BO15787.complete Sequence
1678 bp assembled on 2007-03-23
GenBank Submission: FJ633585
> BO15787.complete
GAAGTTATCAGTCGACATGTCATCCGGACCGTTTTTTGTGGGCGTGGACG
TGGGCACGGGCAGTGCGAGGGCGGCCCTGGTCGCCTGCGATGGGCGTGTC
CTGGAGCAGGCGGTGCAGACGATCCAAACGTGGAATCCTGAGCCGGGCTA
CTACAACCAGTCATCCGATAATATATGGCAGTCCATCTGCCAGGTGGTGA
AGAAAGTCATTGGCGGCGTCGATAAGTCAAAAGTCAAGGGCATTGGCTTC
GATGCCACCTGCTCCTTGGTGGTTCTGGGCCCCCAGGGATCGCCGCTGAC
GGTGAGCAAGTCCGGTGAGGCGGAGCAGAACATAATCCTCTGGATGGACC
ATCGTGCCGAGCAGGAAACCCAAGAGATCAATGCCTTCAAGCACTCGCTG
CTGAAATATGTGGGTGGTCAGGTTTCGCTGGAAATGGAGGTTCCCAAATT
GCTGTGGCTGAAGAGGAATCTGTCACAGACTTTTGGAAATATTTGGAGGG
TCTTTGACCTGCCCGACTTTCTGACCTGGCGAGCCACTGGAGTGGACACC
CGATCACTTTGCTCGGTGGTGTGCAAGTGGAACTACGATGCAGCGAATGG
CAGTTGGAACAAGGAGTTCCTGAAGCAGGCGGACTTGGAGGAGTTGACAC
AGAATAACTTCGAGAAATTGGGCAGTGATGTCCAGCCGCCTGGCCGAACG
GTGGGCAAAGGACTCACGGCCAAGGCTGCTGGGGAACTGGGCTTATCCGC
CGGCACTGTGGTGAGCACCTCCCTAATCGATGCCCATGCTGGCGCCTTGG
GAATGTTTGGATGCCGCTCAAAGGAGTCCAAGGGTGCCGACGATGTCCAG
GGTAAAATGGCTCTGATTGCCGGTACATCCACCTGCCACATGAGCATCAC
CCGGAAGGCATGCTTCGCACAAGGTGTTTGGGGTCCCTATCAGGATGCCA
TTATTCCCGGCTACTTCCTAAACGAGGGTGGTCAGAGCATCGCAGGACAT
CTCCTAGATCACGTCCTCAAGTCGCATGAATCCTACGCCGAACTGAAATC
CCAATTGGGAGAGGATAAGTTTATCTACCAGCATCTTAATAAGTTGCTGC
CGGAACTGGCAGCAGCTCGAGGATTAAGCCAGGTGGGCTGTCTCACCCAG
GATGTCCATGTCTGGCCGGACTTGCATGGCAATCGGTCGCCCATCGCAGA
TCCCACGCTGCGAGGAGTGATTACTGGACTGGACATGACGCGAGGAACTG
AATCTCTGGCCATCAAATACTTGGCGTTCGTCCAAGCTCTGGCTTACGGC
ACACGTCACATTATTGAAAACCTTTACCAGTACGGTAGAGCTCCCTTTCA
AACGCTACTTTTCTGCGGGGGATTGGCCAAGAATCCTCTGTACGTACAAT
GTCATGCGGACATTTGCAATCTGCCCGCACTGATTCCGGATGAACAGGAA
ATGGTTCTGGTGGGCGCTGCTGCCTTGGGAGCCGCTGCCTCCGGCCACTT
CGACAGCTTGGAGAGCGCCTCGAAATCCATGGGTGGCACTGGCCAGCTGG
TGAAGCCGAACGCGGAAACGCTTGAGTTCCACAATCGCAAGTACAAGGTG
TTCCTGCAGCTGCTGGAGAACCAACGACAGTACAGGCGCATTATGCAGGC
AGACACAAAGGCAAGCTTTCTAGACCAT
BO15787.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:55:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11594-RE | 1647 | CG11594-PE | 1..1644 | 17..1660 | 8220 | 100 | Plus |
| CG11594-RD | 1647 | CG11594-PD | 1..1644 | 17..1660 | 8220 | 100 | Plus |
| CG11594-RC | 1647 | CG11594-PC | 1..1644 | 17..1660 | 8220 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:55:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11594-RE | 2123 | CG11594-RE | 384..2027 | 17..1660 | 8220 | 100 | Plus |
| CG11594-RD | 1879 | CG11594-RD | 140..1783 | 17..1660 | 8220 | 100 | Plus |
| CG11594-RC | 1944 | CG11594-RC | 205..1848 | 17..1660 | 8220 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:55:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4023690..4024708 | 1219..201 | 5095 | 100 | Minus |
| 3L | 28110227 | 3L | 4023276..4023494 | 1513..1295 | 1095 | 100 | Minus |
| 3L | 28110227 | 3L | 4024945..4025130 | 202..17 | 930 | 100 | Minus |
| 3L | 28110227 | 3L | 4023070..4023218 | 1660..1512 | 745 | 100 | Minus |
| 3L | 28110227 | 3L | 4023553..4023628 | 1294..1219 | 380 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:55:31 has no hits.
