Clone Sequence Records
BO15817.complete Sequence
2491 bp assembled on 2010-04-09
GenBank Submission: KX799513
> BO15817.complete
GAAGTTATCAGTCGACATGACGAAGAGCAATGGCGATGTGGAGGCGGCAG
CCCAGGTGCAATCTCTGGGCGGAAAGCCCAGCAACGGACATGGCCAGCTG
AATGGGAATGGCTATCATCAGAACGGCGGACGCAGGGATTCCAGTCAAGC
CTTCACACCACTGCTGTCGCAGCACAATAATGGCACCACCAATGGCGAGG
TGACCACTCCGCCTCCGAGTACAGTGCTCTACGAGAGCACCCCGAGCAAT
AATAACGAGTGGAAGGCCCCGGAGGATCTGGGACACCTGAAGAATGGCCT
GGGCAACATACTGAGCAGTAATAATAATGGCACCGGCAATGGGCACAGTC
TGAGCGAAAAGTATGCCCATGAACAGGCTCCCCTGACCGGAGGTTACAAG
TTGCCACCTCGCTCCAGTGAGTCCGAGGAATCCGATTTCGATTCCGACCT
CAATGGCGGCTCCTCCGCGGAATCCAGCTCCAGTTGCGGCCTTTTCGGCT
GTCGGCCCAGGTGGGCCAGAAGATTCGCGTCCACGCACGTCTTCATGGTG
GTCTTCCTGCTGGCCTACATCCTGCAGGGCATGTACATGACCTACTTCGT
CTCTGTGATCACCACCATTGAGAAGCTATTCCAGATCAAGTCGAAGACCA
CGGGAATTCTGCTGAGCGCCAGTGAGATGGGTCAGATATGCACGGCCATG
TTGCTGACCTACTTCGCCGGCAGAGGACATCGTCCGAGATGGATTGCCTG
CGGCATGGTCCTGTTCTCAATCGCCGCCTTCTCCTGCGCCCTGCCGCATT
TCATCTTCGGCGAGCAGCTGATGCACTCCAGTGTAATTCTGCAGCAGACG
CAGGTCTCCCCCCCCAATAATTCCTTCTCATCACACTGGCTGAATGCCAG
CAGTGAACAGGTTAATCCCAATTTGTGCATTTTGGGTGGCAACCAAACCC
ATTCGGGCAGCGAGTGCAACGAGGAGCGCCAGCTGGAACAGGCCTCCCAC
TCTAAGATCACCGTCATCGTGCTGTGCATCTTCTTTGGCAGCCTGCTCAG
CTCGGGCATTGGCCAGACCGCCGTGGCCACACTGGGCATACCCTACATCG
ATGACAATGTAGGCAGCAAGCAGTCGCCCATGTACATGGCCGTCACCATT
GGCATGAGGATCCTGGGACCGGCATCCGGTTTCATTTTTGGCAGCTTCTG
CACTCGCTGGTATGTCAACTTCTCGAATCCCGGCTTCGACGCCACGGATC
CGCGCTGGATTGGCGCCTGGTGGCTGGGGCCTGTGGCCATTGGCAGCCTC
ATGCTGCTGGCCTCCATCGCCATGTTCTCGTTTCCCAAGCAGTTGAGAGG
CAAGCAGAAGCCGCCGGGGCAGACAGCAACTCCAGCAGCTCCAGTTGAGC
CGGAGGAGAAGCCCAAGCTAAAAGATTTTCCCAAGACAGTCCGTCGCCAG
CTGAGCAACGACATCCTGATGTTCCGCACCGCCTCGTGCGTGTTCCACCT
GCTGCCCATCGCCGGTCTCTATACGTTCCTGCCCAAGTATCTGGAGACGC
AGTTCCGGCTGGCCACCTATGATGCCAACATGATCGCCGCCTTCTGTGGC
ATCCTGGTCATGGGCATAGGTATTGTCATTTCCGGGCTCTTCATCCTGAA
GCGAAAGCCCACTGCCAGGGGCGTGGCCGCCTGGATCGCCTTTACAGCCC
TCGTCTACTCGGCGGGCATGATCATCCTGATGTTCATCGGCTGCAGCATG
AACGACTTTGCCGGCTACAAGCCAAGCGATGGCAACAGTCCCGCCTTGAT
