Clone BO15919 Report

Search the DGRC for BO15919

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:159
Well:19
Vector:pDNR-Dual
Associated Gene/TranscriptCG31274-RA
Protein status:BO15919.pep:
Sequenced Size:715

Clone Sequence Records

BO15919.3prime Sequence

713 bp (670 high quality bases) assembled on 2006-06-02

> BO15919.3prime
ATGGTCTAGAAAGCTTGCGTTTGTGGAGGAGCCGTTGCCAAACATCCGTC
CGCTGTGCGATTTTCTGGAATACTTTGGACGGATGATGTCCTTGAAAGTG
AATGCGGATGCGAGTGGAGGCTTTTCCGAATTGCTCGTGGAGTCCGGACC
CTGTCCTTGTGAGGAAGACAGCGTCGCATAAGCTGCATTCCTGCTGGTTG
GAAGTCCATCGAGATATTTTAGCTGGGGAAGCACCTGTAGTATATACTCG
CGGGGTCCTTGGCCCCCGAAAACTGTGCGGATGCCAGGATTCCCCATGCA
AGAGAGCTGATCCAGCGCAGGACAGTGCCGTTCGATGCGGTGTATCCAAT
CGGTTATATTTGCTATATCGCAATTGTTGATCCACAAGATCCTTAAGCTC
GGCAAATAAGGAAAAGTGTTTATGTCCAGGTTTACGTTGCGGTCCAGGAT
TAAAGTGTCCAGATCCTCGAAAAAGGAGAGAAATCTCAAGTTTCGGAAAT
CATTGTGACTCAAATCGAGAAACTTGGTCTGCGCTGCGAATTTGTCGGCC
AGTCGCCGCGGAATTGTCTTCAGGTTCTCATAGGCCAGCGAAATGCGTCC
GTTGTCCTCTAGGATGCTTTCCGAAAATGATACATCTTCACTTGGACAAC
TGCTGATGGAAATGTTGCCACTAAAGGAATACGGATTCGGCGTAATCATG
TCGACTGATAACT

BO15919.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:42:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG31274-PA 684 CG31274-RA 1..681 699..19 3405 100 Minus
CG31274-PB 843 CG31274-RB 160..840 699..19 3405 100 Minus
CG31447-PA 843 MESK4-RA 160..840 699..19 3405 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:15:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG31274-RB 1399 CG31274-RB 281..961 699..19 3405 100 Minus
MESK4-RB 1488 CG31447-RB 271..951 699..19 3405 100 Minus
MESK4-RA 1390 CG31447-RA 271..951 699..19 3405 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-03 07:14:58
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16989518..16989882 383..19 1825 100 Minus
3R 32079331 3R 16993730..16994094 383..19 1825 100 Minus
3R 32079331 3R 16989138..16989455 699..382 1590 100 Minus
3R 32079331 3R 16993350..16993667 699..382 1590 100 Minus
Blast to na_te.dros performed on 2015-02-03 07:15:02 has no hits.

BO15919.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:56:26 Download gff for BO15919.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31274-PA 1..684 16..699 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:02:07 Download gff for BO15919.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31447-PA 160..843 16..699 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 04:36:57 Download gff for BO15919.3prime
Subject Subject Range Query Range Percent Splice Strand
MESK4-RB 271..956 14..699 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-03 07:43:07 Download gff for BO15919.3prime
Subject Subject Range Query Range Percent Splice Strand
MESK4-RA 271..956 14..699 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-03 07:43:07 Download gff for BO15919.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 16989138..16989454 383..699 100 -> Minus
3R 16989519..16989887 14..382 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 04:36:57 Download gff for BO15919.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12814860..12815176 383..699 100 -> Minus
arm_3R 12815241..12815609 14..382 99   Minus

