Clone BO15806 Report

Search the DGRC for BO15806

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:158
Well:6
Vector:pDNR-Dual
Associated Gene/TranscriptCG9628-RB
Protein status:BO15806.pep: validated full length
Sequenced Size:559

Clone Sequence Records

BO15806.3prime Sequence

557 bp (557 high quality bases) assembled on 2006-06-02

> BO15806.3prime
ATGGTCTAGAAAGCTTGCTTCTAGATCACCGTGGACACCTAAACGCAGGG
TGATGAGTATGTCCAGCAAGAAGACCAGCGAGGTAACCAAGGCAATCGAG
GCGGAAGCCATCACGAGATCCAAACGATGCATATTCGGGTGCCAGTAGTT
GCGATCCTTGGTGGTGGACCAATCCCGGAAAAGCAGGGCGGTTACGGCCA
CGAAGAGCACAAAGGCCACTAGATTCCACAAAGTAGCCGTACGCCATGGA
GTCAAATCACCGAAGAGCGCCATTATCAGATAGATTGCCGTGTAGATGGT
CAGTGCTCCAAAGGTCACATAGCAAAGGGAAGCCACTCGGGGAGTGATGA
ACACCCGCAGATGAGAATTGGTGGCCGGCTCGTCGATCAGACCCAAACAG
CATATAAGCAGGCACAGTTCCACAATCTTGATGCATATCACCGTGTAGGT
GGCCTTTTTGTTTCCATGAGTTGTGGCAAAGGAATTATCGTCAGCCGGCG
ACATTTCGACGCGTGAGATTTCTATCGATCGCAAGTAGCTCATGTCGACT
GATAACT

BO15806.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:40:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG9628-PB 528 CG9628-RB 1..525 543..19 2625 100 Minus
CG9628-PA 489 CG9628-RA 1..486 504..19 2430 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:05:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG9628-RC 890 CG9628-RC 173..697 543..19 2625 100 Minus
CG9628-RB 1053 CG9628-RB 145..669 543..19 2625 100 Minus
CG9628-RA 1125 CG9628-RA 239..741 521..19 2515 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:05:30
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14627556..14627790 253..19 1175 100 Minus
3L 28110227 3L 14627334..14627496 415..253 815 100 Minus
3L 28110227 3L 14627018..14627126 523..415 545 100 Minus
Blast to na_te.dros performed 2015-02-10 22:05:33
Subject Length Description Subject Range Query Range Score Percent Strand
transib4 2656 transib4 TRANSIB4 2656bp 1981..2031 530..481 126 74.5 Minus

BO15806.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:54:36 Download gff for BO15806.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9628-PB 1..528 16..543 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:59:43 Download gff for BO15806.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9628-PB 1..528 16..543 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 07:42:40 Download gff for BO15806.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9628-RB 137..669 19..552 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:56:25 Download gff for BO15806.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9628-RB 137..669 19..552 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:56:25 Download gff for BO15806.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 14627556..14627790 19..253 100   Minus
3L 14627020..14627126 415..521 100 -> Minus
3L 14627335..14627495 254..414 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:42:40 Download gff for BO15806.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14620120..14620226 415..521 100 -> Minus
arm_3L 14620435..14620595 254..414 100 -> Minus
arm_3L 14620656..14620890 19..253 100   Minus

BO15806.5prime Sequence

557 bp (557 high quality bases) assembled on 2006-05-30

> BO15806.5prime
GAAGTTATCAGTCGACATGAGCTACTTGCGATCGATAGAAATCTCACGCG
TCGAAATGTCGCCGGCTGACGATAATTCCTTTGCCACAACTCATGGAAAC
AAAAAGGCCACCTACACGGTGATATGCATCAAGATTGTGGAACTGTGCCT
GCTTATATGCTGTTTGGGTCTGATCGACGAGCCGGCCACCAATTCTCATC
TGCGGGTGTTCATCACTCCCCGAGTGGCTTCCCTTTGCTATGTGACCTTT
GGAGCACTGACCATCTACACGGCAATCTATCTGATAATGGCGCTCTTCGG
TGATTTGACTCCATGGCGTACGGCTACTTTGTGGAATCTAGTGGCCTTTG
TGCTCTTCGTGGCCGTAACCGCCCTGCTTTTCCGGGATTGGTCCACCACC
AAGGATCGCAACTACTGGCACCCGAATATGCATCGTTTGGATCTCGTGAT
GGCTTCCGCCTCGATTGCCTTGGTTACCTCGCTGGTCTTCTTGCTGGACA
TACTCATCACCCTGCGTTTAGGTGTCCACGGTGATCTAGAAGCAAGCTTT
CTAGACC

BO15806.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:40:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG9628-PB 528 CG9628-RB 1..525 17..541 2625 100 Plus
CG9628-PA 489 CG9628-RA 1..486 56..541 2430 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:08:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG9628-RC 890 CG9628-RC 173..697 17..541 2625 100 Plus
CG9628-RB 1053 CG9628-RB 145..669 17..541 2625 100 Plus
CG9628-RA 1125 CG9628-RA 239..741 39..541 2515 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:08:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14627556..14627790 307..541 1175 100 Plus
3L 28110227 3L 14627334..14627496 145..307 815 100 Plus
3L 28110227 3L 14627018..14627126 37..145 545 100 Plus
Blast to na_te.dros performed 2015-02-11 13:08:21
Subject Length Description Subject Range Query Range Score Percent Strand
transib4 2656 transib4 TRANSIB4 2656bp 1981..2031 30..79 126 74.5 Plus

