGCTATTCTTGGCTCAGTGGAGCGGATGATTGCCATTCTCACGGA
GAACTTTGCTGGCAAGTGGCCCTTCTGGCTATCACCGCGCCAGGTGATGG
TCGTTCCAGTGGGTCCTGCCTATGATCAGTACGCCCAGTCAGTGCGGGAT
CAGTTGCACGATGCTGGATTCATGAGCGAGGCGGATTGCGATGCCGGCGA
CACGATGAACAAGAAGATACGCAATGCTCAGTTGGCCCAGTTCAACTTCA
TTCTGGTGGTGGGCGACAAGGAGCGCTCCTCGAATACCGTTAACGTGCGC
ACTCGGGACAACAAGGTGCACGGCGAGGTCTCCGTGGCGGAACTCATCAC
AAAGCTGCAAAAGATTCGCGACGAATTCATCGCCAACGAGGACAGCTTCG
CAAGCTTTCTAGACCAT
BO15782.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:24:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-thr-RD | 2244 | CG5353-PD | 162..2241 | 70..2149 | 10400 | 100 | Plus |
| Aats-thr-RA | 2244 | CG5353-PA | 162..2241 | 70..2149 | 10400 | 100 | Plus |
| Aats-thr-RC | 2073 | CG5353-PC | 1..2070 | 80..2149 | 10350 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:24:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-thr-RB | 2298 | CG5353-RB | 31..2163 | 17..2149 | 10665 | 100 | Plus |
| Aats-thr-RD | 2796 | CG5353-RD | 306..2385 | 70..2149 | 10400 | 100 | Plus |
| Aats-thr-RA | 2520 | CG5353-RA | 306..2385 | 70..2149 | 10400 | 100 | Plus |
| Aats-thr-RD | 2796 | CG5353-RD | 31..86 | 17..72 | 280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:24:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12105176..12106759 | 566..2149 | 7920 | 100 | Plus |
| 2L | 23513712 | 2L | 12104687..12105121 | 131..565 | 2175 | 100 | Plus |
| 2L | 23513712 | 2L | 12104490..12104552 | 69..131 | 315 | 100 | Plus |
| 2L | 23513712 | 2L | 12103781..12103836 | 17..72 | 280 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:24:08 has no hits.
BO15782.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:31:46 Download gff for
BO15782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-thr-RA | 162..2244 | 70..2153 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:49:36 Download gff for
BO15782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-thr-RB | 48..2190 | 17..2161 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:07:18 Download gff for
BO15782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-thr-RB | 31..2163 | 17..2151 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:31:46 Download gff for
BO15782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-thr-RB | 48..2194 | 17..2161 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:20:42 Download gff for
BO15782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-thr-RB | 31..2163 | 17..2151 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:20:42 Download gff for
BO15782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12103781..12103834 | 17..70 | 100 | -> | Plus |
| 2L | 12104492..12104552 | 71..131 | 100 | -> | Plus |
| 2L | 12104688..12105121 | 132..565 | 100 | -> | Plus |
| 2L | 12105176..12106759 | 566..2151 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:07:18 Download gff for
BO15782.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12103781..12103834 | 17..70 | 100 | -> | Plus |
| arm_2L | 12104492..12104552 | 71..131 | 100 | -> | Plus |
| arm_2L | 12104688..12105121 | 132..565 | 100 | -> | Plus |
| arm_2L | 12105176..12106759 | 566..2151 | 99 | | Plus |
BO15782.pep Sequence
Translation from 16 to 2167
> BO15782.pep
MGDNVVTELNNLDLNNQKAAKMKKEKKEKPSGGGDTRKELSPLPKYIEER
NVFWEKCKAEYEAELAAKKREPIKVTLPDGKQVDATSWETTPYEVARGIS
QGLADNTVISKVNGEVWDLDRVLEGNCTLQLLKFDDPEAQAVFWHSSAHI
MGEAMERIYGGHLCYGPPIENGFYYDMHLEGEGISTNDYGAMEGLVKQIV
KEKQNFERLEMKKSDLLEMFKYNEFKVRILNEKVTTDRTTVYKCGSLIDL
CRGPHVRHTGKVKALKITKNSSTYWEGKADAETLQRVYGISFPDPKQLKE
WEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFFQPRGAHIYNTLMGFI
KAEYRKRGFQEVISPNIYNAKLWMTSGHWQHYAENMFSFEAEKEKFALKP
MNCPGHCLIFDNRNRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQ
DDAHIFCAPEQIKSEMKGCLEFLKYVYTIFGFSFQLVLSTRPDNYLGELE
QWNDAEKALAESLNEFGMPWKENPGDGAFYGPKIDITIMDALKRAHQCAT
IQLDFQLPIRFNLSYIADDGEKKRPVIIHRAILGSVERMIAILTENFAGK
WPFWLSPRQVMVVPVGPAYDQYAQSVRDQLHDAGFMSEADCDAGDTMNKK
IRNAQLAQFNFILVVGDKERSSNTVNVRTRDNKVHGEVSVAELITKLQKI
RDEFIANEDSFASFLDH
BO15782.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:36:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-thr-PD | 747 | CG5353-PD | 55..747 | 19..711 | 3691 | 100 | Plus |
| Aats-thr-PA | 747 | CG5353-PA | 55..747 | 19..711 | 3691 | 100 | Plus |
| Aats-thr-PC | 690 | CG5353-PC | 1..690 | 22..711 | 3678 | 100 | Plus |
| Aats-thr-PB | 690 | CG5353-PB | 1..690 | 22..711 | 3678 | 100 | Plus |