BO15919.5prime Sequence

713 bp (713 high quality bases) assembled on 2006-06-02

> BO15919.5prime
GAAGTTATCAGTCGACATGATTACGCCGAATCCGTATTCCTTTAGTGGCA
ACATTTCCATCAGCAGTTGTCCAAGTGAAGATGTATCATTTTCGGAAAGC
ATCCTAGAGGACAACGGACGCATTTCGCTGGCCTATGAGAACCTGAAGAC
AATTCCGCGGCGACTGGCCGACAAATTCGCAGCGCAGACCAAGTTTCTCG
ATTTGAGTCACAATGATTTCCGAAACTTGAGATTTCTCTCCTTTTTCGAG
GATCTGGACACTTTAATCCTGGACCGCAACGTAAACCTGGACATAAACAC
TTTTCCTTATTTGCCGAGCTTAAGGATCTTGTGGATCAACAATTGCGATA
TAGCAAATATAACCGATTGGATACACCGCATCGAACGGCACTGTCCTGCG
CTGGATCAGCTCTCTTGCATGGGGAATCCTGGCATCCGCACAGTTTTCGG
GGGCCAAGGACCCCGCGAGTATATACTACAGGTGCTTCCCCAGCTAAAAT
ATCTCGATGGACTTCCAACCAGCAGGAATGCAGCTTATGCGACGCTGTCT
TCCTCACAAGGACAGGGTCCGGACTCCACGAGCAATTCGGAAAAGCCTCC
ACTCGCATCCGCATTCACTTTCAAGGACATCATCCGTCCAAAGTATTCCA
GAAAATCGCACAGCGGACGGATGTTTGGCAACGGCTCCTCCACAAACGCA
AGCTTTCTAGACC

BO15919.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:42:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG31274-PA 684 CG31274-RA 1..681 17..697 3405 100 Plus
CG31274-PB 843 CG31274-RB 160..840 17..697 3405 100 Plus
CG31447-PA 843 MESK4-RA 160..840 17..697 3405 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 01:53:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG31274-RB 1399 CG31274-RB 281..961 17..697 3405 100 Plus
MESK4-RB 1488 CG31447-RB 271..951 17..697 3405 100 Plus
MESK4-RA 1390 CG31447-RA 271..951 17..697 3405 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 01:53:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16989518..16989882 333..697 1825 100 Plus
3R 32079331 3R 16993730..16994094 333..697 1825 100 Plus
3R 32079331 3R 16989138..16989455 17..334 1590 100 Plus
3R 32079331 3R 16993350..16993667 17..334 1590 100 Plus
Blast to na_te.dros performed on 2015-02-04 01:53:25 has no hits.

BO15919.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:56:27 Download gff for BO15919.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31274-PA 1..684 17..700 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:02:09 Download gff for BO15919.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31447-PA 160..843 17..700 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-09 20:40:37 Download gff for BO15919.5prime
Subject Subject Range Query Range Percent Splice Strand
MESK4-RB 271..956 17..702 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 04:18:01 Download gff for BO15919.5prime
Subject Subject Range Query Range Percent Splice Strand
MESK4-RA 271..956 17..702 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 04:18:01 Download gff for BO15919.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 16989138..16989454 17..333 100 -> Plus
3R 16989519..16989887 334..702 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-09 20:40:37 Download gff for BO15919.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12814860..12815176 17..333 100 -> Plus
arm_3R 12815241..12815609 334..702 99   Plus

