Clone BO15915 Report

Search the DGRC for BO15915

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:159
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptCG1275-RC
Protein status:BO15915.pep: validated full length
Sequenced Size:796

Clone Sequence Records

BO15915.3prime Sequence

769 bp (672 high quality bases) assembled on 2006-06-02

> BO15915.3prime
ATGGTCTAGAAAGCTTGCCTCGTTGACAGAACTGGAGTTCAGCAGAGCCG
TGTCCTCGGGAATGGGCTTCCGCTTGTAGGAGGGCTCAGTGGCTAGGTAG
ACAACCAGCGCCCCGAAGACCACGTACATTACTCCAATCACATTGGCCAA
CACACCAGCCGGTGGAAGAGTGGAGTAAGCCGGAGTTTTGATGGCGAAGA
TGGCCTTCTCGGTTATGCCCATCAGGGCACTAGCAATAGCCAGAACGAAT
CCAAAGAGTCCGAAGTAGATGTGCAGCGGCATCATGGCGATCCTGTAGTT
CTCCCTCAACCCCGGCGCCAAAAAGGCCACAAATCCGGCCACATACTGCA
GCGAGAAGACGATCACCGCGGAGAGCCCCAGCCAAGAGTGCAGGGAGTAC
ATGTTGGGAATGGGCGGATTGGCCAAGTTGTGGGAATCGAAGACCGTCTT
CAGGGCAATCACCGTCAGAATGAATGCACCCATGTGGATGCCGGCGTGGG
TAAGCTTCAGAGTCTTCTTGCGCGTGGTGCGGAAACCACGATAGATCAGA
ATGGAGTTGCCATACAGGTAAATGAAGCCAATGGTCATGAACAGCGGATG
CCAGTTGAACTCCACGCCGGGATTTGAGGTGCCGGCCAGACCGCCGAAGT
GCTGGCCAATCCAGGTGGCCACCAGGACGATCATGGTCAGGCCGCACAGC
TGGGTGAGCACATAGAGCACCTTAAAGTTGATCAGCGCTGGATCCATGTT
GGGCTTGCCGCTGCCCAGT

BO15915.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:42:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG1275-PC 765 CG1275-RC 12..762 769..19 3730 99.8 Minus
CG1275-PB 1023 CG1275-RB 274..1020 765..19 3710 99.8 Minus
CG1275-PA 1023 CG1275-RA 274..1020 765..19 3710 99.8 Minus
CG1275-PD 732 CG1275-RD 1..729 747..19 3645 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 10:37:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG1275-RC 1300 CG1275-RC 203..953 769..19 3740 99.9 Minus
CG1275-RA 1574 CG1275-RA 472..1218 765..19 3720 99.9 Minus
CG1275-RB 1698 CG1275-RB 596..1342 765..19 3720 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 10:37:44
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2253329..2253692 191..554 1820 100 Plus
3L 28110227 3L 2253777..2253987 555..765 1040 99.5 Plus
3L 28110227 3L 2253100..2253271 19..190 860 100 Plus
Blast to na_te.dros performed on 2015-01-31 10:37:47 has no hits.

BO15915.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:56:20 Download gff for BO15915.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1275-PC 12..765 15..769 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:01:59 Download gff for BO15915.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1275-PC 12..765 15..769 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 23:41:34 Download gff for BO15915.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1275-RC 203..957 14..769 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 12:49:38 Download gff for BO15915.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1275-RC 203..957 14..769 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 12:49:38 Download gff for BO15915.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 2253096..2253271 14..190 98 <- Plus
3L 2253329..2253692 191..554 100 <- Plus
3L 2253777..2253988 555..769 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 23:41:34 Download gff for BO15915.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2253777..2253988 555..769 98   Plus
arm_3L 2253096..2253271 14..190 98 <- Plus
arm_3L 2253329..2253692 191..554 100 <- Plus

