Clone Sequence Records
BO15857.3prime Sequence
566 bp (566 high quality bases) assembled on 2006-06-02
> BO15857.3prime
ATGGTCTAGAAAGCTTGCAAAATAGATGCCCAGAATGGTGAAGATGGACA
GGAGAATGGCAAACGGCAGCCAGGTCTTAATAAAACCCCCTATTCCGACG
TAGCGGCCGCAGACAAAGAGCCACATGCTGAGGATAATCATGTTCCATGC
GGTGCTGTCGTAGTAGCGCATGTAGATGAGTGCCGTTGCCACATGCGAGT
GGCAGTTGTCACAGAAGATATTGTGGATGCGGGTGCCGTAGAGCACAGAT
GCTTTGGAGACCGCCTCGTCCCAGGCGTAACTGCCGCCCACCATGTGCTT
GGGATGCAACCTTATGTACCGGGTGGGTCTTCCAAACGCCATGTTGTCCT
CTGATACGAAGTAGGGGCCGGCGAAGTCACGAATCACACCGGACGAAGTG
CAAATGCCCATATGTCCGATCATGGGCATCAGCCAGGTGAGAACCGGAAT
GGGAGTCCAAACGATGCAGTAGGGGAAGCGTTGGTCCTTTACGTTGATCG
GAGGCAGTCTATCCGGAACGCCATTGCCGGCTCCTCCTCCGGAACTGGCC
ATGTCGACTGATAACT
BO15857.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:41:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8372-PB | 591 | CG8372-RB | 55..588 | 552..19 | 2620 | 99.6 | Minus |
| CG8372-PA | 537 | CG8372-RA | 1..534 | 552..19 | 2620 | 99.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 12:46:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8372-RA | 790 | CG8372-RA | 174..707 | 552..19 | 2640 | 99.6 | Minus |
| CG8372-RB | 864 | CG8372-RB | 248..781 | 552..19 | 2640 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 12:46:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8212122..8212655 | 19..552 | 2640 | 99.6 | Plus |
Blast to na_te.dros performed on 2015-02-08 12:46:21 has no hits.
BO15857.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:55:11 Download gff for
BO15857.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8372-PB | 49..591 | 15..562 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:00:27 Download gff for
BO15857.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8372-PA | 1..537 | 15..552 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:46:13 Download gff for
BO15857.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8372-RB | 242..788 | 11..562 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:50:12 Download gff for
BO15857.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8372-RB | 242..788 | 11..562 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:50:12 Download gff for
BO15857.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8212115..8212661 | 11..562 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:46:13 Download gff for
BO15857.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8212115..8212661 | 11..562 | 98 | | Plus |
BO15857.5prime Sequence
566 bp (566 high quality bases) assembled on 2006-05-30
> BO15857.5prime
GAAGTTATCAGTCGACATGGCCAGTTCCGGAGGAGGAGCCGGCAATGGCG
TTCCGGATAGACTGCCTCCGATCAACGTAAAGGACCAACGCTTCCCCTAC
TGCATCGTTTGGACTCCCATTCCGGTTCTCACCTGGCTGATGCCCATGAT
CGGACATATGGGCATTTGCACTTCGTCCGGTGTGATTCGTGACTTCGCCG
GCCCCTACTTCGTATCAGAGGACAACATGGCGTTTGGAAGACCCACCCGG
TACATAAGGTTGCATCCCAAGCACATGGTGGGCGGCAGTTACGCCTGGGA
CGAGGCGGTCTCCAAAGCATCTGTGCTCTACGGCACCCGCATCCACAATA
TCTTCTGTGACAACTGCCACTCGCATGTGGCAACGGCACTCATCTACATG
CGCTACTACGACAGCACCGCATGGAACATGATTATCCTCAGCATGTGGCT
CTTTGTCTGCGGCCGCTACGTCGGAATAGGGGGTTTTATTAAGACCTGGC
TGCCGTTTGCCATTCTCCTGTCCATCTTCACCATTCTGGGCATCTATTTT
GCAAGCTTTCTAGACC
BO15857.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:41:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8372-PB | 591 | CG8372-RB | 55..588 | 17..550 | 2620 | 99.6 | Plus |
| CG8372-PA | 537 | CG8372-RA | 1..534 | 17..550 | 2620 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:36:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8372-RA | 790 | CG8372-RA | 174..707 | 17..550 | 2640 | 99.6 | Plus |
| CG8372-RB | 864 | CG8372-RB | 248..781 | 17..550 | 2640 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:36:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8212122..8212655 | 550..17 | 2640 | 99.6 | Minus |
Blast to na_te.dros performed on 2015-02-12 19:36:17 has no hits.
