Clone Sequence Records
BO15968.3prime Sequence
347 bp (347 high quality bases) assembled on 2006-06-02
> BO15968.3prime
ATGGTCTAGAAAGCTTGCCTTGTTTGACTTGAGGAAGGCAATCAAATCGG
CCCGCTCCTCAGCCTTTTTAAGACCTGCGAACACCATCTTTGTTCCGGGA
ATGTATTTCTTCGGGTCCTTGAGGTACTCGTCCAAATTCCCCTCTGTCCA
GGTAACGCCCTTCTTTATATTGGCATCGGTATACTTGTATCCCGCTGCTG
TGCCACACTTGCGACCCACGACCCCGCCAAGATTTGGGCCCACCTTGTGT
TTGCCGCCCACTTCGTAGGTGTGGCACTGGGCGCACTTCTGCACAAATAT
CTTCTTGCCGTTCTCTGCATCACCAGAACCCATGTCGACTGATAACT
BO15968.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:42:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13263-PA | 318 | Cyt-c-d-RA | 1..315 | 333..19 | 1575 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:35:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyt-c-d-RB | 767 | CG13263-RB | 267..581 | 333..19 | 1575 | 100 | Minus |
Cyt-c-d-RA | 837 | CG13263-RA | 337..651 | 333..19 | 1575 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:35:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16719135..16719449 | 333..19 | 1575 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-30 18:35:12 has no hits.
BO15968.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:57:09 Download gff for
BO15968.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13263-PA | 1..318 | 18..333 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:03:05 Download gff for
BO15968.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13263-PA | 1..318 | 18..333 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 18:59:54 Download gff for
BO15968.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-d-RA | 337..651 | 19..333 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 20:13:01 Download gff for
BO15968.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-d-RA | 337..651 | 19..333 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 20:13:01 Download gff for
BO15968.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16719135..16719449 | 19..333 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 18:59:54 Download gff for
BO15968.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16719135..16719449 | 19..333 | 100 | | Minus |
BO15968.5prime Sequence
347 bp (347 high quality bases) assembled on 2006-06-02
> BO15968.5prime
GAAGTTATCAGTCGACATGGGTTCTGGTGATGCAGAGAACGGCAAGAAGA
TATTTGTGCAGAAGTGCGCCCAGTGCCACACCTACGAAGTGGGCGGCAAA
CACAAGGTGGGCCCAAATCTTGGCGGGGTCGTGGGTCGCAAGTGTGGCAC
AGCAGCGGGATACAAGTATACCGATGCCAATATAAAGAAGGGCGTTACCT
GGACAGAGGGGAATTTGGACGAGTACCTCAAGGACCCGAAGAAATACATT
CCCGGAACAAAGATGGTGTTCGCAGGTCTTAAAAAGGCTGAGGAGCGGGC
CGATTTGATTGCCTTCCTCAAGTCAAACAAGGCAAGCTTTCTAGACC
BO15968.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:42:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13263-PA | 318 | Cyt-c-d-RA | 1..315 | 17..331 | 1575 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 10:40:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyt-c-d-RB | 767 | CG13263-RB | 267..581 | 17..331 | 1575 | 100 | Plus |
Cyt-c-d-RA | 837 | CG13263-RA | 337..651 | 17..331 | 1575 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 10:40:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16719135..16719449 | 17..331 | 1575 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 10:40:09 has no hits.
BO15968.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:57:11 Download gff for
BO15968.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13263-PA | 1..318 | 17..332 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:03:07 Download gff for
BO15968.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13263-PA | 1..318 | 17..332 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 15:10:17 Download gff for
BO15968.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-d-RA | 337..651 | 17..331 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 12:22:48 Download gff for
BO15968.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-d-RA | 337..651 | 17..331 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 12:22:48 Download gff for
BO15968.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16719135..16719449 | 17..331 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 15:10:17 Download gff for
BO15968.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16719135..16719449 | 17..331 | 100 | | Plus |
BO15968.complete Sequence
349 bp (349 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633644
> BO15968.complete
GAAGTTATCAGTCGACATGGGTTCTGGTGATGCAGAGAACGGCAAGAAGA
TATTTGTGCAGAAGTGCGCCCAGTGCCACACCTACGAAGTGGGCGGCAAA
CACAAGGTGGGCCCAAATCTTGGCGGGGTCGTGGGTCGCAAGTGTGGCAC
AGCAGCGGGATACAAGTATACCGATGCCAATATAAAGAAGGGCGTTACCT
GGACAGAGGGGAATTTGGACGAGTACCTCAAGGACCCGAAGAAATACATT
CCCGGAACAAAGATGGTGTTCGCAGGTCTTAAAAAGGCTGAGGAGCGGGC
CGATTTGATTGCCTTCCTCAAGTCAAACAAGGCAAGCTTTCTAGACCAT
BO15968.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:57:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyt-c-d-RB | 318 | CG13263-PB | 1..315 | 17..331 | 1575 | 100 | Plus |
Cyt-c-d-RA | 318 | CG13263-PA | 1..315 | 17..331 | 1575 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:57:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyt-c-d-RB | 767 | CG13263-RB | 267..581 | 17..331 | 1575 | 100 | Plus |
Cyt-c-d-RA | 837 | CG13263-RA | 337..651 | 17..331 | 1575 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:57:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16719135..16719449 | 17..331 | 1575 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:57:56 has no hits.
BO15968.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:05:35 Download gff for
BO15968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-d-RA | 1..318 | 17..332 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:20:36 Download gff for
BO15968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-d-RA | 370..684 | 17..331 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:06:06 Download gff for
BO15968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-d-RA | 337..651 | 17..333 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:05:35 Download gff for
BO15968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-d-RA | 370..684 | 17..331 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:35:08 Download gff for
BO15968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-d-RA | 337..651 | 17..333 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:35:08 Download gff for
BO15968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16719135..16719449 | 17..333 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:06:06 Download gff for
BO15968.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16719135..16719449 | 17..333 | 99 | | Plus |
BO15968.pep Sequence
Translation from 16 to 349
> BO15968.pep
MGSGDAENGKKIFVQKCAQCHTYEVGGKHKVGPNLGGVVGRKCGTAAGYK
YTDANIKKGVTWTEGNLDEYLKDPKKYIPGTKMVFAGLKKAEERADLIAF
LKSNKASFLDH
BO15968.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:47:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyt-c-d-PB | 105 | CG13263-PB | 1..105 | 1..105 | 565 | 100 | Plus |
Cyt-c-d-PA | 105 | CG13263-PA | 1..105 | 1..105 | 565 | 100 | Plus |
Cyt-c-p-PB | 108 | CG17903-PB | 5..105 | 3..103 | 407 | 72.3 | Plus |
Cyt-c-p-PA | 108 | CG17903-PA | 5..105 | 3..103 | 407 | 72.3 | Plus |