Clone Sequence Records
BO15966.3prime Sequence
236 bp (236 high quality bases) assembled on 2006-06-02
> BO15966.3prime
ATGGTCTAGAAAGCTTGCACCACCGTGGTGATCCAAAAATACACGGATAG
CCTTATGTCCTCTGCTCGTTTCTCTGACGCCTCCTCTGGCAGTGGAAACA
ACCGCAGTTGCGGCCAGATGACAAGGACTTACGCCGTCCACCGCACCACT
ACCATTGGAGGACATCGTTTTTGGGGCGTCTTTGGTATTCCTCGATGATG
CACTGATCTCGTTCGAATTCATGTCGACTGATAACT
BO15966.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:42:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9284-PA | 207 | CG9284-RA | 1..204 | 222..19 | 1020 | 100 | Minus |
CG9284-PB | 207 | CG9284-RB | 1..204 | 222..19 | 1020 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-11 11:51:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 11:51:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21803640..21803844 | 223..19 | 1025 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 11:51:06 has no hits.
BO15966.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:57:05 Download gff for
BO15966.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9284-PA | 1..207 | 18..222 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:02:59 Download gff for
BO15966.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9284-PB | 1..207 | 18..222 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:19:27 Download gff for
BO15966.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21803636..21803844 | 19..231 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 13:19:27 Download gff for
BO15966.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21803636..21803844 | 19..231 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 20:33:08 Download gff for
BO15966.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17691141..17691349 | 19..231 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 20:33:08 Download gff for
BO15966.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17691141..17691349 | 19..231 | 98 | | Minus |
BO15966.5prime Sequence
236 bp (236 high quality bases) assembled on 2006-06-02
> BO15966.5prime
GAAGTTATCAGTCGACATGAATTCGAACGAGATCAGTGCATCATCGAGGA
ATACCAAAGACGCCCCAAAAACGATGTCCTCCAATGGTAGTGGTGCGGTG
GACGGCGTAAGTCCTTGTCATCTGGCCGCAACTGCGGTTGTTTCCACTGC
CAGAGGAGGCGTCAGAGAAACGAGCAGAGGACATAAGGCTATCCGTGTAT
TTTTGGATCACCACGGTGGTGCAAGCTTTCTAGACC
BO15966.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:42:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9284-PA | 207 | CG9284-RA | 1..204 | 17..220 | 1020 | 100 | Plus |
CG9284-PB | 207 | CG9284-RB | 1..204 | 17..220 | 1020 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-12 19:41:07 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:41:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21803640..21803844 | 16..220 | 1025 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 19:41:05 has no hits.
BO15966.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:57:06 Download gff for
BO15966.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9284-PA | 1..207 | 17..221 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:03:00 Download gff for
BO15966.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9284-PB | 1..207 | 17..221 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 00:11:44 Download gff for
BO15966.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21803636..21803844 | 8..220 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 00:11:44 Download gff for
BO15966.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21803636..21803844 | 8..220 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:30:55 Download gff for
BO15966.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17691141..17691349 | 8..220 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:30:55 Download gff for
BO15966.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17691141..17691349 | 8..220 | 98 | | Plus |
BO15966.complete Sequence
238 bp (238 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633643
> BO15966.complete
GAAGTTATCAGTCGACATGAATTCGAACGAGATCAGTGCATCATCGAGGA
ATACCAAAGACGCCCCAAAAACGATGTCCTCCAATGGTAGTGGTGCGGTG
GACGGCGTAAGTCCTTGTCATCTGGCCGCAACTGCGGTTGTTTCCACTGC
CAGAGGAGGCGTCAGAGAAACGAGCAGAGGACATAAGGCTATCCGTGTAT
TTTTGGATCACCACGGTGGTGCAAGCTTTCTAGACCAT
BO15966.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-26 16:13:24 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-26 16:13:25 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21803640..21803844 | 16..220 | 1025 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:13:23 has no hits.
BO15966.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:04:46 Download gff for
BO15966.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9284-RB | 1..207 | 17..221 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:19:19 Download gff for
BO15966.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9284-RB | 165..373 | 8..220 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:04:46 Download gff for
BO15966.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9284-RB | 165..373 | 8..220 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:13:58 Download gff for
BO15966.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21803641..21803844 | 17..222 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:13:58 Download gff for
BO15966.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21803641..21803844 | 17..222 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:55:20 Download gff for
BO15966.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17691146..17691349 | 17..222 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:55:20 Download gff for
BO15966.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17691146..17691349 | 17..222 | 99 | | Plus |
BO15966.pep Sequence
Translation from 16 to 238
> BO15966.pep
MNSNEISASSRNTKDAPKTMSSNGSGAVDGVSPCHLAATAVVSTARGGVR
ETSRGHKAIRVFLDHHGGASFLDH
Sequence BO15966.pep has no blast hits.