BO15904.complete Sequence
2203 bp assembled on 2006-10-11
GenBank Submission: FJ633622
> BO15904.complete
GAAGTTATCAGTCGACATGGCCAGTAAAACCGCGCACTTCGTCCTGCCTA
ACACGCAGCCCATTGCCGATTTGGACTGCAAGAGTGCCTTCGAGAATCTC
ACCGAGAAGGAGAAGCTCTACGCCCACCACTTCAGCCAGGCCTCCTGGGA
CGGCGGACTCATTGCCTTGATCCAGTCCAGTCCGGAGGCGCCGCTCATCT
TCTCCCTGCTGCACCGCATTTTCCTAGCCGAAAAGATTCCTGTTCTTAGG
GCGAAAGCCCTGGAGGCGGGAGTGTCTGCTGATGATTTTACGGCCTTCCT
AGTGTACGCCTGCGGTGTGTTCGCCAACGCGGGCAACTACAAGGGTATGG
GCGACAGCAAGATCGTTCCCAATCTCTCAGAAAAGCAATTTGAGACTATA
GTAAAGGCATCCGCTGCTTACAGCGATGAGCCGCGCGTAGGCAAGATCTT
CGAGAAGGTCAAGAATCTGATTTATGCGCTCGAGTCGCGTAACGAGATCC
TGGGCTTTGCTCCCGACGGAATCACCACCTACTGGTCGGATAACTGCACC
AAGGAGGACTCCGAGATCGTGAACGCTTGGCTGACCTCAAAGCGTATCGA
ACCGTACATGTGCCGGACCTTCAAGATAGTTGAAAATGGTCAAACCGTCT
ACGATGTAAAGCTGGGCTCCGTGGCGGAGTCCACGCAGGACGGCATCACA
CTTCCGCTGGAAGAGTATAATGGCAACAAGTTTAGGGTGACACGCGGTGA
TTACCAGAAGCTGCTTCAGCGCGTCAACCAGCATCTGCTGCAGGCCCAGA
AATACGCAGCCAATGAAAACGAGTCCAAGATGATCGAGCACTATGTCCGA
TCCTTTGAACAGGGCTCGCTGGACGAGCACAAGAACGGATCGCGTTGGTG
GATCAAGGACAAGGGACCTGTCATCGAGACCTACATTGGTTTCATTGAGA
CATACAGGGATCCTGCTGGAGGTCGGGCTGAATTCGAGGGCTTCGTGGCC
ATGGTGAACAAGGAGAGCTCGGCCAAATTCTCCGAGCTGGTGAACCGCGC
CGAGAAACTAATAGAGTACCTGCCCTGGACGGAGCCTTACGAGAAGGACT
CTTACCTGAAGCCAGACTTCACATCCCTGGATGTCCTCACATTTGCCGGC
AGCGGAGTACCAGCGGGCATCAATATTCCCAATTACGACGAAATCCGCCA
GGATGAAGGCTTCAAGAACGTCTCGCTGGGCAATGTGCTGGCCAACATCA
ACCGCAAGGATCCCATTCCTTTCCTCACCGAGGAGGATCAAACTCTGATG
AAAGAGTACAAGGTGAAGGCTTTTGAGGTGCAAGTGGGCCTCCATGAACT
CCTAGGCCATGGTAGTGGCAAGCTATTCCGCATCGACGAAAATGGTGTGT
ACAACTTTGACAAGGAGAACACTAAGAACCTGGTCACCGGTGAACCCATC
ACCAAGTGGTATCTTCCTGGAGAAACTTACGACACCAAGTTCGGAGCAAT
TGGTTCCTCGTACGAGGAATGCCGCGCCGAGGCGGTGGGCTTGTATCTCT
CCCTGCAGCGTGACATCCTGGAGATCTTTGGCTTCAAGGACAAAGCCGAG
CAGGACAACATCATCTATGTCAACTGGCTGAGTCTCATCTGGAACGGCAT
GGGTGTGGCTCTGGAAATGTTCAACCCGAAGTCCAAGCTGTGGCTCCAGG
CGCACTCTCGCGCTCGTTTCGTGATCATGAAGGTGCTGCTGGAGGCAGGC
GAAGGACTCGTTAAGGTCGAGGAAACCGAAAAGGGTAAAAACCTTTTGCT
GACGGTGGATCGCAGCAAGATCGATACCGTGGGCAGGAAGGCGCTGGGCG
ATTTCCTGACCAAGCTGCAGGTGTACAAATCCACCGCCGACATCGAGGCA
GCTTCCAAGATGTACGAACACTACTCGAAGGTCGACGAGAGCGGATCGCA
TCCGTGGGCCAAGTGGCGGGATATCTGCCTGGCGCACAAGAAGCCGCGTA
TGATTCTCGTCCAGGCCAACACGGCGATCGGCCAGGACCAAAAGGTCCAG
CTGAAGACCTACGAGCCCACCCACGAGGGGTACATCCAGTCATGGGTGGA
GCGCTACCCCAACACTGACATCGACGATCTTCTGGAGAGCATCGTGGAGA
AGGACAAGAAGTATTTCCCGACTGCCTTCAACAACGCAAGCTTTCTAGAC
CAT
BO15904.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:30:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DppIII-RC | 2361 | CG7415-PC | 190..2358 | 17..2185 | 10845 | 100 | Plus |
| DppIII-RB | 2172 | CG7415-PB | 1..2169 | 17..2185 | 10845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:30:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DppIII-RC | 2613 | CG7415-RC | 331..2499 | 17..2185 | 10845 | 100 | Plus |
