BO15784.complete Sequence
1459 bp (1459 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633583
> BO15784.complete
GAAGTTATCAGTCGACATGGTTACCACTGTGAAGAATCGTCGCTTTGAGG
ATGAAGACTCCGGCTTGGGTGTCCGTCACTTCCAGGTCTTACTGCTATTC
TTTGCCCTTACGGTGGCCTATGGCTGCCGAGTCAACCTCTCCGTGGCTGT
GGTGGCCATGACCGATGCCGCCTCCGTCAATCCCGATTTTCCCGAGTATA
ATTGGTCGGAGAAGACGAAATCCCTGCTGCTGAGCAGCTTCTTCTGGGGC
TATGTGATCACCCAGGTGCCAGCTGGTCAATTGGCTCGCAAATATGGCGG
CAAAGTGATGATCCTGTCGGGACTGGCCATCTGCTCGATCCTGAACATCC
TGACACCCATTTGCGCAAAGATCGGAGGCTGGCAGCTGGTCTGCGCCCTA
CGAGTGGTGGAAGGTCTGTGCCAGGGCGTGGTCTTTCCCTCAACCCACAC
GATCCTCTCCCAATGGGCACCGCCCAAGGAGCGTGCCACGTTGGGAACCT
GTGCCTACTCGGGTAACCAGTTCGGAACGATTCTCATGCTGGCCACCAGT
GGAGTGATTGCAGCCTCGCCAATCGGCTGGCCCAGCATCTTCTATATCTC
TGGAGGAATCGGATGCGTGTGGTCGGTGGTGTACTTCTTCTTCGGCGCAG
GATCGCCACAAGAGTGCAAGTCCATTTCGGCGGAGGAGAAGAAGCTGATC
GAGATGTCGCAGGCCGACGAGGTGAGCGGTGGCCAGGAACAGCCGAAGGA
GCAGTTGCCCACGCCCTGGCTGAGCTTCTTCACTTCACCCGCTTTCCTCG
TCCTGATCGTCTCACACTCGGTGCACAACTGGGGTTTCTGGACCCTGCTC
ACCGAGATCCCCAGCTACATGAAGAACATCCTGGGCAAGGACATCAAGTC
GAATGCTCTTCTCTCCTCGCTGCCCTACGTCTGCATGTTCGCCATGTCCT
TTGTATTCTCGTCGATATCCGCACAGTTGAACAACCGCAACTGCATTTCA
AGGTCTACGAGCAGGAAGCTCTTCAACTCCATTGGTCTGTGGATTCCTAT
GGTCACCTTGGTTGGCCTTGGCTATGTGAACCCAGATCAGTCGGAACTGG
CTGTGGTCCTACTCTGTTTCACCGTGGGCATGAATGGAGCGACCTACCTG
GGCTTCAACACGAACCACATCGATCTGTCGCCCAACTTCGCTGGCATCCT
CATGGGCATCACCAACGGCGTGGCCAACATTATGAGCATCATTGCTCCGC
TGATCGTCGGATTCATTGTCACAAATGAGCACGATCCCGAGCAGTGGCGC
ATTGTGTTCTTCATTGCAGCCGGATTCTACCTGGTGGGCAATACTCTGTA
CGTGATCTTCGGCAAGGCGAATGTCCAGCCCTGGAACGATCCTCCGGCGA
AGCCTCGTCGCAACTCCACGCCCCAGGTGGAGTCGCAGCACGCAAGCTTT
CTAGACCAT
BO15784.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:57:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15096-RB | 1428 | CG15096-PB | 1..1425 | 17..1441 | 7125 | 100 | Plus |
| CG15096-RC | 1476 | CG15096-PC | 89..1473 | 57..1441 | 6925 | 100 | Plus |
| CG15096-RA | 1476 | CG15096-PA | 89..1473 | 57..1441 | 6925 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:57:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15096-RB | 1783 | CG15096-RB | 100..1524 | 17..1441 | 7125 | 100 | Plus |
| CG15096-RC | 3536 | CG15096-RC | 1893..3277 | 57..1441 | 6925 | 100 | Plus |
| CG15096-RA | 2060 | CG15096-RA | 417..1801 | 57..1441 | 6925 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:57:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18808890..18809975 | 1279..194 | 5430 | 100 | Minus |
| 2R | 25286936 | 2R | 18808615..18808778 | 1441..1278 | 820 | 100 | Minus |
| 2R | 25286936 | 2R | 18810041..18810180 | 194..55 | 700 | 100 | Minus |
| 2R | 25286936 | 2R | 18811322..18811361 | 56..17 | 200 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 19:57:27 has no hits.
BO15784.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:24 Download gff for
BO15784.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15096-RB | 1..1428 | 17..1442 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:08:08 Download gff for
BO15784.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15096-RB | 95..1522 | 10..1441 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:04:53 Download gff for
BO15784.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15096-RB | 100..1524 | 17..1443 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:24 Download gff for
BO15784.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15096-RB | 95..1522 | 10..1441 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:11:33 Download gff for
BO15784.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15096-RB | 100..1524 | 17..1443 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:11:33 Download gff for
BO15784.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18808613..18808776 | 1280..1443 | 98 | <- | Minus |
| 2R | 18808890..18809975 | 194..1279 | 100 | <- | Minus |
| 2R | 18810042..18810178 | 57..193 | 100 | <- | Minus |
| 2R | 18811322..18811361 | 17..56 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:04:53 Download gff for
BO15784.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14697547..14697683 | 57..193 | 100 | <- | Minus |
| arm_2R | 14698827..14698866 | 17..56 | 100 | | Minus |
| arm_2R | 14696118..14696281 | 1280..1443 | 98 | <- | Minus |
| arm_2R | 14696395..14697480 | 194..1279 | 100 | <- | Minus |
BO15784.pep Sequence
Translation from 16 to 1459
> BO15784.pep
MVTTVKNRRFEDEDSGLGVRHFQVLLLFFALTVAYGCRVNLSVAVVAMTD
AASVNPDFPEYNWSEKTKSLLLSSFFWGYVITQVPAGQLARKYGGKVMIL
SGLAICSILNILTPICAKIGGWQLVCALRVVEGLCQGVVFPSTHTILSQW
APPKERATLGTCAYSGNQFGTILMLATSGVIAASPIGWPSIFYISGGIGC
VWSVVYFFFGAGSPQECKSISAEEKKLIEMSQADEVSGGQEQPKEQLPTP
WLSFFTSPAFLVLIVSHSVHNWGFWTLLTEIPSYMKNILGKDIKSNALLS
SLPYVCMFAMSFVFSSISAQLNNRNCISRSTSRKLFNSIGLWIPMVTLVG
LGYVNPDQSELAVVLLCFTVGMNGATYLGFNTNHIDLSPNFAGILMGITN
GVANIMSIIAPLIVGFIVTNEHDPEQWRIVFFIAAGFYLVGNTLYVIFGK
ANVQPWNDPPAKPRRNSTPQVESQHASFLDH
BO15784.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:00:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15096-PB | 475 | CG15096-PB | 1..475 | 1..475 | 2494 | 100 | Plus |
| CG15096-PC | 491 | CG15096-PC | 18..491 | 6..475 | 2429 | 98.3 | Plus |
| CG15096-PA | 491 | CG15096-PA | 18..491 | 6..475 | 2429 | 98.3 | Plus |
| MFS15-PA | 497 | CG15094-PA | 25..471 | 18..460 | 1325 | 56.3 | Plus |
| MFS15-PB | 443 | CG15094-PB | 1..417 | 48..460 | 1219 | 55.4 | Plus |