BO15915.5prime Sequence

794 bp (724 high quality bases) assembled on 2006-06-02

> BO15915.5prime
GAAGTTATCAGTCGACATGTTGTTCTCACTGGGCAGCGGCAAGGCCAACA
TGGATCCAGCGCTGATCAACTTTAAGGTGCTCTATGTGCTCACCCAGCTG
TGCGGCCTGACCATGATCGTCCTGGTGGCCACCTGGATTGGCCAGCACTT
CGGCGGTCTGGCCGGCACCTCAAATCCCGGCGTGGAGTTCAACTGGCATC
CGCTGTTCATGACCATTGGCTTCATTTACCTGTATGGCAACTCCATTCTG
ATCTATCGTGGTTTCCGCACCACGCGCAAGAAGACTCTGAAGCTTACCCA
CGCCGGCATCCACATGGGTGCATTCATTCTGACGGTGATTGCCCTGAAGA
CGGTCTTCGATTCCCACAACTTGGCCAATCCGCCCATTCCCAACATGTAC
TCCCTGCACTCTTGGCTGGGGCTCTCCGCGGTGATCGTCTTCTCGCTGCA
GTATGTGGCCGGATTTGTGGCCTTTTTGGCGCCGGGGTTGAGGGAGAACT
ACAGGATCGCCATGATGCCGCTGCACATCTACTTCGGACTCTTTGGATTC
GTTCTGGCTATTGCTAGTGCCCTGATGGGCATAACCGAGAAGGCCATCTT
CGCCATCAAAACTCCGGCTTACTCCACTCTTCCACCGGCTGGTGTGTTGG
CCAATGTGATTGGAGTAATGTACGTGGTCTTCGGGGCGCTGGTTGTCTAC
CTAGCCACTGAGCCCTCCTACAAGCGGAAGCCCATTCCCGAGGACACGGC
TCTGCTGAACTCCAGTTCTGTCAACGAGGCAAGCTTTCTAGACC

BO15915.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:42:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG1275-PC 765 CG1275-RC 1..762 17..778 3810 100 Plus
CG1275-PB 1023 CG1275-RB 274..1020 32..778 3735 100 Plus
CG1275-PA 1023 CG1275-RA 274..1020 32..778 3735 100 Plus
CG1275-PD 732 CG1275-RD 1..729 50..778 3645 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 01:53:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG1275-RC 1300 CG1275-RC 191..953 16..778 3815 100 Plus
CG1275-RA 1574 CG1275-RA 472..1218 32..778 3735 100 Plus
CG1275-RB 1698 CG1275-RB 596..1342 32..778 3735 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 01:53:10
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2253329..2253692 606..243 1820 100 Minus
3L 28110227 3L 2253777..2253987 242..32 1055 100 Minus
3L 28110227 3L 2253100..2253271 778..607 860 100 Minus
Blast to na_te.dros performed on 2015-02-04 01:53:14 has no hits.

BO15915.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:56:21 Download gff for BO15915.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1275-PC 1..765 17..782 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:02:01 Download gff for BO15915.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1275-PC 1..765 17..782 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 20:40:35 Download gff for BO15915.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1275-RC 184..957 6..783 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:18:00 Download gff for BO15915.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1275-RC 184..957 6..783 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:18:00 Download gff for BO15915.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 2253096..2253271 607..783 98 <- Minus
3L 2253329..2253692 243..606 100 <- Minus
3L 2253777..2253986 33..242 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 20:40:35 Download gff for BO15915.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2253096..2253271 607..783 98 <- Minus
arm_3L 2253329..2253692 243..606 100 <- Minus
arm_3L 2253777..2253986 33..242 100 <- Minus

