Clone Sequence Records
BO15892.3prime Sequence
770 bp (769 high quality bases) assembled on 2006-06-02
> BO15892.3prime
ATGGTCTAGAAAGCTTGCGTCTTCCTCATTAAGTACGGGATACACGAAGG
TATCGGCGGTATCCTTTCCGACGACGTTGCGGGCTATGCACTTGTAGTTG
CCCATATCCTCCCACTTGATCTCGGAGATCAGAAGATCGCCGTTGGCCAG
CACCCTGTGGCGATGTCCTTGGACGATCTCCTTGTTCTCGTTATTCAACC
AGGTGATCTCGGCGCGGGGACGGGCGTGCACGCGGCAGGGCAGCTGAATG
TTGGAGCCCATGAGGTCCAGATGCGTCTTCTCGGTGTAGATGATTCGCGG
TTTCTGGGCACCCGGGTAGGTCTTCTCCGGCGTCAGACGAGAGGAGCGAG
GAGGATGCACCACAGTGCTGGCATAGATGGTCTTGGAGCCAGTGCGTCCC
ACACACGTGTAGGTGCGGGCCTCGCTCAGCACGTGGTCGATGATATGCGA
CGATCGGACGCGCACAATGGCACTGGGCGCCTCTTCGGCAACCTGGTTGG
AGTCCAGATCATCGAGCTCCGAGCGGGGCAGGTGACCCACCACCCACTGG
ATGCTGGGCACTTGGGAGCCCATCATCTCGCAAACGATCTCGATGGTGGC
TCCATCGGCCTGCTGCAGCTTCGTCGGCGGCGTCTTGGTGAACTTGAGCC
AGTCGGCTTCGAAGGCTCGGTTGCGTGGCTTCTCCTCCTCCGCCTCGATG
GAGTTATCCACGTCGTTGCTATCGTCTACCAGGTCCACGGCTCTTCCGCG
GACAGTGGCGATGCTGCCGA
BO15892.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:41:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15009-PA | 801 | ImpL2-RA | 47..798 | 770..19 | 3760 | 100 | Minus |
| CG15009-PB | 792 | ImpL2-RB | 38..789 | 770..19 | 3760 | 100 | Minus |
| CG15009-PC | 804 | ImpL2-RC | 50..801 | 770..19 | 3760 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:29:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL2-RD | 2355 | CG15009-RD | 770..1521 | 770..19 | 3760 | 100 | Minus |
| ImpL2-RC | 989 | CG15009-RC | 108..859 | 770..19 | 3760 | 100 | Minus |
| ImpL2-RB | 1651 | CG15009-RB | 770..1521 | 770..19 | 3760 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:29:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4224927..4225666 | 31..770 | 3700 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 22:29:28 has no hits.
BO15892.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:56:05 Download gff for
BO15892.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-PB | 39..792 | 15..769 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:01:36 Download gff for
BO15892.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15009-PC | 51..804 | 15..769 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:11:56 Download gff for
BO15892.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RB | 771..1532 | 7..769 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:05:10 Download gff for
BO15892.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RB | 771..1532 | 7..769 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:05:10 Download gff for
BO15892.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4224927..4225665 | 31..769 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:11:56 Download gff for
BO15892.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4224927..4225665 | 31..769 | 100 | | Plus |
BO15892.5prime Sequence
830 bp (759 high quality bases) assembled on 2006-05-30
> BO15892.5prime
GAAGTTATCAGTCGACATGCAGAAAATGAATTTACATGTGTGCGCCTTAG
CGCTGCTGCTGTTCGGCAGCATCGCCACTGTCCGCGGAAGAGCCGTGGAC
CTGGTAGACGATAGCAACGACGTGGATAACTCCATCGAGGCGGAGGAGGA
GAAGCCACGCAACCGAGCCTTCGAAGCCGACTGGCTCAAGTTCACCAAGA
CGCCGCCGACGAAGCTGCAGCAGGCCGATGGAGCCACCATCGAGATCGTT
TGCGAGATGATGGGCTCCCAAGTGCCCAGCATCCAGTGGGTGGTGGGTCA
CCTGCCCCGCTCGGAGCTCGATGATCTGGACTCCAACCAGGTTGCCGAAG
AGGCGCCCAGTGCCATTGTGCGCGTCCGATCGTCGCATATCATCGACCAC
GTGCTGAGCGAGGCCCGCACCTACACGTGTGTGGGACGCACTGGCTCCAA
GACCATCTATGCCAGCACTGTGGTGCATCCTCCTCGCTCCTCTCGTCTGA
CGCCGGAGAAGACCTACCCGGGTGCCCAGAAACCGCGAATCATCTACACC
GAGAAGACGCATCTGGACCTCATGGGCTCCAACATTCAGCTGCCCTGCCG
CGTGCACGCCCGTCCCCGCGCCGAGATCACCTGGTTGAATAACGAGAACA
AGGAGATCGTCCAAGGACATCGCCACAGGGTGCTGGCCAACGGCGATCTT
CTGATCTCCGAGATCAAGTGGGAGGATATGGGCAACTACAAGTGCATAGC
CCGCAACGTCGTCGGAAAGGATACCGCCGATACCTTCGTGTATCCCGTAC
TTAATGAGGAAGACGCAAGCTTTCTAGACC
BO15892.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:41:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15009-PA | 801 | ImpL2-RA | 1..798 | 17..814 | 3990 | 100 | Plus |
| CG15009-PC | 804 | ImpL2-RC | 9..801 | 22..814 | 3965 | 100 | Plus |
| CG15009-PB | 792 | ImpL2-RB | 1..789 | 26..814 | 3945 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:35:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL2-RA | 1167 | CG15009-RA | 240..1037 | 17..814 | 3990 | 100 | Plus |
| ImpL2-RD | 2355 | CG15009-RD | 729..1521 | 22..814 | 3965 | 100 | Plus |
| ImpL2-RC | 989 | CG15009-RC | 67..859 | 22..814 | 3965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:35:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4224927..4225711 | 802..18 | 3925 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 19:35:51 has no hits.
