BO15911.complete Sequence
1978 bp assembled on 2006-10-11
GenBank Submission: FJ633625
> BO15911.complete
GAAGTTATCAGTCGACATGTTTCGGTCGTGTGTGCCCAAGGCGATTACCT
CTAGTCGCTGTTTCGCGCGGATGTACTCGAAGGACGTGCGCTTTGGCTCC
GGAGTACGGGCAATGATGATCCGGGGCGTTGATATTCTGGCTGATGCCGT
TGCTGTGACCATGGGGCCCAAGGGTCGCAGTGTGATCGTGGAGCGACCAT
GGACCTCGCCGAAGATCACCAAGGACGGCTTCACGGTCGCGCGCTCGATT
GCCCTAAAGGACCAGCACATGAATCTGGGCGCCAAGTTGGTCCAGGATGT
GGCCGATAATACGAATGAGTCGGCGGGTGACGGCACGACCACAGCAACAG
TTTTGGCTCGAGCGATTGCCAAGGAAGGATTCAATCAGATTACCATGGGG
GCTAATCCCGTGGAGATTCGTCGAGGTGTCATGTTAGCTGTTGACGTCGT
AAAGGACAAGCTGAAGGAAATGTCCAAGGCAGTGGAAACGCGTGAGGAGA
TCCAACAAGTAGCCACCCTCTCCGCGAACGGGGATACTGAAATTGGGCGG
CTCATTGGTGAGGCCACCGACAAAGTGGGTCCAAGAGGAACTATTACTGT
AAAGGATGGCAAGCGCCTGAAGGACGAGCTAAATATTATCCAGGGCCTGC
GCTTCGACAACGGCTATGTGTCGCCCTTTTTCGTAAACAGCTCCAAGGGG
TCCAAGGTGGAGTTTGCCAACGCCCTTGTAATGATATCCCTGAAGAAGAT
CACTGGACTCTCGCAAATAGTTAAAGGTCTGGAGCAATCCCTGAGGCAGC
GTCGTCCCCTGATCATCATAGCCGAGGACATCAGCGGGGAAGCCCTCAAT
GCTTTGGTCCTGAACAAGCTCAGGTTGGGCCTCCAGGTGTGCGCCGTCAA
ATCGCCCAGCTATGGACACCACCGCAAGGAGCTTATAGGCGATATATCCG
CTGCCACGGGAGCAACTATTTTCGGCGATGACATCAACTATTCCAAAATG
GAGGAGGCTAAGCTGGAGGATCTGGGTCAGGTTGGCGAGGCTGTGATTAG
CAAGGACAGCACCATGCTCCTGCAGGGCAAACCCAAGACAGGACTTTTGG
AAATGCGCATCCAGCAAATTCAAGATGAACTGGCGGAAAAGCAAATCAAG
CCAGAGCAGCGGGATCGTCTGCGCCAACGCCTCTCCGCCCTCACGAAGGG
CGTGGCAGTGCTGCACATTGGTGGAGGCAGTGAAGTTGAGGTGAATGAGA
AAAAGGACCGTGTGGTGGACGCCTTGAATGCCACTCGAGCGGCCATCGAA
GAGGGAATTGTCCCAGGTGGCGGTACGGCCTTTTTGCGCTGCATTCCCTA
CCTCCAGGAACTCAAAACGGAGAGTGCAGATCTCCAGAAGGGCGTCGATA
TCGTCTGCAATGCCCTGAGGATGCCTTGCCAGACCATAGCTCAAAACGCC
GGAGTTGATGGCCCAATGGTGGTGGCCAAGGTGTTGAATGGCTCGGAAGA
CTACGGCTACGATGCCATGGGCGATGAGTACTGTCGGCTGGTCGAGAAGG
GCATTATTGATCCCACAAAGGTGCTGCGGACCGCCATCACGGATGCAGCT
GGAGTGGCCTCTCTTCTGAGCACCACCGAGGTGGTTATCACCGACTCCCG
GAACGATGATCTTTTGTCCAAGTTGTCAGGAGCTGGCGGCGGAATGGATG
ATGGACTGGACATGAACATGGGTGGCTTAGAGGAGCTGGCAGCCTTAAGT
GGATTGGGTGGCATGGGTGGTATGGGAGGCATGGGTGGTATGGGAGGTAT
GGGAGGAATGGGAGGTGGATTCGGCGGAATGGGCGCTGGTGGCGGAATGA
GCGCTTCTGCCAGCAATGACGGTCCCACTGCCGAGGAGATGAATGAAATG
GTCAAGGCTATTCCCGGCATGGAGCAAGTAGAGGTGCGTGACATTGACAG
TGGGATGATGGCAAGCTTTCTAGACCAT
BO15911.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:43:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp60B-RA | 1947 | CG2830-PA | 1..1944 | 17..1960 | 9720 | 100 | Plus |
| Hsp60-RB | 1722 | CG12101-PB | 70..456 | 80..466 | 615 | 77.3 | Plus |
| Hsp60-RA | 1722 | CG12101-PA | 70..456 | 80..466 | 615 | 77.3 | Plus |
| Hsp60-RB | 1722 | CG12101-PB | 1398..1631 | 1411..1644 | 345 | 76.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:43:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp60B-RA | 2203 | CG2830-RA | 147..2090 | 17..1960 | 9720 | 100 | Plus |
| Hsp60-RB | 2328 | CG12101-RB | 193..579 | 80..466 | 615 | 77.3 | Plus |
| Hsp60-RA | 2357 | CG12101-RA | 222..608 | 80..466 | 615 | 77.3 | Plus |
