Clone BO15816 Report

Search the DGRC for BO15816

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:158
Well:16
Vector:pDNR-Dual
Associated Gene/TranscriptMf-RC
Protein status:BO15816.pep: validated full length
Sequenced Size:538

Clone Sequence Records

BO15816.3prime Sequence

536 bp (536 high quality bases) assembled on 2006-06-02

> BO15816.3prime
ATGGTCTAGAAAGCTTGCGAAAATGTCTTTGATATCCTTACCCTTGTTGA
GCTCAGCCAGCAGCTTGTCCTCTGGCTCGTACTCCAGGGGCACCAGCGAG
TTGGGCGTGAGTGGCTTGTCCCTCAAGTAGAGACCATAGCGAGATGGGTA
CCTGCGCTCGATCTCCTGCATGCGCTTCAGATGATCATTCCAGGCCTTCT
CTGCGTCGTAGTTAGCTGGAATTGTTCGGCTGTAGTGATGATCGTAGATG
GCACGGGGCGAGTAGCCGTAGGTGTCGCGGCTCACTGGCAGATATCTGTA
GCCAGAGGACTGGACGCGCTCATTGGCGGTGGCGGGCTCGTCATAGATGC
TCCTGTAGGAGGGCGAGTCCAGGTAGGAGCTGTAGGGACGAGAGGCACGG
GGCGCCTCGTGGGCACGGATATCCTCGGAGCCCTTCAGGGACCTGATGTA
GGACTGCCAGAATTTCGCCTTCTTGCTGGGGCTCTCATTGCGCCCAATCA
TTTCCAAGTGGTTTTTGAACATGTCGACTGATAACT

BO15816.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:40:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG6803-PC 507 Zeelin1-RC 1..504 522..19 2520 100 Minus
CG6803-PD 939 Zeelin1-RD 1..481 522..42 2405 100 Minus
CG6803-PE 501 Zeelin1-RE 1..481 522..42 2405 100 Minus
CG6803-PB 1098 Zeelin1-RB 1..481 522..42 2405 100 Minus
CG6803-PA 474 Zeelin1-RA 1..301 522..222 1505 100 Minus
CG6803-PA 474 Zeelin1-RA 302..460 200..42 795 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:15:42
Subject Length Description Subject Range Query Range Score Percent Strand
Mf-RQ 1440 CG6803-RQ 115..618 522..19 2520 100 Minus
Mf-RC 824 CG6803-RC 115..618 522..19 2520 100 Minus
Mf-RM 1939 CG553-RM 115..595 522..42 2405 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 07:15:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15178280..15178490 222..432 1055 100 Plus
3R 32079331 3R 15176161..15176295 19..153 675 100 Plus
3R 32079331 3R 15179038..15179129 431..522 460 100 Plus
3R 32079331 3R 15176362..15176437 150..225 365 98.7 Plus
Blast to na_te.dros performed on 2015-02-03 07:15:38 has no hits.

BO15816.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:54:41 Download gff for BO15816.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6803-PC 1..507 15..522 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:59:49 Download gff for BO15816.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6803-PC 1..507 15..522 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:37:02 Download gff for BO15816.3prime
Subject Subject Range Query Range Percent Splice Strand
Mf-RC 105..621 15..532 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:43:12 Download gff for BO15816.3prime
Subject Subject Range Query Range Percent Splice Strand
Mf-RC 105..621 15..532 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:43:12 Download gff for BO15816.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 15176157..15176293 15..151 98 <- Plus
3R 15176364..15176433 152..221 100 <- Plus
3R 15178280..15178489 222..431 100 <- Plus
3R 15179039..15179139 432..532 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:37:02 Download gff for BO15816.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11004761..11004861 432..532 96   Plus
arm_3R 11002086..11002155 152..221 100 <- Plus
arm_3R 11001879..11002015 15..151 98 <- Plus
arm_3R 11004002..11004211 222..431 100 <- Plus