BO15892.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:56:06 Download gff for
BO15892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15009-PA | 1..801 | 17..818 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:01:37 Download gff for
BO15892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15009-PA | 1..801 | 17..818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 10:30:24 Download gff for
BO15892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RA | 240..1048 | 17..826 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:53:57 Download gff for
BO15892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RA | 240..1048 | 17..826 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 23:53:57 Download gff for
BO15892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4224927..4225718 | 12..802 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:30:24 Download gff for
BO15892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4224927..4225718 | 12..802 | 99 | | Minus |
BO15892.complete Sequence
832 bp (832 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633618
> BO15892.complete
GAAGTTATCAGTCGACATGCAGAAAATGAATTTACATGTGTGCGCCTTAG
CGCTGCTGCTGTTCGGCAGCATCGCCACTGTCCGCGGAAGAGCCGTGGAC
CTGGTAGACGATAGCAACGACGTGGATAACTCCATCGAGGCGGAGGAGGA
GAAGCCACGCAACCGAGCCTTCGAAGCCGACTGGCTCAAGTTCACCAAGA
CGCCGCCGACGAAGCTGCAGCAGGCCGATGGAGCCACCATCGAGATCGTT
TGCGAGATGATGGGCTCCCAAGTGCCCAGCATCCAGTGGGTGGTGGGTCA
CCTGCCCCGCTCGGAGCTCGATGATCTGGACTCCAACCAGGTTGCCGAAG
AGGCGCCCAGTGCCATTGTGCGCGTCCGATCGTCGCATATCATCGACCAC
GTGCTGAGCGAGGCCCGCACCTACACGTGTGTGGGACGCACTGGCTCCAA
GACCATCTATGCCAGCACTGTGGTGCATCCTCCTCGCTCCTCTCGTCTGA
CGCCGGAGAAGACCTACCCGGGTGCCCAGAAACCGCGAATCATCTACACC
GAGAAGACGCATCTGGACCTCATGGGCTCCAACATTCAGCTGCCCTGCCG
CGTGCACGCCCGTCCCCGCGCCGAGATCACCTGGTTGAATAACGAGAACA
AGGAGATCGTCCAAGGACATCGCCACAGGGTGCTGGCCAACGGCGATCTT
CTGATCTCCGAGATCAAGTGGGAGGATATGGGCAACTACAAGTGCATAGC
CCGCAACGTCGTCGGAAAGGATACCGCCGATACCTTCGTGTATCCCGTAC
TTAATGAGGAAGACGCAAGCTTTCTAGACCAT
BO15892.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:40:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL2-RA | 801 | CG15009-PA | 1..798 | 17..814 | 3990 | 100 | Plus |
| ImpL2-RC | 804 | CG15009-PC | 9..801 | 22..814 | 3965 | 100 | Plus |
| ImpL2-RD | 792 | CG15009-PD | 1..789 | 26..814 | 3945 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:40:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL2-RA | 1167 | CG15009-RA | 240..1037 | 17..814 | 3990 | 100 | Plus |
| ImpL2-RD | 2355 | CG15009-RD | 729..1521 | 22..814 | 3965 | 100 | Plus |
| ImpL2-RC | 989 | CG15009-RC | 67..859 | 22..814 | 3965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:40:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4224927..4225711 | 802..18 | 3925 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:40:23 has no hits.
BO15892.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:51:55 Download gff for
BO15892.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RA | 1..801 | 17..818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:07:34 Download gff for
BO15892.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RA | 240..1048 | 17..826 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:50:22 Download gff for
BO15892.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RA | 240..1037 | 17..816 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:51:55 Download gff for
BO15892.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RA | 240..1048 | 17..826 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:51:25 Download gff for
BO15892.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RA | 240..1037 | 17..816 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:51:25 Download gff for
BO15892.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4224927..4225711 | 17..802 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:50:22 Download gff for
BO15892.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4224927..4225711 | 17..802 | 99 | | Minus |
BO15892.pep Sequence
Translation from 16 to 832
> BO15892.pep
MQKMNLHVCALALLLFGSIATVRGRAVDLVDDSNDVDNSIEAEEEKPRNR
AFEADWLKFTKTPPTKLQQADGATIEIVCEMMGSQVPSIQWVVGHLPRSE
LDDLDSNQVAEEAPSAIVRVRSSHIIDHVLSEARTYTCVGRTGSKTIYAS
TVVHPPRSSRLTPEKTYPGAQKPRIIYTEKTHLDLMGSNIQLPCRVHARP
RAEITWLNNENKEIVQGHRHRVLANGDLLISEIKWEDMGNYKCIARNVVG
KDTADTFVYPVLNEEDASFLDH
BO15892.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:02:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL2-PA | 266 | CG15009-PA | 1..266 | 1..266 | 1390 | 100 | Plus |
| ImpL2-PC | 267 | CG15009-PC | 4..267 | 3..266 | 1380 | 100 | Plus |
| ImpL2-PD | 263 | CG15009-PD | 1..263 | 4..266 | 1375 | 100 | Plus |
| ImpL2-PB | 263 | CG15009-PB | 1..263 | 4..266 | 1375 | 100 | Plus |
| Nrg-PH | 1239 | CG1634-PH | 341..512 | 59..255 | 152 | 26.7 | Plus |
