Clone BO15814 Report

Search the DGRC for BO15814

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:158
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptSpn77Bc-RA
Protein status:BO15814.pep: validated full length
Sequenced Size:1282

Clone Sequence Records

BO15814.complete Sequence

1282 bp (1282 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633592

> BO15814.complete
GAAGTTATCAGTCGACATGAAGCTCGGATTTCTGGGCCTTTTTGGCATGG
TGCTCAGTTTGCGGGCCCATATATGTGCAAATACTGTTGATACGAAGAGT
CTATTACAAAAAATGACGGACGCAAGGCTTCAATTTGCCCTCAACCTGCT
GCAAATGGAATCCACGCATTTAAACCTGGAAAACTTTGCGATGACGCCAT
TTTCCACGTGGTCACTTATGATCATGTTCTACGAGGGAGCAGAGGGGACT
ACCTTGAAGCAGATACGTGATGTCCTGGCGATCTATGTCGATTATCCAAC
ACTGCGCAGGTGGTACGAGGATGTCCGAGCTTATCACTATTTAAATTCGG
AAAACACAAAACTGTTTTCGCTGCGTTACGCTTACTACGACGATGTAGGA
GATTTAGAACTCGTGAAAGGGTACAACAGTGTAGTCCTAGAAGGAGTAGG
AGAAGGAAATGTGGTTCTTCGAGAGGGTCGGCCAAGGGGTGTGGACTTCG
ACCAGGGGGCGAGTATAATTATCAACGACGATATCGACAAAGCCTCTCAT
GCGAAAATCTTCAGTTCTTATAGCCGTCGTTCGTTCAATAGTACAGTAAC
TGTGCTGGGGATTACTGTTAGCTACTTTAAGGCCAAATGGAAGTATCCAT
TCGATAAGTCCCAGACGAAAGTGGAACAGTTTTACAACGCCGGCGGCTCG
CCGGCAGGTAAGGTGGAGATGATGGTGCAAACGGGGAAGTATGCCTACGT
CAATAATGTAAAGGGTCTGCAAGCGGATGTCCTGGAGCTACCTTTTGGGG
AACATGAGCTAGTAATGATCGTCATACTGCCGAAGCCTTCCCAGAGAGTA
AGCCTGGTGCTCAAACAATTGAAGAACCTGGGACTACATCGCCTCCTTGA
GGAACTCGAGGCCTCCAAGAATGAATCTGATGTAGAAGTCAAGCTTCCCA
AGTTCGATACGCGATCCGTACTTTCACTCGAAGATACCGTATATGAGGCT
GGACTAACGGATCTGAGAAATGAGTTCGCAGATCTAGGTCGCATGCTGAT
TCCTACCGGGGACAGAGGTGCGTACCTCTCCCTCTACCACCAATTCGCCA
GGATCGTCGTAGATGAAGAGGGCTTGCCTAATGCTGTTCCGCAGAAATCT
TCTGGAACAAATAACATCAAGTTCCATATAAACAGGCCGTTTGCATACCT
TGTCCTACAAAGAACACACAAATTGCTCATTCACTCCGGAGTCTTTCGGG
AAGGTGAGATCCAGGCAAGCTTTCTAGACCAT

