Clone BO15792 Report

Search the DGRC for BO15792

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:157
Well:92
Vector:pDNR-Dual
Associated Gene/TranscriptCG13636-RA
Protein status:BO15792.pep: validated full length
Sequenced Size:592

Clone Sequence Records

BO15792.3prime Sequence

590 bp (590 high quality bases) assembled on 2006-05-30

> BO15792.3prime
ATGGTCTAGAAAGCTTGCGAAATGCTTTCGCATGTGGGCGGATACCAAAA
AGGGCGCCAGAAGTGAGCAGATCGAGACCAAGAAGCTGACCAGGCCCTGA
AGATTAGCTCCACTGCAGATGTCGTGCAGGATGTCCTCCACATATCCGTT
GTCGTTGTCGCAGAGACACAGCTTGGTCTTGCTGGACATGAACTTGGCCA
CTCCGATGGTGCGGTTGCTGTTCTCGTACTGGCACACCATTCCATCCTCG
CAGTCGTTGTTGCTGTTGCACTTGTGACGCAGGCCTTTCAGGACATCTGG
ACAGCTGCCAGCCGAAGGAGGCGAGTCGTCGCCGCATAGGCAACGCAGCT
TGTAGTCATTGGGATCCTTGACGCAGCTGGTGCGATCTATCGCCGTGCAA
TCATCGTGGGCACTGCACTCTCGTCCTTTAACAATTGGGACGTGCGTGGG
AGGCGGCTGATTGTTGGTCTTGCCAAAAGTGGTCAGAGCCGTGGAGCTGA
CCCCGAAGAGGATGATGAAGATGCCGAAGAGCATGGTCAGACTGCCGCAT
TGTGTGAAGCGCTTCAGGGGCTGCATGTCGACTGATAACT

BO15792.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:40:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG13636-PA 561 CG13636-RA 1..558 576..19 2790 100 Minus
CG13636-PB 225 CG13636-RB 1..222 240..19 1110 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:28:44
Subject Length Description Subject Range Query Range Score Percent Strand
sosie-RA 1738 CG13636-RA 393..950 576..19 2790 100 Minus
sosie-RC 635 CG13636-RC 86..499 432..19 2070 100 Minus
sosie-RB 1528 CG13636-RB 328..740 431..19 2065 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:28:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24839311..24839489 286..108 895 100 Minus
3R 32079331 3R 24838050..24838198 432..284 745 100 Minus
3R 32079331 3R 24837073..24837221 576..428 730 99.3 Minus
3R 32079331 3R 24839610..24839700 109..19 455 100 Minus
Blast to na_te.dros performed on 2015-01-30 18:28:40 has no hits.

BO15792.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:54:25 Download gff for BO15792.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13636-PA 1..561 18..576 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:59:30 Download gff for BO15792.3prime
Subject Subject Range Query Range Percent Splice Strand
CG13636-PA 1..561 18..576 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:58:37 Download gff for BO15792.3prime
Subject Subject Range Query Range Percent Splice Strand
sosie-RA 393..950 19..576 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:11:59 Download gff for BO15792.3prime
Subject Subject Range Query Range Percent Splice Strand
sosie-RA 393..950 19..576 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:11:59 Download gff for BO15792.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 24837073..24837217 432..576 100 -> Minus
3R 24838051..24838197 285..431 100 -> Minus
3R 24839313..24839489 108..284 100 -> Minus
3R 24839612..24839700 19..107 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:58:37 Download gff for BO15792.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20662795..20662939 432..576 100 -> Minus
arm_3R 20663773..20663919 285..431 100 -> Minus
arm_3R 20665035..20665211 108..284 100 -> Minus
arm_3R 20665334..20665422 19..107 100   Minus

