Clone BO15801 Report

Search the DGRC for BO15801

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:158
Well:1
Vector:pDNR-Dual
Associated Gene/TranscriptCG32240-RA
Protein status:BO15801.pep: validated full length
Sequenced Size:469

Clone Sequence Records

BO15801.3prime Sequence

467 bp (467 high quality bases) assembled on 2006-06-02

> BO15801.3prime
ATGGTCTAGAAAGCTTGCATCTTCTCCAGCACTTGGTTCGGCCACCTGCT
GCTGATCGGCCAAGTTATGCCTGAGTGGATATAGCTGCTCCATGTGTTCT
ATAAAGGGTCGAATACCATCCGGATTCTTCATGTACTTGGCCACGCTGAG
GATGATGTGGCGGTAGATCTGGTGATCCCGATAGGCCGCATTCGGTCGTC
GCTTTTGTGGCGGTCGCTCTTGAGCTCTTTGAATCACCCGTCGTCGTCGC
ACTGATTCAGTTCTTCGGCAGCGCTCACAATAAGCGAAATATGCACAAGT
GATGATTACCAGTGCGGAAAGTGCGTAGATGAGCCAACTCCAGCTGAGAA
CCGTCACAAATGTAGCATTCAAATCCCTCCAGATGGGCGAGATCTGCTCC
AGCTGGGTCTTTTTGGCATCCCTCCTCCAGAACACAAATTGAGGCATCAT
CATGTCGACTGATAACT

BO15801.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:40:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG32240-PA 438 CG32240-RA 1..435 453..19 2175 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:18:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG32240-RA 645 CG32240-RA 144..578 453..19 2175 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 07:17:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4380931..4381127 19..215 985 100 Plus
3L 28110227 3L 4381190..4381327 215..352 690 100 Plus
3L 28110227 3L 4381385..4381486 352..453 510 100 Plus
Blast to na_te.dros performed on 2015-02-03 07:18:03 has no hits.

BO15801.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:54:32 Download gff for BO15801.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32240-PA 1..438 18..453 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:59:37 Download gff for BO15801.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32240-PA 1..438 18..453 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:37:25 Download gff for BO15801.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32240-RA 130..578 19..467 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:43:30 Download gff for BO15801.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32240-RA 130..578 19..467 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:43:30 Download gff for BO15801.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 4380931..4381126 19..214 100 <- Plus
3L 4381190..4381327 215..352 100 <- Plus
3L 4381386..4381500 353..467 95   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:37:25 Download gff for BO15801.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4380931..4381126 19..214 100 <- Plus
arm_3L 4381190..4381327 215..352 100 <- Plus
arm_3L 4381386..4381500 353..467 95   Plus

BO15801.5prime Sequence

467 bp (467 high quality bases) assembled on 2006-05-30

> BO15801.5prime
GAAGTTATCAGTCGACATGATGATGCCTCAATTTGTGTTCTGGAGGAGGG
ATGCCAAAAAGACCCAGCTGGAGCAGATCTCGCCCATCTGGAGGGATTTG
AATGCTACATTTGTGACGGTTCTCAGCTGGAGTTGGCTCATCTACGCACT
TTCCGCACTGGTAATCATCACTTGTGCATATTTCGCTTATTGTGAGCGCT
GCCGAAGAACTGAATCAGTGCGACGACGACGGGTGATTCAAAGAGCTCAA
GAGCGACCGCCACAAAAGCGACGACCGAATGCGGCCTATCGGGATCACCA
GATCTACCGCCACATCATCCTCAGCGTGGCCAAGTACATGAAGAATCCGG
ATGGTATTCGACCCTTTATAGAACACATGGAGCAGCTATATCCACTCAGG
CATAACTTGGCCGATCAGCAGCAGGTGGCCGAACCAAGTGCTGGAGAAGA
TGCAAGCTTTCTAGACC

BO15801.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:40:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG32240-PA 438 CG32240-RA 1..435 17..451 2175 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:23:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG32240-RA 645 CG32240-RA 144..578 17..451 2175 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:23:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4380931..4381127 451..255 985 100 Minus
3L 28110227 3L 4381190..4381327 255..118 690 100 Minus
3L 28110227 3L 4381385..4381486 118..17 510 100 Minus
Blast to na_te.dros performed on 2015-02-10 20:23:16 has no hits.

