BO15814.complete Sequence
1282 bp (1282 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633592
> BO15814.complete
GAAGTTATCAGTCGACATGAAGCTCGGATTTCTGGGCCTTTTTGGCATGG
TGCTCAGTTTGCGGGCCCATATATGTGCAAATACTGTTGATACGAAGAGT
CTATTACAAAAAATGACGGACGCAAGGCTTCAATTTGCCCTCAACCTGCT
GCAAATGGAATCCACGCATTTAAACCTGGAAAACTTTGCGATGACGCCAT
TTTCCACGTGGTCACTTATGATCATGTTCTACGAGGGAGCAGAGGGGACT
ACCTTGAAGCAGATACGTGATGTCCTGGCGATCTATGTCGATTATCCAAC
ACTGCGCAGGTGGTACGAGGATGTCCGAGCTTATCACTATTTAAATTCGG
AAAACACAAAACTGTTTTCGCTGCGTTACGCTTACTACGACGATGTAGGA
GATTTAGAACTCGTGAAAGGGTACAACAGTGTAGTCCTAGAAGGAGTAGG
AGAAGGAAATGTGGTTCTTCGAGAGGGTCGGCCAAGGGGTGTGGACTTCG
ACCAGGGGGCGAGTATAATTATCAACGACGATATCGACAAAGCCTCTCAT
GCGAAAATCTTCAGTTCTTATAGCCGTCGTTCGTTCAATAGTACAGTAAC
TGTGCTGGGGATTACTGTTAGCTACTTTAAGGCCAAATGGAAGTATCCAT
TCGATAAGTCCCAGACGAAAGTGGAACAGTTTTACAACGCCGGCGGCTCG
CCGGCAGGTAAGGTGGAGATGATGGTGCAAACGGGGAAGTATGCCTACGT
CAATAATGTAAAGGGTCTGCAAGCGGATGTCCTGGAGCTACCTTTTGGGG
AACATGAGCTAGTAATGATCGTCATACTGCCGAAGCCTTCCCAGAGAGTA
AGCCTGGTGCTCAAACAATTGAAGAACCTGGGACTACATCGCCTCCTTGA
GGAACTCGAGGCCTCCAAGAATGAATCTGATGTAGAAGTCAAGCTTCCCA
AGTTCGATACGCGATCCGTACTTTCACTCGAAGATACCGTATATGAGGCT
GGACTAACGGATCTGAGAAATGAGTTCGCAGATCTAGGTCGCATGCTGAT
TCCTACCGGGGACAGAGGTGCGTACCTCTCCCTCTACCACCAATTCGCCA
GGATCGTCGTAGATGAAGAGGGCTTGCCTAATGCTGTTCCGCAGAAATCT
TCTGGAACAAATAACATCAAGTTCCATATAAACAGGCCGTTTGCATACCT
TGTCCTACAAAGAACACACAAATTGCTCATTCACTCCGGAGTCTTTCGGG
AAGGTGAGATCCAGGCAAGCTTTCTAGACCAT
BO15814.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:24:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Spn77Bc-RB | 1251 | CG6289-PB | 1..1248 | 17..1264 | 6240 | 100 | Plus |
Spn77Bc-RA | 1251 | CG6289-PA | 1..1248 | 17..1264 | 6240 | 100 | Plus |
Spn77Bb-RA | 1089 | CG6663-PA | 40..1086 | 218..1264 | 4545 | 95.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:24:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Spn77Bc-RB | 1430 | CG6289-RB | 40..1287 | 17..1264 | 6240 | 100 | Plus |
Spn77Bc-RA | 1440 | CG6289-RA | 50..1297 | 17..1264 | 6240 | 100 | Plus |
Spn77Bb-RA | 1161 | CG6663-RA | 74..1120 | 218..1264 | 4545 | 95.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:24:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20343497..20343853 | 642..998 | 1785 | 100 | Plus |
3L | 28110227 | 3L | 20342738..20343060 | 17..339 | 1615 | 100 | Plus |
3L | 28110227 | 3L | 20321638..20321992 | 642..996 | 1610 | 96.9 | Plus |
3L | 28110227 | 3L | 20343128..20343431 | 340..643 | 1520 | 100 | Plus |
3L | 28110227 | 3L | 20321269..20321572 | 340..643 | 1490 | 99.3 | Plus |
3L | 28110227 | 3L | 20343908..20344176 | 996..1264 | 1345 | 100 | Plus |
3L | 28110227 | 3L | 20322049..20322317 | 996..1264 | 1030 | 92.2 | Plus |
3L | 28110227 | 3L | 20321080..20321201 | 218..339 | 445 | 91 | Plus |
3L | 28110227 | 3L | 20321041..20321080 | 17..56 | 185 | 97.5 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:24:03 has no hits.
BO15814.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:14 Download gff for
BO15814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6289-RA | 1..1251 | 17..1268 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:07:54 Download gff for
BO15814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6289-RA | 33..1283 | 17..1268 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:56:46 Download gff for
BO15814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Spn77Bc-RA | 50..1297 | 17..1266 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:14 Download gff for
BO15814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6289-RA | 33..1283 | 17..1268 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:59:50 Download gff for
BO15814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Spn77Bc-RA | 50..1297 | 17..1266 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:59:50 Download gff for
BO15814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20342738..20343060 | 17..339 | 100 | -> | Plus |
3L | 20343128..20343431 | 340..643 | 100 | -> | Plus |
3L | 20343499..20343852 | 644..997 | 100 | -> | Plus |
3L | 20343910..20344176 | 998..1266 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:56:46 Download gff for
BO15814.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20335838..20336160 | 17..339 | 100 | -> | Plus |
arm_3L | 20336228..20336531 | 340..643 | 100 | -> | Plus |
arm_3L | 20336599..20336952 | 644..997 | 100 | -> | Plus |
arm_3L | 20337010..20337276 | 998..1266 | 99 | | Plus |
BO15814.pep Sequence
Translation from 16 to 1282
> BO15814.pep
MKLGFLGLFGMVLSLRAHICANTVDTKSLLQKMTDARLQFALNLLQMEST
HLNLENFAMTPFSTWSLMIMFYEGAEGTTLKQIRDVLAIYVDYPTLRRWY
EDVRAYHYLNSENTKLFSLRYAYYDDVGDLELVKGYNSVVLEGVGEGNVV
LREGRPRGVDFDQGASIIINDDIDKASHAKIFSSYSRRSFNSTVTVLGIT
VSYFKAKWKYPFDKSQTKVEQFYNAGGSPAGKVEMMVQTGKYAYVNNVKG
LQADVLELPFGEHELVMIVILPKPSQRVSLVLKQLKNLGLHRLLEELEAS
KNESDVEVKLPKFDTRSVLSLEDTVYEAGLTDLRNEFADLGRMLIPTGDR
GAYLSLYHQFARIVVDEEGLPNAVPQKSSGTNNIKFHINRPFAYLVLQRT
HKLLIHSGVFREGEIQASFLDH
BO15814.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:01:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Spn77Bc-PB | 416 | CG6289-PB | 1..416 | 1..416 | 2132 | 100 | Plus |
Spn77Bc-PA | 416 | CG6289-PA | 1..416 | 1..416 | 2132 | 100 | Plus |
Spn77Bb-PA | 362 | CG6663-PA | 13..362 | 67..416 | 1664 | 92 | Plus |
Spn77Ba-PC | 450 | CG6680-PC | 79..445 | 40..411 | 472 | 33.3 | Plus |
Spn77Ba-PB | 450 | CG6680-PB | 79..445 | 40..411 | 472 | 33.3 | Plus |