Clone BO15903 Report

Search the DGRC for BO15903

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:159
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptJupiter-RA
Protein status:BO15903.pep: validated full length
Sequenced Size:625

Clone Sequence Records

BO15903.3prime Sequence

623 bp (623 high quality bases) assembled on 2006-06-02

> BO15903.3prime
ATGGTCTAGAAAGCTTGCCCACAGGCCCGACGAGTAGCCGCCTGGGGGAA
TGCGGTTCTTGTTGATCACCGGAGTGCCGCCATTGGACGACTCCTGGCGC
TGGGAATACTCGTTGGCTACGACCTTGTAGCCCTCGCCTGTGACGGGGTT
GCCCTTGCTCATATTGCGGAAGACTGATCTCGAGCCACTGTTCATCTTGA
GGTTCTCGGTGGAGGACGACACCGAAGACGAGGCCGAGGACACCGATCCG
CTCTTGCCGTTGTAGTGGCCATTGGTGGTCAGCAGCTTCTGGGCGGCAAC
GGCCTCTGTGTTCTGACCAAAGGGAATGCTGCTCTTCATGTGGTTCTTGC
CGGGGGTGATCGGGCGGGTGGGCTCCCCAAACAGCCGAGAGTGGGAGTCG
ACGGTCTTCTGGCCGCGACGTGGTGCATCACCGTTGTTTTTCACTCCATT
ATCTTTCTCGGCAGCGAATATGTTGGACGCCATGCGATTCTTCACGTTCC
TGGGGGTCTGCGGCATCTCCGATCCAAAGATGTCGCTCGATCCGCCGCCC
GGGGGCCTCAGCACCTTGCTGCTGGCCTGATTATCGGTGCAATCAAAGTT
AGAGATCATGTCGACTGATAACT

BO15903.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:41:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG31363-PA 594 Jupiter-RA 1..591 609..19 2955 100 Minus
CG31363-PD 576 Jupiter-RD 1..436 609..174 2180 100 Minus
CG31363-PC 594 Jupiter-RC 63..454 565..174 1960 100 Minus
CG31363-PH 609 Jupiter-RH 211..469 432..174 1295 100 Minus
CG31363-PE 627 Jupiter-RE 229..487 432..174 1295 100 Minus
CG31363-PH 609 Jupiter-RH 1..178 609..432 890 100 Minus
CG31363-PH 609 Jupiter-RH 470..606 155..19 685 100 Minus
CG31363-PD 576 Jupiter-RD 437..573 155..19 685 100 Minus
CG31363-PE 627 Jupiter-RE 488..624 155..19 685 100 Minus
CG31363-PC 594 Jupiter-RC 455..591 155..19 685 100 Minus
CG31363-PB 558 Jupiter-RB 419..555 155..19 685 100 Minus
CG31363-PE 627 Jupiter-RE 63..196 565..432 670 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:38:01
Subject Length Description Subject Range Query Range Score Percent Strand
Jupiter-RA 1535 CG31363-RA 160..750 609..19 2955 100 Minus
Jupiter-RD 1517 CG31363-RD 160..732 609..19 2675 97 Minus
Jupiter-RC 1581 CG31363-RC 268..796 565..19 2455 96.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:37:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11592367..11592625 174..432 1295 100 Plus
3R 32079331 3R 11591171..11591307 19..155 685 100 Plus
3R 32079331 3R 11593631..11593770 430..569 685 99.3 Plus
3R 32079331 3R 11619703..11619747 565..609 225 100 Plus
Blast to na_te.dros performed on 2015-01-31 10:37:58 has no hits.

BO15903.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:56:12 Download gff for BO15903.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31363-PA 1..594 15..609 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:01:47 Download gff for BO15903.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31363-PA 1..594 15..609 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:41:35 Download gff for BO15903.3prime
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RA 160..753 15..609 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:49:40 Download gff for BO15903.3prime
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RA 160..753 15..609 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:49:40 Download gff for BO15903.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 11593633..11593766 432..565 100 <- Plus
3R 11619704..11619747 566..609 100   Plus
3R 11591168..11591307 15..155 98 <- Plus
3R 11591995..11592012 156..173 100 <- Plus
3R 11592367..11592624 174..431 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:41:35 Download gff for BO15903.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7416890..7417029 15..155 98 <- Plus
arm_3R 7417717..7417734 156..173 100 <- Plus
arm_3R 7418089..7418346 174..431 100 <- Plus
arm_3R 7419355..7419488 432..565 100 <- Plus
arm_3R 7445426..7445469 566..609 100   Plus