BO15919.complete Sequence

715 bp (715 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633629

> BO15919.complete
GAAGTTATCAGTCGACATGATTACGCCGAATCCGTATTCCTTTAGTGGCA
ACATTTCCATCAGCAGTTGTCCAAGTGAAGATGTATCATTTTCGGAAAGC
ATCCTAGAGGACAACGGACGCATTTCGCTGGCCTATGAGAACCTGAAGAC
AATTCCGCGGCGACTGGCCGACAAATTCGCAGCGCAGACCAAGTTTCTCG
ATTTGAGTCACAATGATTTCCGAAACTTGAGATTTCTCTCCTTTTTCGAG
GATCTGGACACTTTAATCCTGGACCGCAACGTAAACCTGGACATAAACAC
TTTTCCTTATTTGCCGAGCTTAAGGATCTTGTGGATCAACAATTGCGATA
TAGCAAATATAACCGATTGGATACACCGCATCGAACGGCACTGTCCTGCG
CTGGATCAGCTCTCTTGCATGGGGAATCCTGGCATCCGCACAGTTTTCGG
GGGCCAAGGACCCCGCGAGTATATACTACAGGTGCTTCCCCAGCTAAAAT
ATCTCGATGGACTTCCAACCAGCAGGAATGCAGCTTATGCGACGCTGTCT
TCCTCACAAGGACAGGGTCCGGACTCCACGAGCAATTCGGAAAAGCCTCC
ACTCGCATCCGCATTCACTTTCAAGGACATCATCCGTCCAAAGTATTCCA
GAAAATCGCACAGCGGACGGATGTTTGGCAACGGCTCCTCCACAAACGCA
AGCTTTCTAGACCAT

BO15919.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:55:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG31274-RB 843 CG31274-PB 160..840 17..697 3405 100 Plus
MESK4-RB 843 CG31447-PB 160..840 17..697 3405 100 Plus
MESK4-RA 843 CG31447-PA 160..840 17..697 3405 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:55:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG31274-RB 1399 CG31274-RB 281..961 17..697 3405 100 Plus
MESK4-RB 1488 CG31447-RB 271..951 17..697 3405 100 Plus
MESK4-RA 1390 CG31447-RA 271..951 17..697 3405 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:55:20
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16993730..16994094 333..697 1825 100 Plus
3R 32079331 3R 16989518..16989882 333..697 1825 100 Plus
3R 32079331 3R 16989138..16989455 17..334 1590 100 Plus
3R 32079331 3R 16993350..16993667 17..334 1590 100 Plus
Blast to na_te.dros performed on 2014-11-27 10:55:21 has no hits.

BO15919.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:57:35 Download gff for BO15919.complete
Subject Subject Range Query Range Percent Splice Strand
CG31274-RB 160..843 17..700 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:08:42 Download gff for BO15919.complete
Subject Subject Range Query Range Percent Splice Strand
CG31274-RB 160..845 17..702 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:42:57 Download gff for BO15919.complete
Subject Subject Range Query Range Percent Splice Strand
MESK4-RB 271..951 17..699 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:57:35 Download gff for BO15919.complete
Subject Subject Range Query Range Percent Splice Strand
CG31274-RB 160..845 17..702 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:34:13 Download gff for BO15919.complete
Subject Subject Range Query Range Percent Splice Strand
MESK4-RA 271..951 17..699 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:34:13 Download gff for BO15919.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16989138..16989454 17..333 100 -> Plus
3R 16989519..16989882 334..699 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:42:57 Download gff for BO15919.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12814860..12815176 17..333 100 -> Plus
arm_3R 12815241..12815604 334..699 99   Plus

BO15919.pep Sequence

Translation from 16 to 715

> BO15919.pep
MITPNPYSFSGNISISSCPSEDVSFSESILEDNGRISLAYENLKTIPRRL
ADKFAAQTKFLDLSHNDFRNLRFLSFFEDLDTLILDRNVNLDINTFPYLP
SLRILWINNCDIANITDWIHRIERHCPALDQLSCMGNPGIRTVFGGQGPR
EYILQVLPQLKYLDGLPTSRNAAYATLSSSQGQGPDSTSNSEKPPLASAF
TFKDIIRPKYSRKSHSGRMFGNGSSTNASFLDH

BO15919.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:16:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG31274-PB 280 CG31274-PB 54..280 1..227 1193 100 Plus
MESK4-PB 280 CG31447-PB 54..280 1..227 1193 100 Plus
MESK4-PA 280 CG31447-PA 54..280 1..227 1193 100 Plus
CG31076-PB 182 CG31076-PB 7..153 32..164 162 32.4 Plus