Clone Sequence Records
BO15830.5prime Sequence
386 bp (386 high quality bases) assembled on 2006-05-30
> BO15830.5prime
GAAGTTATCAGTCGACATGTTGACCACGATGAGAGGCAGCGCAAAGAAAC
TTCCCATCTGGCCACTGACCCATTTTCGCAGATTCCCGACATTGATTAAA
TCCCACGCAAGTTCCGAAGAAAAATTTGAGCAAAAAGCTGAGGAAGTGGA
CGGCGTATCCAATATGAAGCTACCCTACTTTATAAGCCCAAGGTGTGTTC
AAAATCAGGATCAACTGGTTGATGGGCAGACGAAAATGTTCACCTACAAC
TATCATCCGTTTTCCATTTACGATTTAAATGAAGCTACTCTTCGCGCCAA
GCAAGCAGCAGATGAGTATTCAAAGAAAATTGATGAGTTGCAAAAGCGTA
AGATTGAATATGTAAACAAGGCAAGCTTTCTAGACC
BO15830.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:41:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16964-PA | 357 | CG16964-RA | 1..354 | 17..370 | 1770 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:04:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16964-RB | 793 | CG16964-RB | 100..453 | 17..370 | 1770 | 100 | Plus |
CG16964-RA | 589 | CG16964-RA | 76..429 | 17..370 | 1770 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:04:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11948110..11948463 | 17..370 | 1770 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 01:04:20 has no hits.
BO15830.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:54:55 Download gff for
BO15830.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16964-PA | 1..357 | 17..371 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:00:05 Download gff for
BO15830.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16964-PA | 1..357 | 17..371 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 08:43:56 Download gff for
BO15830.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16964-RA | 76..434 | 17..378 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:06:31 Download gff for
BO15830.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16964-RA | 76..434 | 17..378 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:06:31 Download gff for
BO15830.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11948103..11948468 | 10..378 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 08:43:56 Download gff for
BO15830.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11948103..11948468 | 10..378 | 97 | | Plus |
BO15830.3prime Sequence
386 bp (386 high quality bases) assembled on 2006-06-02
> BO15830.3prime
ATGGTCTAGAAAGCTTGCCTTGTTTACATATTCAATCTTACGCTTTTGCA
ACTCATCAATTTTCTTTGAATACTCATCTGCTGCTTGCTTGGCGCGAAGA
GTAGCTTCATTTAAATCGTAAATGGAAAACGGATGATAGTTGTAGGTGAA
CATTTTCGTCTGCCCATCAACCAGTTGATCCTGATTTTGAACACACCTTG
GGCTTATAAAGTAGGGTAGCTTCATATTGGATACGCCGTCCACTTCCTCA
GCTTTTTGCTCAAATTTTTCTTCGGAACTTGCGTGGGATTTAATCAATGT
CGGGAATCTGCGAAAATGGGTCAGTGGCCAGATGGGAAGTTTCTTTGCGC
TGCCTCTCATCGTGGTCAACATGTCGACTGATAACT
BO15830.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:41:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16964-PA | 357 | CG16964-RA | 1..354 | 372..19 | 1770 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:10:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16964-RB | 793 | CG16964-RB | 100..453 | 372..19 | 1770 | 100 | Minus |
CG16964-RA | 589 | CG16964-RA | 76..429 | 372..19 | 1770 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 18:10:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11948110..11948463 | 372..19 | 1770 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 18:10:16 has no hits.
BO15830.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:54:54 Download gff for
BO15830.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16964-PA | 1..357 | 18..372 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:00:04 Download gff for
BO15830.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16964-PA | 1..357 | 18..372 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 02:49:13 Download gff for
BO15830.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16964-RA | 76..434 | 11..372 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 20:19:42 Download gff for
BO15830.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16964-RA | 76..434 | 11..372 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 20:19:42 Download gff for
BO15830.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11948103..11948468 | 11..379 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 02:49:13 Download gff for
BO15830.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11948103..11948468 | 11..379 | 97 | | Minus |
BO15830.complete Sequence
388 bp (388 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633599
> BO15830.complete
GAAGTTATCAGTCGACATGTTGACCACGATGAGAGGCAGCGCAAAGAAAC
TTCCCATCTGGCCACTGACCCATTTTCGCAGATTCCCGACATTGATTAAA
TCCCACGCAAGTTCCGAAGAAAAATTTGAGCAAAAAGCTGAGGAAGTGGA
CGGCGTATCCAATATGAAGCTACCCTACTTTATAAGCCCAAGGTGTGTTC
AAAATCAGGATCAACTGGTTGATGGGCAGACGAAAATGTTCACCTACAAC
TATCATCCGTTTTCCATTTACGATTTAAATGAAGCTACTCTTCGCGCCAA
GCAAGCAGCAGATGAGTATTCAAAGAAAATTGATGAGTTGCAAAAGCGTA
AGATTGAATATGTAAACAAGGCAAGCTTTCTAGACCAT
BO15830.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:37:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16964-RB | 357 | CG16964-PB | 1..354 | 17..370 | 1770 | 100 | Plus |
CG16964-RA | 357 | CG16964-PA | 1..354 | 17..370 | 1770 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:37:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16964-RB | 793 | CG16964-RB | 100..453 | 17..370 | 1770 | 100 | Plus |
CG16964-RA | 589 | CG16964-RA | 76..429 | 17..370 | 1770 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:37:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11948110..11948463 | 17..370 | 1770 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:37:01 has no hits.
BO15830.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:07 Download gff for
BO15830.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16964-RA | 1..357 | 17..371 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:07:49 Download gff for
BO15830.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16964-RA | 76..434 | 17..378 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:57:26 Download gff for
BO15830.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16964-RA | 81..429 | 22..372 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:07 Download gff for
BO15830.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16964-RA | 76..434 | 17..378 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:22:41 Download gff for
BO15830.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16964-RA | 81..429 | 22..372 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:22:41 Download gff for
BO15830.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11948115..11948463 | 22..372 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:57:26 Download gff for
BO15830.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11948115..11948463 | 22..372 | 99 | | Plus |
BO15830.pep Sequence
Translation from 16 to 388
> BO15830.pep
MLTTMRGSAKKLPIWPLTHFRRFPTLIKSHASSEEKFEQKAEEVDGVSNM
KLPYFISPRCVQNQDQLVDGQTKMFTYNYHPFSIYDLNEATLRAKQAADE
YSKKIDELQKRKIEYVNKASFLDH
BO15830.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:01:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16964-PB | 118 | CG16964-PB | 1..118 | 1..118 | 618 | 100 | Plus |
CG16964-PA | 118 | CG16964-PA | 1..118 | 1..118 | 618 | 100 | Plus |