BO15787.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:11:08 Download gff for
BO15787.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11594-RC | 1..1647 | 17..1663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:29:10 Download gff for
BO15787.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11594-RC | 200..1846 | 14..1660 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:34:23 Download gff for
BO15787.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11594-RC | 205..1848 | 17..1662 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:11:08 Download gff for
BO15787.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11594-RC | 200..1846 | 14..1660 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:40:33 Download gff for
BO15787.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11594-RC | 205..1848 | 17..1662 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:40:33 Download gff for
BO15787.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4023067..4023216 | 1514..1662 | 98 | <- | Minus |
| 3L | 4023276..4023494 | 1295..1513 | 100 | <- | Minus |
| 3L | 4023553..4023627 | 1220..1294 | 100 | <- | Minus |
| 3L | 4023690..4024706 | 203..1219 | 100 | <- | Minus |
| 3L | 4024945..4025130 | 17..202 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:34:23 Download gff for
BO15787.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4023553..4023627 | 1220..1294 | 100 | <- | Minus |
| arm_3L | 4023067..4023216 | 1514..1662 | 98 | <- | Minus |
| arm_3L | 4023276..4023494 | 1295..1513 | 100 | <- | Minus |
| arm_3L | 4023690..4024706 | 203..1219 | 100 | <- | Minus |
| arm_3L | 4024945..4025130 | 17..202 | 100 | | Minus |
BO15787.pep Sequence
Translation from 16 to 1678
> BO15787.pep
MSSGPFFVGVDVGTGSARAALVACDGRVLEQAVQTIQTWNPEPGYYNQSS
DNIWQSICQVVKKVIGGVDKSKVKGIGFDATCSLVVLGPQGSPLTVSKSG
EAEQNIILWMDHRAEQETQEINAFKHSLLKYVGGQVSLEMEVPKLLWLKR
NLSQTFGNIWRVFDLPDFLTWRATGVDTRSLCSVVCKWNYDAANGSWNKE
FLKQADLEELTQNNFEKLGSDVQPPGRTVGKGLTAKAAGELGLSAGTVVS
TSLIDAHAGALGMFGCRSKESKGADDVQGKMALIAGTSTCHMSITRKACF
AQGVWGPYQDAIIPGYFLNEGGQSIAGHLLDHVLKSHESYAELKSQLGED
KFIYQHLNKLLPELAAARGLSQVGCLTQDVHVWPDLHGNRSPIADPTLRG
VITGLDMTRGTESLAIKYLAFVQALAYGTRHIIENLYQYGRAPFQTLLFC
GGLAKNPLYVQCHADICNLPALIPDEQEMVLVGAAALGAAASGHFDSLES
ASKSMGGTGQLVKPNAETLEFHNRKYKVFLQLLENQRQYRRIMQADTKAS
FLDH
BO15787.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:36:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11594-PE | 548 | CG11594-PE | 1..548 | 1..548 | 2873 | 100 | Plus |
| CG11594-PD | 548 | CG11594-PD | 1..548 | 1..548 | 2873 | 100 | Plus |
| CG11594-PC | 548 | CG11594-PC | 1..548 | 1..548 | 2873 | 100 | Plus |
| CG11594-PA | 548 | CG11594-PA | 1..548 | 1..548 | 2873 | 100 | Plus |
