Clone BO15867 Report

Search the DGRC for BO15867

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:158
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG16926-RA
Protein status:BO15867.pep: validated full length
Sequenced Size:415

Clone Sequence Records

BO15867.3prime Sequence

413 bp (413 high quality bases) assembled on 2006-06-02

> BO15867.3prime
ATGGTCTAGAAAGCTTGCCTTGGTGGGGGCGTACTCGTTCTTCTTCACAT
TGTGGGGGGAATAGCGATTGTACAATCCCCAGATGGAGTTCATCAGCTTG
TCGTTGTACTTGTTGGGCGAGTACTCGCGTTGGGTTAGGGCGTTCCCGTT
GTCAACGGAACCCTTATCTGCGGCAGCGGACCTCAGACGGGCGATGATCA
GCTCACGTTCGTTGAATTGCTCGCGAATCTTGCAGGCTGCGAATGCACCT
TGTGGAATGGCGGCCATCTTAACAACACTTAGGGAAATAACGCTCAGAAG
GGAGATGATGAAGTCAAAGTTTCGCAATGGGCTTGTATTCCAGCACTCGG
TGAAATGCTGATCGAGATTGATGATTTTTCCGCACTGCTGCAGCAGCATG
TCGACTGATAACT

BO15867.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:41:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG16926-PA 384 CG16926-RA 1..381 399..19 1905 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:10:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG16926-RB 979 CG16926-RB 367..747 399..19 1905 100 Minus
CG16926-RA 884 CG16926-RA 272..652 399..19 1905 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:10:50
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19500716..19500860 132..276 725 100 Plus
2R 25286936 2R 19500929..19501052 276..399 620 100 Plus
2R 25286936 2R 19500527..19500639 19..131 565 100 Plus
Blast to na_te.dros performed on 2015-02-10 16:10:54 has no hits.

BO15867.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:55:24 Download gff for BO15867.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16926-PA 1..384 16..399 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:00:44 Download gff for BO15867.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16926-PA 1..384 16..399 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 22:58:30 Download gff for BO15867.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 270..652 19..402 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:43:30 Download gff for BO15867.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 270..652 19..402 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:43:30 Download gff for BO15867.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 19500527..19500639 19..131 100 <- Plus
2R 19500716..19500859 132..275 100 <- Plus
2R 19500929..19501054 276..402 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 22:58:30 Download gff for BO15867.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15388032..15388144 19..131 100 <- Plus
arm_2R 15388221..15388364 132..275 100 <- Plus
arm_2R 15388434..15388559 276..402 99   Plus

BO15867.5prime Sequence

413 bp (413 high quality bases) assembled on 2006-05-30

> BO15867.5prime
GAAGTTATCAGTCGACATGCTGCTGCAGCAGTGCGGAAAAATCATCAATC
TCGATCAGCATTTCACCGAGTGCTGGAATACAAGCCCATTGCGAAACTTT
GACTTCATCATCTCCCTTCTGAGCGTTATTTCCCTAAGTGTTGTTAAGAT
GGCCGCCATTCCACAAGGTGCATTCGCAGCCTGTAAGATTCGCGAGCAAT
TCAACGAACGTGAGCTGATCATCGCCCGTCTGAGGTCCGCTGCCGCAGAT
AAGGGTTCCGTTGACAACGGGAACGCCCTAACCCAACGCGAGTACTCGCC
CAACAAGTACAACGACAAGCTGATGAACTCCATCTGGGGATTGTACAATC
GCTATTCCCCCCACAATGTGAAGAAGAACGAGTACGCCCCCACCAAGGCA
AGCTTTCTAGACC

BO15867.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:41:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG16926-PA 384 CG16926-RA 1..381 17..397 1880 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:06:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG16926-RB 979 CG16926-RB 367..747 17..397 1890 99.7 Plus
CG16926-RA 884 CG16926-RA 272..652 17..397 1890 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 19:06:15
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19500716..19500860 284..140 710 99.3 Minus
2R 25286936 2R 19500929..19501052 140..17 620 100 Minus
2R 25286936 2R 19500527..19500639 397..285 565 100 Minus
Blast to na_te.dros performed on 2015-02-11 19:06:17 has no hits.

