Clone Sequence Records
BO15823.3prime Sequence
473 bp (473 high quality bases) assembled on 2006-06-02
> BO15823.3prime
ATGGTCTAGAAAGCTTGCGCCGAACATGGAATCCAAAAGAGTGTTCTCCC
GCTCCCGTCGGTTAGCTTCATCCTGCCTAAACCTGCGCAACTCCTCGTAA
ACAGGATCATCAGTTTCCAGTTCATAGCGACACAGAGGACAGGAATTCGT
CTTCTTCAGCCAGAGCAGGATGCACTCCTCGTGGAACTCGTGCTTGCATG
GAAGGATCCTGTACTTCTGGCCCTCTTCAGCTGGCTCCTTGCACACAGAG
CACTCCAAATCGCCGCCCTCGTCCGATTTGACGATTTCATGAACTGGTAG
CTCCAGAATGGCTCGCTTGGAGGCCTCTGGCACCTCGATCTCCATATCGA
TGCCATTCATGATGGCCAAAACCTGAAGGCGCTTTAGATTTCTGGCCAAA
TCGTTTGCGCCCAGTGGTCCAGTGGGTTCATGACCCAGTTCCTCGAAGTA
GTCGGACATGTCGACTGATAACT
BO15823.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:41:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7694-PA | 444 | CG7694-RA | 1..441 | 459..19 | 2205 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:37:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7694-RC | 631 | CG7694-RC | 116..557 | 460..19 | 2210 | 100 | Minus |
CG7694-RB | 640 | CG7694-RB | 125..566 | 460..19 | 2210 | 100 | Minus |
CG7694-RA | 970 | CG7694-RA | 455..896 | 460..19 | 2210 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:37:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18590118..18590427 | 460..151 | 1550 | 100 | Minus |
3R | 32079331 | 3R | 18590519..18590652 | 152..19 | 670 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:37:52 has no hits.
BO15823.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:54:48 Download gff for
BO15823.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-PA | 1..444 | 15..459 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:59:56 Download gff for
BO15823.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-PA | 1..444 | 15..459 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:51:43 Download gff for
BO15823.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-RA | 451..898 | 11..460 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:51:43 Download gff for
BO15823.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-RA | 455..902 | 11..460 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:51:43 Download gff for
BO15823.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18590109..18590427 | 151..473 | 98 | -> | Minus |
3R | 18590521..18590658 | 11..150 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:51:43 Download gff for
BO15823.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14415831..14416149 | 151..473 | 98 | -> | Minus |
arm_3R | 14416243..14416380 | 11..150 | 97 | | Minus |
BO15823.5prime Sequence
473 bp (473 high quality bases) assembled on 2006-05-30
> BO15823.5prime
GAAGTTATCAGTCGACATGTCCGACTACTTCGAGGAACTGGGTCATGAAC
CCACTGGACCACTGGGCGCAAACGATTTGGCCAGAAATCTAAAGCGCCTT
CAGGTTTTGGCCATCATGAATGGCATCGATATGGAGATCGAGGTGCCAGA
GGCCTCCAAGCGAGCCATTCTGGAGCTACCAGTTCATGAAATCGTCAAAT
CGGACGAGGGCGGCGATTTGGAGTGCTCTGTGTGCAAGGAGCCAGCTGAA
GAGGGCCAGAAGTACAGGATCCTTCCATGCAAGCACGAGTTCCACGAGGA
GTGCATCCTGCTCTGGCTGAAGAAGACGAATTCCTGTCCTCTGTGTCGCT
ATGAACTGGAAACTGATGATCCTGTTTACGAGGAGTTGCGCAGGTTTAGG
CAGGATGAAGCTAACCGACGGGAGCGGGAGAACACTCTTTTGGATTCCAT
GTTCGGCGCAAGCTTTCTAGACC
BO15823.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:41:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7694-PA | 444 | CG7694-RA | 1..441 | 17..457 | 2205 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 22:37:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7694-RC | 631 | CG7694-RC | 116..557 | 16..457 | 2210 | 100 | Plus |
CG7694-RB | 640 | CG7694-RB | 125..566 | 16..457 | 2210 | 100 | Plus |
CG7694-RA | 970 | CG7694-RA | 455..896 | 16..457 | 2210 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 22:37:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18590118..18590427 | 16..325 | 1550 | 100 | Plus |
3R | 32079331 | 3R | 18590519..18590652 | 324..457 | 670 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-09 22:37:16 has no hits.