BO15857.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:55:12 Download gff for
BO15857.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8372-PB | 49..591 | 7..554 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:00:28 Download gff for
BO15857.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8372-PA | 1..537 | 17..554 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:30:25 Download gff for
BO15857.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8372-RB | 242..788 | 7..558 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:55:26 Download gff for
BO15857.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8372-RB | 242..788 | 7..558 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 23:55:26 Download gff for
BO15857.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8212115..8212661 | 7..558 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:30:25 Download gff for
BO15857.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8212115..8212661 | 7..558 | 98 | | Minus |
BO15857.complete Sequence
568 bp (568 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ638743
> BO15857.complete
GAAGTTATCAGTCGACATGGCCAGTTCCGGAGGAGGAGCCGGCAATGGCG
TTCCGGATAGACTGCCTCCGATCAACGTAAAGGACCAACGCTTCCCCTAC
TGCATCGTTTGGACTCCCATTCCGGTTCTCACCTGGCTGATGCCCATGAT
CGGACATATGGGCATTTGCACTTCGTCCGGTGTGATTCGTGACTTCGCCG
GCCCCTACTTCGTATCAGAGGACAACATGGCGTTTGGAAGACCCACCCGG
TACATAAGGTTGCATCCCAAGCACATGGTGGGCGGCAGTTACGCCTGGGA
CGAGGCGGTCTCCAAAGCATCTGTGCTCTACGGCACCCGCATCCACAATA
TCTTCTGTGACAACTGCCACTCGCATGTGGCAACGGCACTCATCTACATG
CGCTACTACGACAGCACCGCATGGAACATGATTATCCTCAGCATGTGGCT
CTTTGTCTGCGGCCGCTACGTCGGAATAGGGGGTTTTATTAAGACCTGGC
TGCCGTTTGCCATTCTCCTGTCCATCTTCACCATTCTGGGCATCTATTTT
GCAAGCTTTCTAGACCAT
BO15857.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:22:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8372-RA | 537 | CG8372-PA | 1..534 | 17..550 | 2640 | 99.6 | Plus |
| CG8372-RB | 591 | CG8372-PB | 55..588 | 17..550 | 2640 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:22:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8372-RA | 790 | CG8372-RA | 174..707 | 17..550 | 2640 | 99.6 | Plus |
| CG8372-RB | 864 | CG8372-RB | 248..781 | 17..550 | 2640 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:22:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8212122..8212655 | 550..17 | 2640 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:22:53 has no hits.
BO15857.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:52:04 Download gff for
BO15857.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8372-RA | 1..537 | 17..554 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:07:44 Download gff for
BO15857.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8372-RB | 221..767 | 7..558 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:38:24 Download gff for
BO15857.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8372-RB | 248..781 | 17..552 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:52:04 Download gff for
BO15857.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8372-RB | 221..767 | 7..558 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:20:20 Download gff for
BO15857.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8372-RB | 248..781 | 17..552 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:20:20 Download gff for
BO15857.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8212120..8212655 | 17..552 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:38:24 Download gff for
BO15857.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8212120..8212655 | 17..552 | 99 | | Minus |
BO15857.pep Sequence
Translation from 16 to 568
> BO15857.pep
MASSGGGAGNGVPDRLPPINVKDQRFPYCIVWTPIPVLTWLMPMIGHMGI
CTSSGVIRDFAGPYFVSEDNMAFGRPTRYIRLHPKHMVGGSYAWDEAVSK
ASVLYGTRIHNIFCDNCHSHVATALIYMRYYDSTAWNMIILSMWLFVCGR
YVGIGGFIKTWLPFAILLSIFTILGIYFASFLDH
BO15857.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:00:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8372-PA | 178 | CG8372-PA | 1..178 | 1..178 | 982 | 100 | Plus |
| CG8372-PB | 196 | CG8372-PB | 19..196 | 1..178 | 982 | 100 | Plus |