CGAGCCCACGTGCAGTGCCGCTCTCAACTGTACCTGTGATAAGGAGAACT
TCGCGCCCATCTGCGCCGACGGCAAAATGTACATCTCGGCCTGCCACGCC
GGATGCAGCAGCTCCTCACTGCGGCCCAGCGACAATCGCACACTCTACTC
CGATTGTGCTTGCATTCCAGATGCTCCGGAGGCGGTCAACGGTTACTGTG
ATAATAACTGCAAGAACTTCATCTACTTTATACTGATCTTTGCCATTTGC
GTATTTATGCATTCCACCTCCGAGGTGGGCAGCATGCTGCTCGTCATGCG
CTGCACACACCCCAAAGATAAGGCCATGGCCATGGGTGTGATACAGTCGG
CCATCGGCCTGTTCGGCAACGTTCCCTGTCCCATCATCTACGGCGCAGTG
GTGGACTCCGCCTGCCTCATCTGGAAGTCGGTGTGCGGCAAGCACGGCGC
CTGTTCACTCTACGATGCGGACACTTTCCGGCAATATTTCCTAGGAATCA
CGGCTGGCATTATGTTCCTGGCATTCCTGATGGATCTGGTGGTGTGGCGC
AAGGCGCATCGCATTGACATCGCGCCCGAGGATCCGCAGGAGGGCGGGCC
CGCTTCCAACGGAAGGACCTTGGAGGTGTCCGAGTCCAAGCAGCCCATCA
CCCCGGCGCCGGACACGACGGTCGCAAGCTTTCTAGACCAT
BO15817.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:44:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Oatp74D-RE | 2460 | CG7571-PE | 1..2457 | 17..2473 | 12285 | 100 | Plus |
| Oatp74D-RD | 2460 | CG7571-PD | 1..2457 | 17..2473 | 12285 | 100 | Plus |
| Oatp74D-RC | 2460 | CG7571-PC | 1..2457 | 17..2473 | 12285 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:44:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Oatp74D-RE | 4063 | CG7571-RE | 1006..3462 | 17..2473 | 12285 | 100 | Plus |
| Oatp74D-RD | 3658 | CG7571-RD | 601..3057 | 17..2473 | 12285 | 100 | Plus |
| Oatp74D-RC | 3715 | CG7571-RC | 658..3114 | 17..2473 | 12285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:43:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17507897..17509304 | 17..1424 | 7040 | 100 | Plus |
| 3L | 28110227 | 3L | 17509444..17509809 | 1423..1788 | 1830 | 100 | Plus |
| 3L | 28110227 | 3L | 17510142..17510328 | 1787..1973 | 935 | 100 | Plus |
| 3L | 28110227 | 3L | 17510907..17511092 | 2288..2473 | 915 | 99.5 | Plus |
| 3L | 28110227 | 3L | 17510597..17510776 | 2116..2295 | 900 | 100 | Plus |
| 3L | 28110227 | 3L | 17510390..17510538 | 1973..2121 | 730 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:43:59 has no hits.