BO15823.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:54:49 Download gff for
BO15823.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-PA | 1..444 | 17..461 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:59:58 Download gff for
BO15823.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-PA | 1..444 | 17..461 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 08:21:57 Download gff for
BO15823.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-RA | 451..898 | 16..465 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 00:46:42 Download gff for
BO15823.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-RA | 455..902 | 16..465 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 00:46:42 Download gff for
BO15823.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18590109..18590427 | 2..325 | 98 | -> | Plus |
3R | 18590521..18590658 | 326..465 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 08:21:57 Download gff for
BO15823.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14415831..14416149 | 2..325 | 98 | -> | Plus |
arm_3R | 14416243..14416380 | 326..465 | 97 | | Plus |
BO15823.complete Sequence
475 bp (475 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633595
> BO15823.complete
GAAGTTATCAGTCGACATGTCCGACTACTTCGAGGAACTGGGTCATGAAC
CCACTGGACCACTGGGCGCAAACGATTTGGCCAGAAATCTAAAGCGCCTT
CAGGTTTTGGCCATCATGAATGGCATCGATATGGAGATCGAGGTGCCAGA
GGCCTCCAAGCGAGCCATTCTGGAGCTACCAGTTCATGAAATCGTCAAAT
CGGACGAGGGCGGCGATTTGGAGTGCTCTGTGTGCAAGGAGCCAGCTGAA
GAGGGCCAGAAGTACAGGATCCTTCCATGCAAGCACGAGTTCCACGAGGA
GTGCATCCTGCTCTGGCTGAAGAAGACGAATTCCTGTCCTCTGTGTCGCT
ATGAACTGGAAACTGATGATCCTGTTTACGAGGAGTTGCGCAGGTTTAGG
CAGGATGAAGCTAACCGACGGGAGCGGGAGAACACTCTTTTGGATTCCAT
GTTCGGCGCAAGCTTTCTAGACCAT
BO15823.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:09:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7694-RC | 444 | CG7694-PC | 1..441 | 17..457 | 2205 | 100 | Plus |
CG7694-RB | 444 | CG7694-PB | 1..441 | 17..457 | 2205 | 100 | Plus |
CG7694-RA | 444 | CG7694-PA | 1..441 | 17..457 | 2205 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:09:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7694-RC | 631 | CG7694-RC | 116..557 | 16..457 | 2210 | 100 | Plus |
CG7694-RB | 640 | CG7694-RB | 125..566 | 16..457 | 2210 | 100 | Plus |
CG7694-RA | 970 | CG7694-RA | 455..896 | 16..457 | 2210 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:09:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18590118..18590427 | 16..325 | 1550 | 100 | Plus |
3R | 32079331 | 3R | 18590519..18590652 | 324..457 | 670 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:09:26 has no hits.
BO15823.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:12:29 Download gff for
BO15823.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-RB | 1..444 | 17..461 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:04:37 Download gff for
BO15823.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-RA | 451..898 | 16..465 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:03:59 Download gff for
BO15823.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-RA | 452..892 | 17..459 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:12:29 Download gff for
BO15823.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-RA | 451..898 | 16..465 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:16:02 Download gff for
BO15823.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-RA | 456..896 | 17..459 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:16:02 Download gff for
BO15823.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18590119..18590427 | 17..325 | 100 | -> | Plus |
3R | 18590521..18590652 | 326..459 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:03:59 Download gff for
BO15823.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14415841..14416149 | 17..325 | 100 | -> | Plus |
arm_3R | 14416243..14416374 | 326..459 | 98 | | Plus |
BO15823.pep Sequence
Translation from 16 to 475
> BO15823.pep
MSDYFEELGHEPTGPLGANDLARNLKRLQVLAIMNGIDMEIEVPEASKRA
ILELPVHEIVKSDEGGDLECSVCKEPAEEGQKYRILPCKHEFHEECILLW
LKKTNSCPLCRYELETDDPVYEELRRFRQDEANRRERENTLLDSMFGASF
LDH
BO15823.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:54:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7694-PC | 147 | CG7694-PC | 1..147 | 1..147 | 784 | 100 | Plus |
CG7694-PB | 147 | CG7694-PB | 1..147 | 1..147 | 784 | 100 | Plus |
CG7694-PA | 147 | CG7694-PA | 1..147 | 1..147 | 784 | 100 | Plus |
gol-PE | 461 | CG2679-PE | 278..347 | 47..114 | 144 | 40.8 | Plus |
gol-PC | 461 | CG2679-PC | 278..347 | 47..114 | 144 | 40.8 | Plus |