BO15806.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:54:37 Download gff for BO15806.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9628-PB 1..528 17..544 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:59:45 Download gff for BO15806.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9628-PB 1..528 17..544 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 04:07:06 Download gff for BO15806.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9628-RB 137..669 8..541 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:40:16 Download gff for BO15806.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9628-RB 137..669 8..541 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:40:16 Download gff for BO15806.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 14627020..14627126 39..145 100 -> Plus
3L 14627335..14627495 146..306 100 -> Plus
3L 14627556..14627790 307..541 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 04:07:06 Download gff for BO15806.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14620120..14620226 39..145 100 -> Plus
arm_3L 14620435..14620595 146..306 100 -> Plus
arm_3L 14620656..14620890 307..541 100   Plus

BO15806.complete Sequence

559 bp (559 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ638742

> BO15806.complete
GAAGTTATCAGTCGACATGAGCTACTTGCGATCGATAGAAATCTCACGCG
TCGAAATGTCGCCGGCTGACGATAATTCCTTTGCCACAACTCATGGAAAC
AAAAAGGCCACCTACACGGTGATATGCATCAAGATTGTGGAACTGTGCCT
GCTTATATGCTGTTTGGGTCTGATCGACGAGCCGGCCACCAATTCTCATC
TGCGGGTGTTCATCACTCCCCGAGTGGCTTCCCTTTGCTATGTGACCTTT
GGAGCACTGACCATCTACACGGCAATCTATCTGATAATGGCGCTCTTCGG
TGATTTGACTCCATGGCGTACGGCTACTTTGTGGAATCTAGTGGCCTTTG
TGCTCTTCGTGGCCGTAACCGCCCTGCTTTTCCGGGATTGGTCCACCACC
AAGGATCGCAACTACTGGCACCCGAATATGCATCGTTTGGATCTCGTGAT
GGCTTCCGCCTCGATTGCCTTGGTTACCTCGCTGGTCTTCTTGCTGGACA
TACTCATCACCCTGCGTTTAGGTGTCCACGGTGATCTAGAAGCAAGCTTT
CTAGACCAT

BO15806.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:08:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG9628-RC 528 CG9628-PC 1..525 17..541 2625 100 Plus
CG9628-RB 528 CG9628-PB 1..525 17..541 2625 100 Plus
CG9628-RA 489 CG9628-PA 1..486 56..541 2430 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:08:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG9628-RC 890 CG9628-RC 173..697 17..541 2625 100 Plus
CG9628-RB 1053 CG9628-RB 145..669 17..541 2625 100 Plus
CG9628-RA 1125 CG9628-RA 239..741 39..541 2515 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:08:38
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14627556..14627790 307..541 1175 100 Plus
3L 28110227 3L 14627334..14627496 145..307 815 100 Plus
3L 28110227 3L 14627018..14627126 37..145 545 100 Plus
Blast to na_te.dros performed 2014-11-28 01:08:39
Subject Length Description Subject Range Query Range Score Percent Strand
transib4 2656 transib4 TRANSIB4 2656bp 1981..2031 30..79 126 74.5 Plus

BO15806.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:17 Download gff for BO15806.complete
Subject Subject Range Query Range Percent Splice Strand
CG9628-RB 1..528 17..544 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:07:59 Download gff for BO15806.complete
Subject Subject Range Query Range Percent Splice Strand
CG9628-RB 125..657 8..541 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:40:14 Download gff for BO15806.complete
Subject Subject Range Query Range Percent Splice Strand
CG9628-RB 145..669 17..543 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:18 Download gff for BO15806.complete
Subject Subject Range Query Range Percent Splice Strand
CG9628-RB 125..657 8..541 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:45:41 Download gff for BO15806.complete
Subject Subject Range Query Range Percent Splice Strand
CG9628-RB 145..669 17..543 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:45:41 Download gff for BO15806.complete
Subject Subject Range Query Range Percent Splice Strand
3L 14626873..14626894 17..38 100 -> Plus
3L 14627020..14627126 39..145 100 -> Plus
3L 14627335..14627495 146..306 100 -> Plus
3L 14627556..14627790 307..543 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:40:14 Download gff for BO15806.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14619973..14619994 17..38 100 -> Plus
arm_3L 14620120..14620226 39..145 100 -> Plus
arm_3L 14620435..14620595 146..306 100 -> Plus
arm_3L 14620656..14620890 307..543 99   Plus

BO15806.pep Sequence

Translation from 16 to 559

> BO15806.pep
MSYLRSIEISRVEMSPADDNSFATTHGNKKATYTVICIKIVELCLLICCL
GLIDEPATNSHLRVFITPRVASLCYVTFGALTIYTAIYLIMALFGDLTPW
RTATLWNLVAFVLFVAVTALLFRDWSTTKDRNYWHPNMHRLDLVMASASI
ALVTSLVFLLDILITLRLGVHGDLEASFLDH

BO15806.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:01:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG9628-PC 175 CG9628-PC 1..175 1..175 904 100 Plus
CG9628-PB 175 CG9628-PB 1..175 1..175 904 100 Plus
CG9628-PA 162 CG9628-PA 1..162 14..175 844 100 Plus