BO15903.5prime Sequence

623 bp (623 high quality bases) assembled on 2006-06-02

> BO15903.5prime
GAAGTTATCAGTCGACATGATCTCTAACTTTGATTGCACCGATAATCAGG
CCAGCAGCAAGGTGCTGAGGCCCCCGGGCGGCGGATCGAGCGACATCTTT
GGATCGGAGATGCCGCAGACCCCCAGGAACGTGAAGAATCGCATGGCGTC
CAACATATTCGCTGCCGAGAAAGATAATGGAGTGAAAAACAACGGTGATG
CACCACGTCGCGGCCAGAAGACCGTCGACTCCCACTCTCGGCTGTTTGGG
GAGCCCACCCGCCCGATCACCCCCGGCAAGAACCACATGAAGAGCAGCAT
TCCCTTTGGTCAGAACACAGAGGCCGTTGCCGCCCAGAAGCTGCTGACCA
CCAATGGCCACTACAACGGCAAGAGCGGATCGGTGTCCTCGGCCTCGTCT
TCGGTGTCGTCCTCCACCGAGAACCTCAAGATGAACAGTGGCTCGAGATC
AGTCTTCCGCAATATGAGCAAGGGCAACCCCGTCACAGGCGAGGGCTACA
AGGTCGTAGCCAACGAGTATTCCCAGCGCCAGGAGTCGTCCAATGGCGGC
ACTCCGGTGATCAACAAGAACCGCATTCCCCCAGGCGGCTACTCGTCGGG
CCTGTGGGCAAGCTTTCTAGACC

BO15903.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:41:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG31363-PA 594 Jupiter-RA 1..591 17..607 2955 100 Plus
CG31363-PD 576 Jupiter-RD 1..436 17..452 2180 100 Plus
CG31363-PC 594 Jupiter-RC 63..454 61..452 1960 100 Plus
CG31363-PH 609 Jupiter-RH 211..469 194..452 1295 100 Plus
CG31363-PE 627 Jupiter-RE 229..487 194..452 1295 100 Plus
CG31363-PH 609 Jupiter-RH 1..178 17..194 890 100 Plus
CG31363-PH 609 Jupiter-RH 470..606 471..607 685 100 Plus
CG31363-PD 576 Jupiter-RD 437..573 471..607 685 100 Plus
CG31363-PE 627 Jupiter-RE 488..624 471..607 685 100 Plus
CG31363-PC 594 Jupiter-RC 455..591 471..607 685 100 Plus
CG31363-PB 558 Jupiter-RB 419..555 471..607 685 100 Plus
CG31363-PE 627 Jupiter-RE 63..196 61..194 670 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:34:06
Subject Length Description Subject Range Query Range Score Percent Strand
Jupiter-RA 1535 CG31363-RA 160..750 17..607 2955 100 Plus
Jupiter-RD 1517 CG31363-RD 160..732 17..607 2675 97 Plus
Jupiter-RC 1581 CG31363-RC 268..796 61..607 2455 96.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:34:03
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11592367..11592625 452..194 1295 100 Minus
3R 32079331 3R 11591171..11591307 607..471 685 100 Minus
3R 32079331 3R 11593631..11593770 196..57 685 99.3 Minus
3R 32079331 3R 11619703..11619747 61..17 225 100 Minus
Blast to na_te.dros performed on 2015-02-11 09:34:05 has no hits.

BO15903.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:56:13 Download gff for BO15903.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31363-PA 1..594 17..611 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:01:48 Download gff for BO15903.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31363-PA 1..594 17..611 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 23:00:43 Download gff for BO15903.5prime
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RA 160..753 17..611 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:05:31 Download gff for BO15903.5prime
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RA 160..753 17..611 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:05:31 Download gff for BO15903.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 11591168..11591307 471..611 98 <- Minus
3R 11591995..11592012 453..470 100 <- Minus
3R 11592367..11592624 195..452 100 <- Minus
3R 11593633..11593766 61..194 100 <- Minus
3R 11619704..11619747 17..60 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 23:00:43 Download gff for BO15903.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7416890..7417029 471..611 98 <- Minus
arm_3R 7417717..7417734 453..470 100 <- Minus
arm_3R 7418089..7418346 195..452 100 <- Minus
arm_3R 7419355..7419488 61..194 100 <- Minus
arm_3R 7445426..7445469 17..60 100   Minus