BO15814.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:24:03
Subject Length Description Subject Range Query Range Score Percent Strand
Spn77Bc-RB 1251 CG6289-PB 1..1248 17..1264 6240 100 Plus
Spn77Bc-RA 1251 CG6289-PA 1..1248 17..1264 6240 100 Plus
Spn77Bb-RA 1089 CG6663-PA 40..1086 218..1264 4545 95.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:24:04
Subject Length Description Subject Range Query Range Score Percent Strand
Spn77Bc-RB 1430 CG6289-RB 40..1287 17..1264 6240 100 Plus
Spn77Bc-RA 1440 CG6289-RA 50..1297 17..1264 6240 100 Plus
Spn77Bb-RA 1161 CG6663-RA 74..1120 218..1264 4545 95.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:24:02
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20343497..20343853 642..998 1785 100 Plus
3L 28110227 3L 20342738..20343060 17..339 1615 100 Plus
3L 28110227 3L 20321638..20321992 642..996 1610 96.9 Plus
3L 28110227 3L 20343128..20343431 340..643 1520 100 Plus
3L 28110227 3L 20321269..20321572 340..643 1490 99.3 Plus
3L 28110227 3L 20343908..20344176 996..1264 1345 100 Plus
3L 28110227 3L 20322049..20322317 996..1264 1030 92.2 Plus
3L 28110227 3L 20321080..20321201 218..339 445 91 Plus
3L 28110227 3L 20321041..20321080 17..56 185 97.5 Plus
Blast to na_te.dros performed on 2014-11-26 22:24:03 has no hits.

BO15814.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:14 Download gff for BO15814.complete
Subject Subject Range Query Range Percent Splice Strand
CG6289-RA 1..1251 17..1268 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:07:54 Download gff for BO15814.complete
Subject Subject Range Query Range Percent Splice Strand
CG6289-RA 33..1283 17..1268 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:56:46 Download gff for BO15814.complete
Subject Subject Range Query Range Percent Splice Strand
Spn77Bc-RA 50..1297 17..1266 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:14 Download gff for BO15814.complete
Subject Subject Range Query Range Percent Splice Strand
CG6289-RA 33..1283 17..1268 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:59:50 Download gff for BO15814.complete
Subject Subject Range Query Range Percent Splice Strand
Spn77Bc-RA 50..1297 17..1266 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:59:50 Download gff for BO15814.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20342738..20343060 17..339 100 -> Plus
3L 20343128..20343431 340..643 100 -> Plus
3L 20343499..20343852 644..997 100 -> Plus
3L 20343910..20344176 998..1266 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:56:46 Download gff for BO15814.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20335838..20336160 17..339 100 -> Plus
arm_3L 20336228..20336531 340..643 100 -> Plus
arm_3L 20336599..20336952 644..997 100 -> Plus
arm_3L 20337010..20337276 998..1266 99   Plus

BO15814.pep Sequence

Translation from 16 to 1282

> BO15814.pep
MKLGFLGLFGMVLSLRAHICANTVDTKSLLQKMTDARLQFALNLLQMEST
HLNLENFAMTPFSTWSLMIMFYEGAEGTTLKQIRDVLAIYVDYPTLRRWY
EDVRAYHYLNSENTKLFSLRYAYYDDVGDLELVKGYNSVVLEGVGEGNVV
LREGRPRGVDFDQGASIIINDDIDKASHAKIFSSYSRRSFNSTVTVLGIT
VSYFKAKWKYPFDKSQTKVEQFYNAGGSPAGKVEMMVQTGKYAYVNNVKG
LQADVLELPFGEHELVMIVILPKPSQRVSLVLKQLKNLGLHRLLEELEAS
KNESDVEVKLPKFDTRSVLSLEDTVYEAGLTDLRNEFADLGRMLIPTGDR
GAYLSLYHQFARIVVDEEGLPNAVPQKSSGTNNIKFHINRPFAYLVLQRT
HKLLIHSGVFREGEIQASFLDH

BO15814.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:01:25
Subject Length Description Subject Range Query Range Score Percent Strand
Spn77Bc-PB 416 CG6289-PB 1..416 1..416 2132 100 Plus
Spn77Bc-PA 416 CG6289-PA 1..416 1..416 2132 100 Plus
Spn77Bb-PA 362 CG6663-PA 13..362 67..416 1664 92 Plus
Spn77Ba-PC 450 CG6680-PC 79..445 40..411 472 33.3 Plus
Spn77Ba-PB 450 CG6680-PB 79..445 40..411 472 33.3 Plus