BO15843.complete Sequence
1474 bp (1474 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633603
> BO15843.complete
GAAGTTATCAGTCGACATGGCAGAGACCAATAAAGTCCGTCTCCTCAGGG
GTTATCTCTACGCCGGGGAGCTGCGTCAATTAACGGCGGGCGGTAGTAAG
ACCGCGTGCCAGGAGCTATCACTTGAGCCCTTCTGGCAGCCGCAGCCACT
GCTGAGCAAGTTAACCGATGGGGGATCCTTCGAGCTGCAGGAGCAATTCG
CCATCATCAATGATGAGCGCTTCCTGCAGAGCGTCGAGCGGCAGCAGCTG
GTCATGGAGCTGCGTCCATTGGGAGGAGTCGTACGACTTCCGCTGCACCA
GTTCTTCATCGCCTACAGAGACTCCAGCATCACAAATCACCTGTGCAAGG
GAAAGCTACCAGTGATCTCCATCGATGGCTGGGCACCAATTGTCAGTGCT
GAGAACAAGACGCCTCTGGGCGAGCTCAAGGTGCTTCTGGCCATTGGAAG
TGAGTCGCAGATTGCTCAACTGAAGCAGCTGCGTGGCTTCGACCATGACA
ACAACCAAGTACCGGCTCCAAGCCGGACCACAGACTTACTCGACATGCTT
CAAAATGCCATCGCAGCTCCGACGCCGAATATCGCAGGTCCAGTAATGCC
GCCGCCACCGGCTCCTCCAGCGCCCAGTACCTTTAGCTTCCAGTTGCGCA
TCGTGGGAGCTGCTGGACTGCCCCTAAATCCCGGCTATGGGAAATCGAAG
AAGCAAGTAAAACGTCAGTCGGCAGCCAAGCGCTTCCCGCCCAACGAACC
TCCCAACACCTATGTGACCTTCCAGGCCATCAGTTGCAATAGTCAGACCT
ATAAGTCGCACGAAGGATTGGTGTACGCCACACCAATTGTACCCAAATCG
ACGAAGCCCCAGTGGCTTAGCAAGTTCCGCGTGGACGTGAGTCGCGATTA
TCGCAGCAATCCCCAGAAGCTTTTCATTCTGAAGCTTTGGAAAAAGGCGG
TTGTTAGCCCAAATGGCATCACAGAGCCGTCTCCCCATGAAGATGCCATA
ATAGGATTCGCTGCACTTAATCTTAACCAAAAACAAGCGGGCGGAGGCTT
TCCCAGCGGATGGCATAACATAGTAGACTTCAATGGACGTGTGACTGGGG
GAATCGAGGCGCACGTGGAGCCCATATCGCCCAGTGTAGATACCGTAATC
GATCAGTTCGAGAAGTCCATGGAACTGGGTCACTTGCAGTTGGGCCAGGC
CATCAAGCGCAAATACACGGAGCTGGAGGAGATCTCGCAGAGATTGCGAT
CTCGGCTGGTGGATGTGACGGGGGAAACGCTGAAGTTCCCGGAATTCGAT
GTCGACTCCGCATTGGACAGTTGGCAACAGGAGGGAGATGACGATGATTT
AGCGGAGGACTTTGAACGCTCCCTACGCACTCCCACGCCCCCTGGCTCGC
CAACGCCCTCCACCAGCACCGCCGCACAAAATCTCAGAAACTCGAACGGT
CAGGAAGCAAGCTTTCTAGACCAT
BO15843.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:54:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32425-RA | 2280 | CG32425-PA | 837..2277 | 16..1456 | 7205 | 100 | Plus |
| CG32425-RE | 2280 | CG32425-PE | 837..2277 | 16..1456 | 7205 | 100 | Plus |
| CG32425-RC | 1443 | CG32425-PC | 1..1440 | 17..1456 | 7200 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:54:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32425-RA | 2813 | CG32425-RA | 949..2389 | 16..1456 | 7205 | 100 | Plus |
| CG32425-RE | 2827 | CG32425-RE | 963..2403 | 16..1456 | 7205 | 100 | Plus |
| CG32425-RC | 2077 | CG32425-RC | 213..1653 | 16..1456 | 7205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:54:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20512519..20513075 | 354..910 | 2785 | 100 | Plus |
| 3L | 28110227 | 3L | 20513138..20513683 | 911..1456 | 2730 | 100 | Plus |
| 3L | 28110227 | 3L | 20512046..20512385 | 16..355 | 1700 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:54:54 has no hits.
BO15843.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:01 Download gff for
BO15843.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32425-RA | 829..2280 | 7..1457 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:07:41 Download gff for
BO15843.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32425-RA | 941..2393 | 7..1462 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:46:59 Download gff for
BO15843.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32425-RC | 214..1653 | 17..1458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:01 Download gff for
BO15843.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32425-RA | 941..2393 | 7..1462 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:55:41 Download gff for
BO15843.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32425-RC | 214..1653 | 17..1458 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:55:41 Download gff for
BO15843.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20512047..20512385 | 17..355 | 100 | -> | Plus |
| 3L | 20512521..20513075 | 356..910 | 100 | -> | Plus |
| 3L | 20513138..20513683 | 911..1458 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:46:59 Download gff for
BO15843.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20505147..20505485 | 17..355 | 100 | -> | Plus |
| arm_3L | 20505621..20506175 | 356..910 | 100 | -> | Plus |
| arm_3L | 20506238..20506783 | 911..1458 | 99 | | Plus |
BO15843.pep Sequence
Translation from 16 to 1474
> BO15843.pep
MAETNKVRLLRGYLYAGELRQLTAGGSKTACQELSLEPFWQPQPLLSKLT
DGGSFELQEQFAIINDERFLQSVERQQLVMELRPLGGVVRLPLHQFFIAY
RDSSITNHLCKGKLPVISIDGWAPIVSAENKTPLGELKVLLAIGSESQIA
QLKQLRGFDHDNNQVPAPSRTTDLLDMLQNAIAAPTPNIAGPVMPPPPAP
PAPSTFSFQLRIVGAAGLPLNPGYGKSKKQVKRQSAAKRFPPNEPPNTYV
TFQAISCNSQTYKSHEGLVYATPIVPKSTKPQWLSKFRVDVSRDYRSNPQ
KLFILKLWKKAVVSPNGITEPSPHEDAIIGFAALNLNQKQAGGGFPSGWH
NIVDFNGRVTGGIEAHVEPISPSVDTVIDQFEKSMELGHLQLGQAIKRKY
TELEEISQRLRSRLVDVTGETLKFPEFDVDSALDSWQQEGDDDDLAEDFE
RSLRTPTPPGSPTPSTSTAAQNLRNSNGQEASFLDH
BO15843.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:02:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32425-PA | 759 | CG32425-PA | 280..759 | 1..480 | 2500 | 100 | Plus |
| CG32425-PE | 759 | CG32425-PE | 280..759 | 1..480 | 2500 | 100 | Plus |
| CG32425-PC | 480 | CG32425-PC | 1..480 | 1..480 | 2500 | 100 | Plus |