BO15915.complete Sequence

796 bp (796 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633627

> BO15915.complete
GAAGTTATCAGTCGACATGTTGTTCTCACTGGGCAGCGGCAAGGCCAACA
TGGATCCAGCGCTGATCAACTTTAAGGTGCTCTATGTGCTCACCCAGCTG
TGCGGCCTGACCATGATCGTCCTGGTGGCCACCTGGATTGGCCAGCACTT
CGGCGGTCTGGCCGGCACCTCAAATCCCGGCGTGGAGTTCAACTGGCATC
CGCTGTTCATGACCATTGGCTTCATTTACCTGTATGGCAACTCCATTCTG
ATCTATCGTGGTTTCCGCACCACGCGCAAGAAGACTCTGAAGCTTACCCA
CGCCGGCATCCACATGGGTGCATTCATTCTGACGGTGATTGCCCTGAAGA
CGGTCTTCGATTCCCACAACTTGGCCAATCCGCCCATTCCCAACATGTAC
TCCCTGCACTCTTGGCTGGGGCTCTCCGCGGTGATCGTCTTCTCGCTGCA
GTATGTGGCCGGATTTGTGGCCTTTTTGGCGCCGGGGTTGAGGGAGAACT
ACAGGATCGCCATGATGCCGCTGCACATCTACTTCGGACTCTTTGGATTC
GTTCTGGCTATTGCTAGTGCCCTGATGGGCATAACCGAGAAGGCCATCTT
CGCCATCAAAACTCCGGCTTACTCCACTCTTCCACCGGCTGGTGTGTTGG
CCAATGTGATTGGAGTAATGTACGTGGTCTTCGGGGCGCTGGTTGTCTAC
CTAGCCACTGAGCCCTCCTACAAGCGGAAGCCCATTCCCGAGGACACGGC
TCTGCTGAACTCCAGTTCTGTCAACGAGGCAAGCTTTCTAGACCAT

BO15915.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:59:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG1275-RC 765 CG1275-PC 1..762 17..778 3810 100 Plus
CG1275-RA 1023 CG1275-PA 274..1020 32..778 3735 100 Plus
CG1275-RB 1023 CG1275-PB 274..1020 32..778 3735 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:59:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG1275-RC 1300 CG1275-RC 191..953 16..778 3815 100 Plus
CG1275-RA 1574 CG1275-RA 472..1218 32..778 3735 100 Plus
CG1275-RB 1698 CG1275-RB 596..1342 32..778 3735 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:59:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2253329..2253692 606..243 1820 100 Minus
3L 28110227 3L 2253777..2253987 242..32 1055 100 Minus
3L 28110227 3L 2253100..2253271 778..607 860 100 Minus
Blast to na_te.dros performed on 2014-11-27 14:59:21 has no hits.

BO15915.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:56:04 Download gff for BO15915.complete
Subject Subject Range Query Range Percent Splice Strand
CG1275-RC 1..765 17..782 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:06:30 Download gff for BO15915.complete
Subject Subject Range Query Range Percent Splice Strand
CG1275-RC 130..903 6..783 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:47:34 Download gff for BO15915.complete
Subject Subject Range Query Range Percent Splice Strand
CG1275-RC 197..953 22..780 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:56:04 Download gff for BO15915.complete
Subject Subject Range Query Range Percent Splice Strand
CG1275-RC 130..903 6..783 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:57:24 Download gff for BO15915.complete
Subject Subject Range Query Range Percent Splice Strand
CG1275-RC 197..953 22..780 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:57:24 Download gff for BO15915.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2253098..2253271 607..780 98 <- Minus
3L 2253777..2253992 23..242 98   Minus
3L 2253329..2253692 243..606 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:47:34 Download gff for BO15915.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2253777..2253992 23..242 98   Minus
arm_3L 2253098..2253271 607..780 98 <- Minus
arm_3L 2253329..2253692 243..606 100 <- Minus

BO15915.pep Sequence

Translation from 16 to 796

> BO15915.pep
MLFSLGSGKANMDPALINFKVLYVLTQLCGLTMIVLVATWIGQHFGGLAG
TSNPGVEFNWHPLFMTIGFIYLYGNSILIYRGFRTTRKKTLKLTHAGIHM
GAFILTVIALKTVFDSHNLANPPIPNMYSLHSWLGLSAVIVFSLQYVAGF
VAFLAPGLRENYRIAMMPLHIYFGLFGFVLAIASALMGITEKAIFAIKTP
AYSTLPPAGVLANVIGVMYVVFGALVVYLATEPSYKRKPIPEDTALLNSS
SVNEASFLDH

BO15915.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:38:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG1275-PC 254 CG1275-PC 1..254 1..254 1307 100 Plus
CG1275-PA 340 CG1275-PA 92..340 6..254 1284 100 Plus
CG1275-PB 340 CG1275-PB 92..340 6..254 1284 100 Plus
CG1275-PD 243 CG1275-PD 1..243 12..254 1253 100 Plus
nemy-PL 256 CG8776-PL 25..237 19..228 281 33.6 Plus