BO15792.5prime Sequence

590 bp (590 high quality bases) assembled on 2006-05-30

> BO15792.5prime
GAAGTTATCAGTCGACATGCAGCCCCTGAAGCGCTTCACACAATGCGGCA
GTCTGACCATGCTCTTCGGCATCTTCATCATCCTCTTCGGGGTCAGCTCC
ACGGCTCTGACCACTTTTGGCAAGACCAACAATCAGCCGCCTCCCACGCA
CGTCCCAATTGTTAAAGGACGAGAGTGCAGTGCCCACGATGATTGCACGG
CGATAGATCGCACCAGCTGCGTCAAGGATCCCAATGACTACAAGCTGCGT
TGCCTATGCGGCGACGACTCGCCTCCTTCGGCTGGCAGCTGTCCAGATGT
CCTGAAAGGCCTGCGTCACAAGTGCAACAGCAACAACGACTGCGAGGATG
GAATGGTGTGCCAGTACGAGAACAGCAACCGCACCATCGGAGTGGCCAAG
TTCATGTCCAGCAAGACCAAGCTGTGTCTCTGCGACAACGACAACGGATA
TGTGGAGGACATCCTGCACGACATCTGCAGTGGAGCTAATCTTCAGGGCC
TGGTCAGCTTCTTGGTCTCGATCTGCTCACTTCTGGCGCCCTTTTTGGTA
TCCGCCCACATGCGAAAGCATTTCGCAAGCTTTCTAGACC

BO15792.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:40:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG13636-PA 561 CG13636-RA 1..558 17..574 2790 100 Plus
CG13636-PB 225 CG13636-RB 1..222 353..574 1110 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:00:59
Subject Length Description Subject Range Query Range Score Percent Strand
sosie-RA 1738 CG13636-RA 393..950 17..574 2790 100 Plus
sosie-RC 635 CG13636-RC 86..499 161..574 2070 100 Plus
sosie-RB 1528 CG13636-RB 328..740 162..574 2065 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:00:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24839311..24839489 307..485 895 100 Plus
3R 32079331 3R 24838050..24838198 161..309 745 100 Plus
3R 32079331 3R 24837073..24837221 17..165 730 99.3 Plus
3R 32079331 3R 24839610..24839700 484..574 455 100 Plus
Blast to na_te.dros performed on 2015-02-12 05:00:56 has no hits.

BO15792.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:54:26 Download gff for BO15792.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13636-PA 1..561 17..575 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:59:31 Download gff for BO15792.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13636-PA 1..561 17..575 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 02:53:40 Download gff for BO15792.5prime
Subject Subject Range Query Range Percent Splice Strand
sosie-RA 393..950 17..574 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:18:38 Download gff for BO15792.5prime
Subject Subject Range Query Range Percent Splice Strand
sosie-RA 393..950 17..574 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:18:38 Download gff for BO15792.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 24839612..24839700 486..574 100   Plus
3R 24837073..24837217 17..161 100 -> Plus
3R 24838051..24838197 162..308 100 -> Plus
3R 24839313..24839489 309..485 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:53:40 Download gff for BO15792.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20662795..20662939 17..161 100 -> Plus
arm_3R 20663773..20663919 162..308 100 -> Plus
arm_3R 20665035..20665211 309..485 100 -> Plus
arm_3R 20665334..20665422 486..574 100   Plus