BO15867.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:55:25 Download gff for BO15867.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16926-PA 1..384 17..400 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:00:45 Download gff for BO15867.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16926-PA 1..384 17..400 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 13:56:38 Download gff for BO15867.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 270..652 14..397 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:56:14 Download gff for BO15867.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 270..652 14..397 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 23:56:14 Download gff for BO15867.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 19500527..19500639 285..397 100 <- Minus
2R 19500716..19500859 141..284 99 <- Minus
2R 19500929..19501054 14..140 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 13:56:38 Download gff for BO15867.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15388032..15388144 285..397 100 <- Minus
arm_2R 15388221..15388364 141..284 99 <- Minus
arm_2R 15388434..15388559 14..140 99   Minus

BO15867.complete Sequence

415 bp (415 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633612

> BO15867.complete
GAAGTTATCAGTCGACATGCTGCTGCAGCAGTGCGGAAAAATCATCAATC
TCGATCAGCATTTCACCGAGTGCTGGAATACAAGCCCATTGCGAAACTTT
GACTTCATCATCTCCCTTCTGAGCGTTATTTCCCTAAGTGTTGTTAAGAT
GGCCGCCATTCCACAAGGTGCATTCGCAGCCTGCAAGATTCGCGAGCAAT
TCAACGAACGTGAGCTGATCATCGCCCGTCTGAGGTCCGCTGCCGCAGAT
AAGGGTTCCGTTGACAACGGGAACGCCCTAACCCAACGCGAGTACTCGCC
CAACAAGTACAACGACAAGCTGATGAACTCCATCTGGGGATTGTACAATC
GCTATTCCCCCCACAATGTGAAGAAGAACGAGTACGCCCCCACCAAGGCA
AGCTTTCTAGACCAT

BO15867.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:51:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG16926-RB 384 CG16926-PB 1..381 17..397 1905 100 Plus
CG16926-RA 384 CG16926-PA 1..381 17..397 1905 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:51:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG16926-RB 979 CG16926-RB 367..747 17..397 1905 100 Plus
CG16926-RA 884 CG16926-RA 272..652 17..397 1905 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:51:48
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19500716..19500860 284..140 725 100 Minus
2R 25286936 2R 19500929..19501052 140..17 620 100 Minus
2R 25286936 2R 19500527..19500639 397..285 565 100 Minus
Blast to na_te.dros performed on 2014-11-27 14:51:49 has no hits.

BO15867.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:06:28 Download gff for BO15867.complete
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 1..384 17..400 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:21:58 Download gff for BO15867.complete
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 243..625 14..397 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:46:11 Download gff for BO15867.complete
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 272..652 17..399 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:06:28 Download gff for BO15867.complete
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 243..625 14..397 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:54:25 Download gff for BO15867.complete
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 272..652 17..399 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:54:25 Download gff for BO15867.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19500524..19500639 285..399 98 <- Minus
2R 19500716..19500859 141..284 100 <- Minus
2R 19500929..19501052 17..140 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:46:11 Download gff for BO15867.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15388029..15388144 285..399 98 <- Minus
arm_2R 15388221..15388364 141..284 100 <- Minus
arm_2R 15388434..15388557 17..140 100   Minus

BO15867.pep Sequence

Translation from 16 to 415

> BO15867.pep
MLLQQCGKIINLDQHFTECWNTSPLRNFDFIISLLSVISLSVVKMAAIPQ
GAFAACKIREQFNERELIIARLRSAAADKGSVDNGNALTQREYSPNKYND
KLMNSIWGLYNRYSPHNVKKNEYAPTKASFLDH

BO15867.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:03:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG16926-PB 127 CG16926-PB 1..127 1..127 664 100 Plus
CG16926-PA 127 CG16926-PA 1..127 1..127 664 100 Plus