| DppIII-RB | 2398 | CG7415-RB | 116..2284 | 17..2185 | 10845 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:30:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8345458..8347351 | 292..2185 | 9470 | 100 | Plus |
| 3R | 32079331 | 3R | 8345124..8345400 | 17..293 | 1385 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:30:03 has no hits.
BO15904.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:31:08 Download gff for
BO15904.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DppIII-RC | 187..2361 | 14..2188 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:49:17 Download gff for
BO15904.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DppIII-RC | 263..2434 | 14..2185 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:00:10 Download gff for
BO15904.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DppIII-RB | 116..2284 | 17..2187 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:31:09 Download gff for
BO15904.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DppIII-RC | 263..2434 | 14..2185 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:02:52 Download gff for
BO15904.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DppIII-RB | 116..2284 | 17..2187 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:02:52 Download gff for
BO15904.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8345124..8345399 | 17..292 | 100 | -> | Plus |
| 3R | 8345459..8347351 | 293..2187 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:00:10 Download gff for
BO15904.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4170846..4171121 | 17..292 | 100 | -> | Plus |
| arm_3R | 4171181..4173073 | 293..2187 | 99 | | Plus |
BO15904.pep Sequence
Translation from 16 to 2203
> BO15904.pep
MASKTAHFVLPNTQPIADLDCKSAFENLTEKEKLYAHHFSQASWDGGLIA
LIQSSPEAPLIFSLLHRIFLAEKIPVLRAKALEAGVSADDFTAFLVYACG
VFANAGNYKGMGDSKIVPNLSEKQFETIVKASAAYSDEPRVGKIFEKVKN
LIYALESRNEILGFAPDGITTYWSDNCTKEDSEIVNAWLTSKRIEPYMCR
TFKIVENGQTVYDVKLGSVAESTQDGITLPLEEYNGNKFRVTRGDYQKLL
QRVNQHLLQAQKYAANENESKMIEHYVRSFEQGSLDEHKNGSRWWIKDKG
PVIETYIGFIETYRDPAGGRAEFEGFVAMVNKESSAKFSELVNRAEKLIE
YLPWTEPYEKDSYLKPDFTSLDVLTFAGSGVPAGINIPNYDEIRQDEGFK
NVSLGNVLANINRKDPIPFLTEEDQTLMKEYKVKAFEVQVGLHELLGHGS
GKLFRIDENGVYNFDKENTKNLVTGEPITKWYLPGETYDTKFGAIGSSYE
ECRAEAVGLYLSLQRDILEIFGFKDKAEQDNIIYVNWLSLIWNGMGVALE
MFNPKSKLWLQAHSRARFVIMKVLLEAGEGLVKVEETEKGKNLLLTVDRS
KIDTVGRKALGDFLTKLQVYKSTADIEAASKMYEHYSKVDESGSHPWAKW
RDICLAHKKPRMILVQANTAIGQDQKVQLKTYEPTHEGYIQSWVERYPNT
DIDDLLESIVEKDKKYFPTAFNNASFLDH
BO15904.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:36:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DppIII-PC | 786 | CG7415-PC | 64..786 | 1..723 | 3784 | 100 | Plus |
| DppIII-PB | 723 | CG7415-PB | 1..723 | 1..723 | 3784 | 100 | Plus |
