Clone Sequence Records
BO15855.5prime Sequence
188 bp (188 high quality bases) assembled on 2006-05-30
> BO15855.5prime
GAAGTTATCAGTCGACATGGGGCAAGGAGCTAGACGAATATTGCGGGCGT
CCCGCTCGCAGATTTGCGGTAGTCTTCGAACGGGCGAAGGGTCCAGCACC
TCAGCAAGTTGTCGAAAAGGTACACATAATCATTTTTGTCCTGCAGGCAC
AAAAATTTGGAAATTCTTTTATGCAAGCTTTCTAGACC
BO15855.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:41:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32582-PA | 159 | CG32582-RA | 1..156 | 17..172 | 780 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:55:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rrp47-RB | 1285 | CG8928-RB | 1132..1189 | 112..55 | 230 | 93.1 | Minus |
Rrp47-RB | 1285 | CG8928-RB | 1044..1093 | 160..111 | 205 | 94 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:55:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15836295..15836450 | 17..172 | 780 | 100 | Plus |
X | 23542271 | X | 15946096..15946153 | 112..55 | 230 | 93.1 | Minus |
X | 23542271 | X | 15946008..15946057 | 160..111 | 205 | 94 | Minus |
Blast to na_te.dros performed on 2015-02-13 00:55:50 has no hits.
BO15855.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:55:08 Download gff for
BO15855.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32582-PA | 1..159 | 17..176 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:00:23 Download gff for
BO15855.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32582-PA | 1..159 | 17..176 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 08:43:21 Download gff for
BO15855.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32582-RA | 127..288 | 10..176 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2015-02-13 03:05:13 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:05:13 Download gff for
BO15855.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15836292..15836453 | 10..176 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 08:43:21 Download gff for
BO15855.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15730325..15730486 | 10..176 | 96 | | Plus |
BO15855.3prime Sequence
188 bp (188 high quality bases) assembled on 2006-06-02
> BO15855.3prime
ATGGTCTAGAAAGCTTGCATAAAAGAATTTCCAAATTTTTGTGCCTGCAG
GACAAAAATGATTATGTGTACCTTTTCGACAACTTGCTGAGGTGCTGGAC
CCTTCGCCCGTTCGAAGACTACCGCAAATCTGCGAGCGGGACGCCCGCAA
TATTCGTCTAGCTCCTTGCCCCATGTCGACTGATAACT
BO15855.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:41:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32582-PA | 159 | CG32582-RA | 1..156 | 174..19 | 780 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:05:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rrp47-RB | 1285 | CG8928-RB | 1132..1189 | 79..136 | 230 | 93.1 | Plus |
Rrp47-RB | 1285 | CG8928-RB | 1044..1093 | 31..80 | 205 | 94 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:05:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15836295..15836450 | 174..19 | 780 | 100 | Minus |
X | 23542271 | X | 15946096..15946153 | 79..136 | 230 | 93.1 | Plus |
X | 23542271 | X | 15946008..15946057 | 31..80 | 205 | 94 | Plus |
Blast to na_te.dros performed on 2015-02-10 15:05:50 has no hits.
BO15855.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:55:07 Download gff for
BO15855.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32582-PA | 1..159 | 15..174 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:00:21 Download gff for
BO15855.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32582-PA | 1..159 | 15..174 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:33:25 Download gff for
BO15855.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32582-RA | 127..288 | 15..181 | 96 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2015-02-10 17:49:43 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:49:43 Download gff for
BO15855.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15836292..15836453 | 15..181 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:33:25 Download gff for
BO15855.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15730325..15730486 | 15..181 | 96 | | Minus |
BO15855.complete Sequence
190 bp assembled on 2007-12-19
GenBank Submission: FJ633608
> BO15855.complete
GAAGTTATCAGTCGACATGGGGCAAGGAGCTAGACGAATATTGCGGGCGT
CCCGCTCGCAGATTTGCGGTAGTCTTCGAACGGGCGAAGGGTCCAGCACC
TCAGCAAGTTGTCGAAAAGGTACACATAATCATTTTTGTCCTGCAGGCAC
AAAAATTTGGAAATTCTTTTATGCAAGCTTTCTAGACCAT
BO15855.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-28 01:11:06 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:11:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rrp47-RB | 1285 | CG8928-RB | 1132..1189 | 112..55 | 230 | 93.1 | Minus |
Rrp47-RB | 1285 | CG8928-RB | 1044..1093 | 160..111 | 205 | 94 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:11:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15836295..15836450 | 17..172 | 780 | 100 | Plus |
X | 23542271 | X | 15946096..15946153 | 112..55 | 230 | 93.1 | Minus |
X | 23542271 | X | 15946008..15946057 | 160..111 | 205 | 94 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:11:05 has no hits.
BO15855.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:02:59 Download gff for
BO15855.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32582-RA | 1..159 | 17..176 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-28 15:30:27 Download gff for
BO15855.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32582-RA | 130..285 | 17..174 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:41:29 Download gff for
BO15855.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32582-RA | 130..285 | 17..174 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:03:00 Download gff for
BO15855.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32582-RA | 127..288 | 10..176 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 01:46:47 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:46:47 Download gff for
BO15855.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15836295..15836450 | 17..174 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:41:29 Download gff for
BO15855.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15730328..15730483 | 17..174 | 98 | | Plus |
BO15855.pep Sequence
Translation from 16 to 190
> BO15855.pep
MGQGARRILRASRSQICGSLRTGEGSSTSASCRKGTHNHFCPAGTKIWKF
FYASFLDH
Sequence BO15855.pep has no blast hits.