BO15922.complete Sequence
2326 bp assembled on 2006-10-11
GenBank Submission: FJ633630
> BO15922.complete
GAAGTTATCAGTCGACATGTCCGCGTCAGTAAGAAATACAGTCACTAGCC
AAGAAAATGGGAGTATCTTTAAACGGTCCAGTAACTTAGACAACGAACTC
AAAAAGAAGTCCGTGGTGGTTAATCAGACACAAGCCGAAGAGTCTAAGGC
TAAGAAGAAAGATACTACGCACTATTACAGTGTGGAAACACTTGCCGACC
TGCAGTATCGATCTCAGATAAAGGTTTTGGAAAAGATCTATGGCGAGGAG
GTTGATATGACACCTAAGTCGATCCAAGATGACACCTATGTGGAGCAGTT
CATGAAGTACAACCTAAATGTCATGCACCAAATGACTAACTTCACTACAA
TGGTAGCGAAGAGCACGACCAGATCCCGCACGCGGTCTAGTGTTCGGGCC
GGAATAGGCGGCAATAAGCAGTCCATTGACGACCTGATGAACGGGATACT
TTATGAAACTATTAACTGGGAACCGTACAGCACTGTTGAGGCTCTCGAAG
AGGCGTACGAGCCAAAGCCGTATACCAAGTCCTTTTTAAAGATCACCTTA
CGCAAGTCTGACTTCTTCGAAATTCACAGCCAGACGCAGACGACGGTGGC
CAAGGGATCGCCCGAGGGCGACGATGCGGAGCGAGACAACCGAAACTACG
AGTATCTGACAATAGGGAAAGGCAAAATTCGCCGGCGCTCAGACAATGAC
GCTCAGACAGATACTCTGCTCTTCACCACTCGGGCAGTCAACACCATCCT
CATAACCAAGGCCACCGTCAGCTCTTACGTTTCCAACTTTGAGATGTACG
ACACGCTGAACAATATCACCAAGGAGTTCGCAACAGCCACTATGAGTTCG
GTAAAGGACCTGACCTCGGCTCTAGCGCAGACGGAGGATGCGGATACCTT
TGAGGACGACGAGGCCGTTGCCGAAAAAGACAAGGTCAGCAGCCAGATAG
AGCGCCTGTTCCGGAGCCCCGAGTTTCGCAACGCCATCATGTACATGGGC
CGCACGCTCTCGAGCAACACAAACGAGGCGGGGTTACGACGCTTCCGTAA
CTTTGACCAGGTGGAACGCTGGAACGCGGAGGCCGAGTACGTCTACTCGA
TGAACTTGCTCTTTCGGCTGGTACCGGAGCCCAGCAAAGACGAGCGCAAG
GCCGTAAGCGACATTGATTTCTGCCGCAGCAATGGTGACATCCTGGCTGT
AGCCTACGGACTGTACTCATTTTCCTCACAGCACGTACCGACCTCCGGCA
GCGTTTTCCTGTGGAGCATTAAAAATCCAGGCGAGCCGGAGCGCGCATAC
TACTACGATGTGCCAGTAACGGCAATAAACTTCTCGCCATTCTTGCCATC
CTTGCTCGCCATTGGTCTGTACGACGGCAGCGTGGAAGTGCGAGATGTGA
GCAGTTTGCAGGACACACCCGTTGCGGTCTCGCAGCGCAGCACTTCGCCA
GGCTCCTCGCCGGTGGTTGCCATCCGCTGGATCAAACAAGTTTCAGACGA
CGATCATGAAACAGACATCGATCCATTCCTGAGCCTCTCCCAGGATGGCT
CGGTCACCCGCTTCCGGATTATCAAAAGTCCCTTCCTGCTTGGTTTTACC
CAAATGATTCTGGAGCGAGTCGAGGGGCATCCTGAGGGCATTTTCGTTCA
CCCATCGTCGCGTATCCCCTGCGAGTCTAACCGCCACCCGCAAGGCTTAA
GCATCACTACACATCCTCTGCACAAGGACATTTACTACGTGCTGACAGAT
GAGGGCTGCATCCACAAGTGCTCAATCAATTATCAGCATCAGTACTTGGA
AGTCCTGCGTTGTCACGACGGGGGTGTCACCGTAATGGAGTTCTCGCCTT
GGTCTCCCAAACTCTTCCTCACCTGCGGCAACGATTGGTTCGTACGCATT
TGGGTCGATGGCATCACGCGACCTCTTCTCGAACTGCTAGACGAGATGAC
CCCAGTGCATTGGGCCAAGTGGAGCCCCACCCACTCTACGATTATTGTGA
CGGTGAACCGGGAAACCGCTAACGTCTGGGACTTTCGCCGAAATTTGCTA
AGACCCATGTCCAAGCACAAGATGGACTCTTCTTTTAATACTGTGGCCAG
GTTTTCCCACTGTGGTCGCACATTGGTTATTGGCAACGAGCGCGGGAACA
CGCTCTTCAACGCCCTGAACGACATGCCCTTTTCGCCACACTTCCAATAC
GACGAGTTAGAGAAAGCCATTTTCAAGGCAATTGGCAACGACCACGAGCT
TCTTATGGAGCTTAAAAGCATTGGTTTCTTTGGGTACCCAAACAAAAAAG
CAGTTTTTGCAAGCTTTCTAGACCAT
BO15922.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:58:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic61B-RA | 2295 | CG7051-PA | 1..2292 | 17..2308 | 11460 | 100 | Plus |
| Dic61B-RB | 2055 | CG7051-PB | 1..2052 | 257..2308 | 10260 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:58:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic61B-RA | 2616 | CG7051-RA | 192..2484 | 16..2308 | 11465 | 100 | Plus |
| Dic61B-RB | 2642 | CG7051-RB | 276..2510 | 74..2308 | 11175 | 100 | Plus |
| Dic61B-RB | 2642 | CG7051-RB | 192..249 | 16..73 | 290 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:58:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 150347..151791 | 1889..445 | 7225 | 100 | Minus |
| 3L | 28110227 | 3L | 151848..152071 | 445..222 | 1120 | 100 | Minus |
| 3L | 28110227 | 3L | 150082..150297 | 2102..1887 | 1080 | 100 | Minus |
| 3L | 28110227 | 3L | 149811..150020 | 2308..2099 | 1050 | 100 | Minus |
| 3L | 28110227 | 3L | 152121..152272 | 225..74 | 760 | 100 | Minus |
| 3L | 28110227 | 3L | 152341..152398 | 73..16 | 290 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:58:53 has no hits.