BO15903.complete Sequence

625 bp (625 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633621

> BO15903.complete
GAAGTTATCAGTCGACATGATCTCTAACTTTGATTGCACCGATAATCAGG
CCAGCAGCAAGGTGCTGAGGCCCCCGGGCGGCGGATCGAGCGACATCTTT
GGATCGGAGATGCCGCAGACCCCCAGGAACGTGAAGAATCGCATGGCGTC
CAACATATTCGCTGCCGAGAAAGATAATGGAGTGAAAAACAACGGTGATG
CACCACGTCGCGGCCAGAAGACCGTCGACTCCCACTCTCGGCTGTTTGGG
GAGCCCACCCGCCCGATCACCCCCGGCAAGAACCACATGAAGAGCAGCAT
TCCCTTTGGTCAGAACACAGAGGCCGTTGCCGCCCAGAAGCTGCTGACCA
CCAATGGCCACTACAACGGCAAGAGCGGATCGGTGTCCTCGGCCTCGTCT
TCGGTGTCGTCCTCCACCGAGAACCTCAAGATGAACAGTGGCTCGAGATC
AGTCTTCCGCAATATGAGCAAGGGCAACCCCGTCACAGGCGAGGGCTACA
AGGTCGTAGCCAACGAGTATTCCCAGCGCCAGGAGTCGTCCAATGGCGGC
ACTCCGGTGATCAACAAGAACCGCATTCCCCCAGGCGGCTACTCGTCGGG
CCTGTGGGCAAGCTTTCTAGACCAT

BO15903.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:39:08
Subject Length Description Subject Range Query Range Score Percent Strand
Jupiter-RA 594 CG31363-PA 1..591 17..607 2955 100 Plus
Jupiter-RD 576 CG31363-PD 1..573 17..607 2650 97 Plus
Jupiter-RC 594 CG31363-PC 63..591 61..607 2430 96.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:39:09
Subject Length Description Subject Range Query Range Score Percent Strand
Jupiter-RA 1535 CG31363-RA 160..750 17..607 2955 100 Plus
Jupiter-RD 1517 CG31363-RD 160..732 17..607 2650 97 Plus
Jupiter-RC 1581 CG31363-RC 268..796 61..607 2430 96.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:39:06
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11592367..11592625 452..194 1295 100 Minus
3R 32079331 3R 11591171..11591307 607..471 685 100 Minus
3R 32079331 3R 11593631..11593770 196..57 685 99.3 Minus
3R 32079331 3R 11619703..11619747 61..17 225 100 Minus
Blast to na_te.dros performed on 2014-11-28 08:39:07 has no hits.

BO15903.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:59:44 Download gff for BO15903.complete
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RA 1..594 17..611 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:02:29 Download gff for BO15903.complete
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RA 188..778 17..609 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:06 Download gff for BO15903.complete
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RA 160..750 17..609 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:59:44 Download gff for BO15903.complete
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RA 188..781 17..611 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:22:18 Download gff for BO15903.complete
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RA 160..750 17..609 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:22:18 Download gff for BO15903.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11592367..11592624 195..452 100 <- Minus
3R 11593633..11593766 61..194 100 <- Minus
3R 11619704..11619747 17..60 100   Minus
3R 11591169..11591307 471..609 98 <- Minus
3R 11591995..11592012 453..470 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:06 Download gff for BO15903.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7419355..7419488 61..194 100 <- Minus
arm_3R 7445426..7445469 17..60 100   Minus
arm_3R 7416891..7417029 471..609 98 <- Minus
arm_3R 7417717..7417734 453..470 100 <- Minus
arm_3R 7418089..7418346 195..452 100 <- Minus

BO15903.pep Sequence

Translation from 16 to 625

> BO15903.pep
MISNFDCTDNQASSKVLRPPGGGSSDIFGSEMPQTPRNVKNRMASNIFAA
EKDNGVKNNGDAPRRGQKTVDSHSRLFGEPTRPITPGKNHMKSSIPFGQN
TEAVAAQKLLTTNGHYNGKSGSVSSASSSVSSSTENLKMNSGSRSVFRNM
SKGNPVTGEGYKVVANEYSQRQESSNGGTPVINKNRIPPGGYSSGLWASF
LDH

BO15903.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:48:11
Subject Length Description Subject Range Query Range Score Percent Strand
Jupiter-PA 197 CG31363-PA 1..197 1..197 1027 100 Plus
Jupiter-PD 191 CG31363-PD 1..191 1..197 976 96.4 Plus
Jupiter-PH 202 CG31363-PH 1..202 1..197 954 91.3 Plus
Jupiter-PC 197 CG31363-PC 17..197 11..197 904 94.1 Plus
Jupiter-PE 208 CG31363-PE 17..208 11..197 882 88.9 Plus