BO15792.complete Sequence

592 bp (592 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633587

> BO15792.complete
GAAGTTATCAGTCGACATGCAGCCCCTGAAGCGCTTCACACAATGCGGCA
GTCTGACCATGCTCTTCGGCATCTTCATCATCCTCTTCGGGGTCAGCTCC
ACGGCTCTGACCACTTTTGGCAAGACCAACAATCAGCCGCCTCCCACGCA
CGTCCCAATTGTTAAAGGACGAGAGTGCAGTGCCCACGATGATTGCACGG
CGATAGATCGCACCAGCTGCGTCAAGGATCCCAATGACTACAAGCTGCGT
TGCCTATGCGGCGACGACTCGCCTCCTTCGGCTGGCAGCTGTCCAGATGT
CCTGAAAGGCCTGCGTCACAAGTGCAACAGCAACAACGACTGCGAGGATG
GAATGGTGTGCCAGTACGAGAACAGCAACCGCACCATCGGAGTGGCCAAG
TTCATGTCCAGCAAGACCAAGCTGTGTCTCTGCGACAACGACAACGGATA
TGTGGAGGACATCCTGCACGACATCTGCAGTGGAGCTAATCTTCAGGGCC
TGGTCAGCTTCTTGGTCTCGATCTGCTCACTTCTGGCGCCCTTTTTGGTA
TCCGCCCACATGCGAAAGCATTTCGCAAGCTTTCTAGACCAT

BO15792.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:54:56
Subject Length Description Subject Range Query Range Score Percent Strand
sosie-RA 561 CG13636-PA 1..558 17..574 2790 100 Plus
sosie-RC 225 CG13636-PC 1..222 353..574 1110 100 Plus
sosie-RB 225 CG13636-PB 1..222 353..574 1110 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:54:57
Subject Length Description Subject Range Query Range Score Percent Strand
sosie-RA 1738 CG13636-RA 393..950 17..574 2790 100 Plus
sosie-RC 635 CG13636-RC 86..499 161..574 2070 100 Plus
sosie-RB 1528 CG13636-RB 328..740 162..574 2065 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:54:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24839311..24839489 307..485 895 100 Plus
3R 32079331 3R 24838050..24838198 161..309 745 100 Plus
3R 32079331 3R 24837073..24837221 17..165 730 99.3 Plus
3R 32079331 3R 24839610..24839700 484..574 455 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:54:55 has no hits.

BO15792.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:13:58 Download gff for BO15792.complete
Subject Subject Range Query Range Percent Splice Strand
CG13636-RA 1..561 17..575 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:32:44 Download gff for BO15792.complete
Subject Subject Range Query Range Percent Splice Strand
CG13636-RA 394..951 17..574 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:28:26 Download gff for BO15792.complete
Subject Subject Range Query Range Percent Splice Strand
sosie-RA 393..950 17..576 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:13:58 Download gff for BO15792.complete
Subject Subject Range Query Range Percent Splice Strand
CG13636-RA 394..951 17..574 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:58:58 Download gff for BO15792.complete
Subject Subject Range Query Range Percent Splice Strand
sosie-RA 393..950 17..576 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:58:58 Download gff for BO15792.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24837073..24837217 17..161 100 -> Plus
3R 24838051..24838197 162..308 100 -> Plus
3R 24839313..24839489 309..485 100 -> Plus
3R 24839612..24839700 486..576 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:28:26 Download gff for BO15792.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20665035..20665211 309..485 100 -> Plus
arm_3R 20665334..20665422 486..576 97   Plus
arm_3R 20662795..20662939 17..161 100 -> Plus
arm_3R 20663773..20663919 162..308 100 -> Plus

BO15792.pep Sequence

Translation from 16 to 592

> BO15792.pep
MQPLKRFTQCGSLTMLFGIFIILFGVSSTALTTFGKTNNQPPPTHVPIVK
GRECSAHDDCTAIDRTSCVKDPNDYKLRCLCGDDSPPSAGSCPDVLKGLR
HKCNSNNDCEDGMVCQYENSNRTIGVAKFMSSKTKLCLCDNDNGYVEDIL
HDICSGANLQGLVSFLVSICSLLAPFLVSAHMRKHFASFLDH

BO15792.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:16:15
Subject Length Description Subject Range Query Range Score Percent Strand
sosie-PA 186 CG13636-PA 1..186 1..186 1014 100 Plus
sosie-PC 74 CG13636-PC 1..74 113..186 391 100 Plus
sosie-PB 74 CG13636-PB 1..74 113..186 391 100 Plus