BO15817.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:29:21 Download gff for
BO15817.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp74D-RA | 626..3082 | 17..2475 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:09 Download gff for
BO15817.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp74D-RA | 647..3103 | 17..2475 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:23:52 Download gff for
BO15817.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp74D-RC | 658..3114 | 17..2475 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:23:52 Download gff for
BO15817.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17510914..17511092 | 2295..2475 | 98 | | Plus |
| 3L | 17507897..17509304 | 17..1424 | 100 | -> | Plus |
| 3L | 17509446..17509809 | 1425..1788 | 100 | -> | Plus |
| 3L | 17510144..17510328 | 1789..1973 | 100 | -> | Plus |
| 3L | 17510391..17510534 | 1974..2117 | 100 | -> | Plus |
| 3L | 17510599..17510775 | 2118..2294 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:09 Download gff for
BO15817.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17504014..17504192 | 2295..2475 | 98 | | Plus |
| arm_3L | 17500997..17502404 | 17..1424 | 100 | -> | Plus |
| arm_3L | 17502546..17502909 | 1425..1788 | 100 | -> | Plus |
| arm_3L | 17503244..17503428 | 1789..1973 | 100 | -> | Plus |
| arm_3L | 17503491..17503634 | 1974..2117 | 100 | -> | Plus |
| arm_3L | 17503699..17503875 | 2118..2294 | 100 | -> | Plus |
BO15817.5prime Sequence
1233 bp (958 high quality bases) assembled on 2010-02-21
> BO15817.5prime
ATGACGAAGAGCAATGGCGATGTGGAGGCGGCAGCCCAGGTGCAATCTCT
GGGCGGAAAGCCCAGCAACGGACATGGCCAGCTGAATGGGAATGGCTATC
ATCAGAACGGCGGACGCAGGGATTCCAGTCAAGCCTTCACACCACTGCTG
TCGCAGCACAATAATGGCACCACCAATGGCGAGGTGACCACTCCGCCTCC
GAGTACAGTGCTCTACGAGAGCACCCCGAGCAATAATAACGAGTGGAAGG
CCCCGGAGGATCTGGGACACCTGAAGAATGGCCTGGGCAACATACTGAGC
AGTAATAATAATGGCACCGGCAATGGGCACAGTCTGAGCGAAAAGTATGC
CCATGAACAGGCTCCCCTGACCGGAGGTTACAAGTTGCCACCTCGCTCCA
GTGAGTCCGAGGAATCCGATTTCGATTCCGACCTCAATGGCGGCTCCTCC
GCGGAATCCAGCTCCAGTTGCGGCCTTTTCGGCTGTCGGCCCAGGTGGGC
CAGAAGATTCGCGTCCACGCACGTCTTCATGGTGGTCTTCCTGCTGGCCT
ACATCCTGCAGGGCATGTACATGACCTACTTCGTCTCTGTGATCACCACC
ATTGAGAAGCTATTCCAGATCAAGTCGAAGACCACGGGAATTCTGCTGAG
CGCCAGTGAGATGGGTCAGATATGCACGGCCATGTTGCTGACCTACTTCG
CCGGCAGAGGACATCGTCCGAGATGGATTGCCTGCGGCATGGTCCTGTTC
TCAATCGCCGCCTTCTCCTGCGCCCTGCCGCATTTCATCTTCGGCGAGCA
GCTGATGCACTCCAGTGTAATTCTGCAGCAGACGCAGGTCTCCCCCCCAA
TAATTCTTCTCATCACACTGGCTGATTGCCAGCAGTGAACAGGTTAATCC
CCATTTGTGCATTTTGGGTTGCAACCAAAACCCATCCGGGCACCGAGTGC
AACGAAGAAGCGCCGGCTGGAAACCAGCCTCCCACTCCTAAAATCCCCCG
CCTCCGGGCTGGGGCTTCTTTCTTTGGGCACCCGGCTCCACTTCGGGGCA
TTGGGCCACAACCCCCCGGGGGCCCCACCGGGGGCAACTCCCTTAATCTC
AAAAAACAAGGGGAAGGGACCCAAAGCCCACCCCCCCCCTGGTGTCATGG
GCCCGTCCCCCCACTTGGGGTAGAGGGGGAATTCCGGGGGGGCCCGGGGC
CTCCCCGCGTGTTTTTTTTTTTTTTTTGTGGGG
BO15817.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:42:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Oatp74D-RE | 4063 | CG7571-RE | 1006..1991 | 1..987 | 4685 | 98.6 | Plus |
| Oatp74D-RD | 3658 | CG7571-RD | 601..1586 | 1..987 | 4685 | 98.6 | Plus |
| Oatp74D-RC | 3715 | CG7571-RC | 658..1643 | 1..987 | 4685 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 12:42:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17507897..17508868 | 1..972 | 4565 | 98.9 | Plus |
Blast to na_te.dros performed on 2015-02-12 12:42:03 has no hits.