BO15816.5prime Sequence

536 bp (536 high quality bases) assembled on 2006-05-30

> BO15816.5prime
GAAGTTATCAGTCGACATGTTCAAAAACCACTTGGAAATGATTGGGCGCA
ATGAGAGCCCCAGCAAGAAGGCGAAATTCTGGCAGTCCTACATCAGGTCC
CTGAAGGGCTCCGAGGATATCCGTGCCCACGAGGCGCCCCGTGCCTCTCG
TCCCTACAGCTCCTACCTGGACTCGCCCTCCTACAGGAGCATCTATGACG
AGCCCGCCACCGCCAATGAGCGCGTCCAGTCCTCTGGCTACAGATATCTG
CCAGTGAGCCGCGACACCTACGGCTACTCGCCCCGTGCCATCTACGATCA
TCACTACAGCCGAACAATTCCAGCTAACTACGACGCAGAGAAGGCCTGGA
ATGATCATCTGAAGCGCATGCAGGAGATCGAGCGCAGGTACCCATCTCGC
TATGGTCTCTACTTGAGGGACAAGCCACTCACGCCCAACTCGCTGGTGCC
CCTGGAGTACGAGCCAGAGGACAAGCTGCTGGCTGAGCTCAACAAGGGTA
AGGATATCAAAGACATTTTCGCAAGCTTTCTAGACC

BO15816.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:40:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG6803-PC 507 Zeelin1-RC 1..504 17..520 2520 100 Plus
CG6803-PD 939 Zeelin1-RD 1..481 17..497 2405 100 Plus
CG6803-PE 501 Zeelin1-RE 1..481 17..497 2405 100 Plus
CG6803-PB 1098 Zeelin1-RB 1..481 17..497 2405 100 Plus
CG6803-PA 474 Zeelin1-RA 1..301 17..317 1505 100 Plus
CG6803-PA 474 Zeelin1-RA 302..460 339..497 795 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 05:06:14
Subject Length Description Subject Range Query Range Score Percent Strand
Mf-RQ 1440 CG6803-RQ 115..618 17..520 2520 100 Plus
Mf-RC 824 CG6803-RC 115..618 17..520 2520 100 Plus
Mf-RM 1939 CG553-RM 115..595 17..497 2405 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:06:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15178280..15178490 317..107 1055 100 Minus
3R 32079331 3R 15176161..15176295 520..386 675 100 Minus
3R 32079331 3R 15179038..15179129 108..17 460 100 Minus
3R 32079331 3R 15176362..15176437 389..314 365 98.7 Minus
Blast to na_te.dros performed on 2015-02-12 05:06:12 has no hits.

BO15816.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:54:42 Download gff for BO15816.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6803-PC 1..507 17..524 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:59:50 Download gff for BO15816.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6803-PC 1..507 17..524 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 02:54:13 Download gff for BO15816.5prime
Subject Subject Range Query Range Percent Splice Strand
Mf-RC 105..621 7..524 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:30:10 Download gff for BO15816.5prime
Subject Subject Range Query Range Percent Splice Strand
Mf-RC 105..621 7..524 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:30:10 Download gff for BO15816.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 15176157..15176293 388..524 98 <- Minus
3R 15176364..15176433 318..387 100 <- Minus
3R 15178280..15178489 108..317 100 <- Minus
3R 15179039..15179139 7..107 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:54:13 Download gff for BO15816.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11001879..11002015 388..524 98 <- Minus
arm_3R 11002086..11002155 318..387 100 <- Minus
arm_3R 11004002..11004211 108..317 100 <- Minus
arm_3R 11004761..11004861 7..107 96   Minus