| Hsp60-RB | 2328 | CG12101-RB | 1521..1754 | 1411..1644 | 345 | 76.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:43:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 728508..730451 | 17..1960 | 9720 | 100 | Plus |
| X | 23542271 | X | 11110110..11110496 | 80..466 | 615 | 77.3 | Plus |
| 2L | 23513712 | 2L | 5669058..5669388 | 108..438 | 425 | 75.2 | Plus |
| X | 23542271 | X | 11111501..11111734 | 1411..1644 | 345 | 76.5 | Plus |
| 2L | 23513712 | 2L | 5670500..5670578 | 1553..1631 | 230 | 86.1 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:43:30 has no hits.
BO15911.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:29:27 Download gff for
BO15911.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp60B-RA | 1..1947 | 17..1961 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:48:12 Download gff for
BO15911.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp60B-RA | 86..2040 | 5..1960 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:45:15 Download gff for
BO15911.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp60B-RA | 153..2090 | 23..1962 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:29:28 Download gff for
BO15911.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp60B-RA | 86..2040 | 5..1960 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:14:55 Download gff for
BO15911.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp60B-RA | 153..2090 | 23..1962 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:14:55 Download gff for
BO15911.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 728514..730451 | 23..1962 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:45:15 Download gff for
BO15911.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 728514..730451 | 23..1962 | 99 | | Plus |
BO15911.pep Sequence
Translation from 16 to 1978
> BO15911.pep
MFRSCVPKAITSSRCFARMYSKDVRFGSGVRAMMIRGVDILADAVAVTMG
PKGRSVIVERPWTSPKITKDGFTVARSIALKDQHMNLGAKLVQDVADNTN
ESAGDGTTTATVLARAIAKEGFNQITMGANPVEIRRGVMLAVDVVKDKLK
EMSKAVETREEIQQVATLSANGDTEIGRLIGEATDKVGPRGTITVKDGKR
LKDELNIIQGLRFDNGYVSPFFVNSSKGSKVEFANALVMISLKKITGLSQ
IVKGLEQSLRQRRPLIIIAEDISGEALNALVLNKLRLGLQVCAVKSPSYG
HHRKELIGDISAATGATIFGDDINYSKMEEAKLEDLGQVGEAVISKDSTM
LLQGKPKTGLLEMRIQQIQDELAEKQIKPEQRDRLRQRLSALTKGVAVLH
IGGGSEVEVNEKKDRVVDALNATRAAIEEGIVPGGGTAFLRCIPYLQELK
TESADLQKGVDIVCNALRMPCQTIAQNAGVDGPMVVAKVLNGSEDYGYDA
MGDEYCRLVEKGIIDPTKVLRTAITDAAGVASLLSTTEVVITDSRNDDLL
SKLSGAGGGMDDGLDMNMGGLEELAALSGLGGMGGMGGMGGMGGMGGMGG
GFGGMGAGGGMSASASNDGPTAEEMNEMVKAIPGMEQVEVRDIDSGMMAS
FLDH
BO15911.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:49:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp60B-PA | 648 | CG2830-PA | 1..648 | 1..648 | 3249 | 100 | Plus |
| Hsp60-PB | 573 | CG12101-PB | 1..572 | 1..595 | 1790 | 62 | Plus |
| Hsp60-PA | 573 | CG12101-PA | 1..572 | 1..595 | 1790 | 62 | Plus |
| Hsp60C-PB | 576 | CG7235-PB | 22..575 | 16..593 | 1708 | 59.3 | Plus |
| Hsp60C-PC | 576 | CG7235-PC | 22..575 | 16..593 | 1708 | 59.3 | Plus |