BO15817.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-21 04:04:17 Download gff for
BO15817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp74D-RA | 626..1600 | 1..977 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 08:40:03 Download gff for
BO15817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp74D-RA | 647..1621 | 1..977 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 14:26:30 Download gff for
BO15817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp74D-RC | 658..1632 | 1..977 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 14:26:30 Download gff for
BO15817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17507897..17508895 | 1..998 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 08:40:03 Download gff for
BO15817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17500997..17501995 | 1..998 | 98 | <- | Plus |
BO15817.pep Sequence
Translation from 16 to 2491
> BO15817.pep
MTKSNGDVEAAAQVQSLGGKPSNGHGQLNGNGYHQNGGRRDSSQAFTPLL
SQHNNGTTNGEVTTPPPSTVLYESTPSNNNEWKAPEDLGHLKNGLGNILS
SNNNGTGNGHSLSEKYAHEQAPLTGGYKLPPRSSESEESDFDSDLNGGSS
AESSSSCGLFGCRPRWARRFASTHVFMVVFLLAYILQGMYMTYFVSVITT
IEKLFQIKSKTTGILLSASEMGQICTAMLLTYFAGRGHRPRWIACGMVLF
SIAAFSCALPHFIFGEQLMHSSVILQQTQVSPPNNSFSSHWLNASSEQVN
PNLCILGGNQTHSGSECNEERQLEQASHSKITVIVLCIFFGSLLSSGIGQ
TAVATLGIPYIDDNVGSKQSPMYMAVTIGMRILGPASGFIFGSFCTRWYV
NFSNPGFDATDPRWIGAWWLGPVAIGSLMLLASIAMFSFPKQLRGKQKPP
GQTATPAAPVEPEEKPKLKDFPKTVRRQLSNDILMFRTASCVFHLLPIAG
LYTFLPKYLETQFRLATYDANMIAAFCGILVMGIGIVISGLFILKRKPTA
RGVAAWIAFTALVYSAGMIILMFIGCSMNDFAGYKPSDGNSPALIEPTCS
AALNCTCDKENFAPICADGKMYISACHAGCSSSSLRPSDNRTLYSDCACI
PDAPEAVNGYCDNNCKNFIYFILIFAICVFMHSTSEVGSMLLVMRCTHPK
DKAMAMGVIQSAIGLFGNVPCPIIYGAVVDSACLIWKSVCGKHGACSLYD
ADTFRQYFLGITAGIMFLAFLMDLVVWRKAHRIDIAPEDPQEGGPASNGR
TLEVSESKQPITPAPDTTVASFLDH
BO15817.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:00:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Oatp74D-PE | 819 | CG7571-PE | 1..819 | 1..819 | 4349 | 100 | Plus |
| Oatp74D-PD | 819 | CG7571-PD | 1..819 | 1..819 | 4349 | 100 | Plus |
| Oatp74D-PC | 819 | CG7571-PC | 1..819 | 1..819 | 4349 | 100 | Plus |
| Oatp74D-PA | 819 | CG7571-PA | 1..819 | 1..819 | 4349 | 100 | Plus |
| Oatp58Da-PA | 684 | CG30277-PA | 26..674 | 134..804 | 861 | 31.8 | Plus |