BO15816.complete Sequence

538 bp (538 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633593

> BO15816.complete
GAAGTTATCAGTCGACATGTTCAAAAACCACTTGGAAATGATTGGGCGCA
ATGAGAGCCCCAGCAAGAAGGCGAAATTCTGGCAGTCCTACATCAGGTCC
CTGAAGGGCTCCGAGGATATCCGTGCCCACGAGGCGCCCCGTGCCTCTCG
TCCCTACAGCTCCTACCTGGACTCGCCCTCCTACAGGAGCATCTATGACG
AGCCCGCCACCGCCAATGAGCGCGTCCAGTCCTCTGGCTACAGATATCTG
CCAGTGAGCCGCGACACCTACGGCTACTCGCCCCGTGCCATCTACGATCA
TCACTACAGCCGAACAATTCCAGCTAACTACGACGCAGAGAAGGCCTGGA
ATGATCATCTGAAGCGCATGCAGGAGATCGAGCGCAGGTACCCATCTCGC
TATGGTCTCTACTTGAGGGACAAGCCACTCACGCCCAACTCGCTGGTGCC
CCTGGAGTACGAGCCAGAGGACAAGCTGCTGGCTGAGCTCAACAAGGGTA
AGGATATCAAAGACATTTTCGCAAGCTTTCTAGACCAT

BO15816.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:22:58
Subject Length Description Subject Range Query Range Score Percent Strand
Mf-RQ 507 CG6803-PQ 1..504 17..520 2520 100 Plus
Mf-RC 507 CG6803-PC 1..504 17..520 2520 100 Plus
Mf-RM 1095 CG6803-PM 1..481 17..497 2405 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:22:59
Subject Length Description Subject Range Query Range Score Percent Strand
Mf-RQ 1440 CG6803-RQ 115..618 17..520 2520 100 Plus
Mf-RC 824 CG6803-RC 115..618 17..520 2520 100 Plus
Mf-RM 1939 CG553-RM 115..595 17..497 2405 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:22:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15178280..15178490 317..107 1055 100 Minus
3R 32079331 3R 15176161..15176295 520..386 675 100 Minus
3R 32079331 3R 15179038..15179129 108..17 460 100 Minus
3R 32079331 3R 15176362..15176437 389..314 365 98.7 Minus
Blast to na_te.dros performed on 2014-11-28 00:22:56 has no hits.

BO15816.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:13:47 Download gff for BO15816.complete
Subject Subject Range Query Range Percent Splice Strand
Mf-RC 1..507 17..524 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:32:34 Download gff for BO15816.complete
Subject Subject Range Query Range Percent Splice Strand
Mf-RC 105..621 7..524 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:51:07 Download gff for BO15816.complete
Subject Subject Range Query Range Percent Splice Strand
Mf-RC 120..618 22..522 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:13:48 Download gff for BO15816.complete
Subject Subject Range Query Range Percent Splice Strand
Mf-RC 105..621 7..524 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:19:29 Download gff for BO15816.complete
Subject Subject Range Query Range Percent Splice Strand
Mf-RC 120..618 22..522 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:19:29 Download gff for BO15816.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15176159..15176293 388..522 98 <- Minus
3R 15176364..15176433 318..387 100 <- Minus
3R 15178280..15178489 108..317 100 <- Minus
3R 15179039..15179124 22..107 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:51:07 Download gff for BO15816.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11001881..11002015 388..522 98 <- Minus
arm_3R 11002086..11002155 318..387 100 <- Minus
arm_3R 11004002..11004211 108..317 100 <- Minus
arm_3R 11004761..11004846 22..107 100   Minus

BO15816.pep Sequence

Translation from 16 to 538

> BO15816.pep
MFKNHLEMIGRNESPSKKAKFWQSYIRSLKGSEDIRAHEAPRASRPYSSY
LDSPSYRSIYDEPATANERVQSSGYRYLPVSRDTYGYSPRAIYDHHYSRT
IPANYDAEKAWNDHLKRMQEIERRYPSRYGLYLRDKPLTPNSLVPLEYEP
EDKLLAELNKGKDIKDIFASFLDH

BO15816.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:16:34
Subject Length Description Subject Range Query Range Score Percent Strand
Mf-PQ 168 CG6803-PQ 1..168 1..168 898 100 Plus
Mf-PC 168 CG6803-PC 1..168 1..168 898 100 Plus
Mf-PI 230 CG6803-PI 1..162 1..162 858 98.8 Plus
Mf-PH 236 CG6803-PH 1..162 1..162 858 98.8 Plus
Mf-PE 166 CG6803-PE 1..160 1..160 856 100 Plus