BO15801.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:54:33 Download gff for BO15801.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32240-PA 1..438 17..452 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:59:39 Download gff for BO15801.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32240-PA 1..438 17..452 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 02:32:28 Download gff for BO15801.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32240-RA 130..578 3..451 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:19:47 Download gff for BO15801.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32240-RA 130..578 3..451 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 22:19:47 Download gff for BO15801.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4380931..4381126 256..451 100 <- Minus
3L 4381190..4381327 118..255 100 <- Minus
3L 4381386..4381500 3..117 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 02:32:28 Download gff for BO15801.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4380931..4381126 256..451 100 <- Minus
arm_3L 4381190..4381327 118..255 100 <- Minus
arm_3L 4381386..4381500 3..117 95   Minus

BO15801.complete Sequence

469 bp (469 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633588

> BO15801.complete
GAAGTTATCAGTCGACATGATGATGCCTCAATTTGTGTTCTGGAGGAGGG
ATGCCAAAAAGACCCAGCTGGAGCAGATCTCGCCCATCTGGAGGGATTTG
AATGCTACATTTGTGACGGTTCTCAGCTGGAGTTGGCTCATCTACGCACT
TTCCGCACTGGTAATCATCACTTGTGCATATTTCGCTTATTGTGAGCGCT
GCCGAAGAACTGAATCAGTGCGACGACGACGGGTGATTCAAAGAGCTCAA
GAGCGACCGCCACAAAAGCGACGACCGAATGCGGCCTATCGGGATCACCA
GATCTACCGCCACATCATCCTCAGCGTGGCCAAGTACATGAAGAATCCGG
ATGGTATTCGACCCTTTATAGAACACATGGAGCAGCTATATCCACTCAGG
CATAACTTGGCCGATCAGCAGCAGGTGGCCGAACCAAGTGCTGGAGAAGA
TGCAAGCTTTCTAGACCAT

BO15801.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:36:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG32240-RA 438 CG32240-PA 1..435 17..451 2175 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:36:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG32240-RA 645 CG32240-RA 144..578 17..451 2175 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:36:48
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4380931..4381127 451..255 985 100 Minus
3L 28110227 3L 4381190..4381327 255..118 690 100 Minus
3L 28110227 3L 4381385..4381486 118..17 510 100 Minus
Blast to na_te.dros performed on 2014-11-28 00:36:49 has no hits.

BO15801.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:07:25 Download gff for BO15801.complete
Subject Subject Range Query Range Percent Splice Strand
CG32240-RA 1..438 17..452 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:02:56 Download gff for BO15801.complete
Subject Subject Range Query Range Percent Splice Strand
CG32240-RA 65..513 3..451 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:55:47 Download gff for BO15801.complete
Subject Subject Range Query Range Percent Splice Strand
CG32240-RA 144..578 17..453 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:07:25 Download gff for BO15801.complete
Subject Subject Range Query Range Percent Splice Strand
CG32240-RA 65..513 3..451 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:23:29 Download gff for BO15801.complete
Subject Subject Range Query Range Percent Splice Strand
CG32240-RA 144..578 17..453 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:23:29 Download gff for BO15801.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4380929..4381126 256..453 98 <- Minus
3L 4381190..4381327 118..255 100 <- Minus
3L 4381386..4381486 17..117 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:55:47 Download gff for BO15801.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4380929..4381126 256..453 98 <- Minus
arm_3L 4381190..4381327 118..255 100 <- Minus
arm_3L 4381386..4381486 17..117 100   Minus

BO15801.pep Sequence

Translation from 16 to 469

> BO15801.pep
MMMPQFVFWRRDAKKTQLEQISPIWRDLNATFVTVLSWSWLIYALSALVI
ITCAYFAYCERCRRTESVRRRRVIQRAQERPPQKRRPNAAYRDHQIYRHI
ILSVAKYMKNPDGIRPFIEHMEQLYPLRHNLADQQQVAEPSAGEDASFLD
H

BO15801.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:32:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG32240-PA 145 CG32240-PA 1..145 1..145 773 100 Plus