BO15922.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:31:17 Download gff for
BO15922.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7051-RA | 1..2295 | 17..2309 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:49:21 Download gff for
BO15922.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7051-RA | 189..2484 | 10..2308 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:35:42 Download gff for
BO15922.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic61B-RA | 193..2484 | 17..2310 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:31:18 Download gff for
BO15922.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7051-RA | 189..2484 | 10..2308 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:41:38 Download gff for
BO15922.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic61B-RA | 193..2484 | 17..2310 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:41:38 Download gff for
BO15922.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 150084..150296 | 1888..2100 | 100 | <- | Minus |
| 3L | 149809..150018 | 2101..2310 | 99 | <- | Minus |
| 3L | 150349..151790 | 446..1887 | 100 | <- | Minus |
| 3L | 151848..152069 | 224..445 | 100 | <- | Minus |
| 3L | 152123..152272 | 74..223 | 100 | <- | Minus |
| 3L | 152341..152397 | 17..73 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:35:42 Download gff for
BO15922.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 152123..152272 | 74..223 | 100 | <- | Minus |
| arm_3L | 149809..150018 | 2101..2310 | 99 | <- | Minus |
| arm_3L | 150084..150296 | 1888..2100 | 100 | <- | Minus |
| arm_3L | 150349..151790 | 446..1887 | 100 | <- | Minus |
| arm_3L | 151848..152069 | 224..445 | 100 | <- | Minus |
| arm_3L | 152341..152397 | 17..73 | 100 | | Minus |
BO15922.pep Sequence
Translation from 16 to 2326
> BO15922.pep
MSASVRNTVTSQENGSIFKRSSNLDNELKKKSVVVNQTQAEESKAKKKDT
THYYSVETLADLQYRSQIKVLEKIYGEEVDMTPKSIQDDTYVEQFMKYNL
NVMHQMTNFTTMVAKSTTRSRTRSSVRAGIGGNKQSIDDLMNGILYETIN
WEPYSTVEALEEAYEPKPYTKSFLKITLRKSDFFEIHSQTQTTVAKGSPE
GDDAERDNRNYEYLTIGKGKIRRRSDNDAQTDTLLFTTRAVNTILITKAT
VSSYVSNFEMYDTLNNITKEFATATMSSVKDLTSALAQTEDADTFEDDEA
VAEKDKVSSQIERLFRSPEFRNAIMYMGRTLSSNTNEAGLRRFRNFDQVE
RWNAEAEYVYSMNLLFRLVPEPSKDERKAVSDIDFCRSNGDILAVAYGLY
SFSSQHVPTSGSVFLWSIKNPGEPERAYYYDVPVTAINFSPFLPSLLAIG
LYDGSVEVRDVSSLQDTPVAVSQRSTSPGSSPVVAIRWIKQVSDDDHETD
IDPFLSLSQDGSVTRFRIIKSPFLLGFTQMILERVEGHPEGIFVHPSSRI
PCESNRHPQGLSITTHPLHKDIYYVLTDEGCIHKCSINYQHQYLEVLRCH
DGGVTVMEFSPWSPKLFLTCGNDWFVRIWVDGITRPLLELLDEMTPVHWA
KWSPTHSTIIVTVNRETANVWDFRRNLLRPMSKHKMDSSFNTVARFSHCG
RTLVIGNERGNTLFNALNDMPFSPHFQYDELEKAIFKAIGNDHELLMELK
SIGFFGYPNKKAVFASFLDH
BO15922.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:46:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic61B-PA | 764 | CG7051-PA | 1..764 | 1..764 | 3986 | 100 | Plus |
| Dic61B-PB | 684 | CG7051-PB | 1..684 | 81..764 | 3593 | 100 | Plus |
| CG13930-PA | 685 | CG13930-PA | 42..677 | 117..758 | 1301 | 43.2 | Plus |
| CG9313-PC | 739 | CG9313-PC | 355..681 | 374..712 | 310 | 28.7 | Plus |
| CG9313-PA | 739 | CG9313-PA | 355..681 | 374..712 | 310 | 28.7 | Plus |
