Clone BO15969 Report

Search the DGRC for BO15969

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:159
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptCG16762-RA
Protein status:BO15969.pep: validated full length
Sequenced Size:796

Clone Sequence Records

BO15969.3prime Sequence

794 bp (707 high quality bases) assembled on 2006-06-02

> BO15969.3prime
ATGGTCTAGAAAGCTTGCGTTTAACAAATTCAAAAGCTGCTTGAACTGAT
CTTCGACGTTTAAAGGTGCCTCGGTGGTGGTTGGTGGTTCGGTGGGTGCC
TCGGTGGTCGTGGTAGTGGTGGTGGTGGTGGTCGATGTGGAGGTCGTGGA
TGTGGGCTTGGGCATGGGCTTCGGCTTAGCGCGACCATCCAGACAGGCCT
GCAGGTAGTTGTAGTTCCTGGCAGTGGACTCCACGTAGTGCCGCTCCGCC
CTCTGGCAGCACTGCCCATGGCGCAGATCTACCACTCGGTAGCGTTCCTC
CAGCACGCTGGCCGACTCCGAGGCGTTACCCGAGATGCTGTATGTGGAGA
CAGTGTTGTTGGAGCCCACATTGGCATGACATTGAAAGGATTCGAGGGTT
GTGTTGAGCTCGTTGCAAGCCCTGAGCTCGCTGCAAACTCTTTCGGATGA
AAGTCGGATAGTCCGGCGAGTGGCCAGGAAGTCGGCATCGATACCCTTCC
TGGAGTCCGCCGCCGCATTGTAGCATTTGGTGTAGTTGGCACTGTACAGC
TCCGCGATCAGGTTGGATTCACCGATGTAGCCACCGAAACATGCCACCGA
GGCGAAGGGATCTGTCTGCGTGACCCGTGAATTAAGGAACAGACGCGTGA
GGCCATCCTGGGTGGGCAGACCCACGTATGGAGGCAATGGTCGGCTGATA
CCCTCCGCAGGAGACAAAACCAATAAACCGATCATGGCCAGCGAGGCCAG
GATTTTTCCGGACCACATCTCGGGACACATGTCGACTGATAACT

BO15969.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:42:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG16762-PA 765 CG16762-RA 1..762 780..19 3735 99.6 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:04:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG16762-RA 885 CG16762-RA 21..782 780..19 3765 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:04:08
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2475180..2475594 366..780 2030 99.3 Plus
3L 28110227 3L 2474770..2475118 19..367 1745 100 Plus
Blast to na_te.dros performed on 2015-02-10 15:04:11 has no hits.

BO15969.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:57:12 Download gff for BO15969.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16762-PA 1..765 15..780 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:03:08 Download gff for BO15969.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16762-PA 1..765 15..780 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:33:08 Download gff for BO15969.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16762-RA 13..785 15..791 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:49:29 Download gff for BO15969.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16762-RA 13..785 15..791 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:49:29 Download gff for BO15969.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 2474767..2475117 15..366 99 <- Plus
3L 2475181..2475602 367..791 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:33:08 Download gff for BO15969.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2474767..2475117 15..366 99 <- Plus
arm_3L 2475181..2475602 367..791 98   Plus

BO15969.5prime Sequence

794 bp (794 high quality bases) assembled on 2006-06-02

> BO15969.5prime
GAAGTTATCAGTCGACATGTGTCCCGAGATGTCGTCCGTGAAAATCCTGG
CCTCGCTGGCCATGATCGGTTTATTGGTTTTGTCTCCTGCGGAGGGTATC
AGCCGACCATTGCCTCCATACGTGGGTCTGCCCACCCAGGATGGCCTCAC
GCGTCTGTTCCTTAATTCACGGGTCACGCAGACAGATCCCTTCGCCTCGG
TGGCATGTTTCGGTGGCTACATCGGTGAATCCAACCTGATCGCGGAGCTG
TACAGTGCCAACTACACCAAATGCTACAATGCGGCGGCGGACTCCAGGAA
GGGTATCGATGCCGACTTCCTGGCCACTCGCCGGACTATCCGACTTTCAT
CCGAAAGAGTTTGCAGCGAGCTCAGGGCTTGCAACGAGCTCAACACAACC
CTCGAATCCTTTCAATGTCATGCCAATGTGGGCTCCAACAACACTGTCTC
CACATACAGCATCTCGGGTAACGCCTCGGAGTCGGCCAGCGTGCTGGAGG
AACGCTACCGAGTGGTAGATCTGCGCCATGGGCAGTGCTGCCAGAGGGCG
GAGCGGCACTACGTGGAGTCCACTGCCAGGAACTACAACTACCTGCAGGC
CTGTCTGGATGGTCGCGCTAAGCCGAAGCCCATGCCCAAGCCCACATCCA
CGACCTCCACATCGACCACCACCACCACCACTACCACGACCACCGAGGCA
CCCACCGAACCACCAACCACCACCGAGGCACCTTTAAACGTCGAAGATCA
GTTCAAGCAGCTTTTGAATTTGTTAAACGCAAGCTTTCTAGACC

BO15969.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:42:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG16762-PA 765 CG16762-RA 1..762 17..778 3810 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:45:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG16762-RA 885 CG16762-RA 21..782 17..778 3810 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:45:48
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2475180..2475594 431..17 2075 100 Minus
3L 28110227 3L 2474770..2475118 778..430 1745 100 Minus
Blast to na_te.dros performed on 2015-02-10 21:45:51 has no hits.

BO15969.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:57:13 Download gff for BO15969.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16762-PA 1..765 17..782 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:03:10 Download gff for BO15969.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16762-PA 1..765 17..782 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 00:50:12 Download gff for BO15969.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16762-RA 13..785 6..782 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:50:16 Download gff for BO15969.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16762-RA 13..785 6..782 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:50:16 Download gff for BO15969.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 2474767..2475117 431..782 99 <- Minus
3L 2475181..2475602 6..430 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 00:50:12 Download gff for BO15969.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2474767..2475117 431..782 99 <- Minus
arm_3L 2475181..2475602 6..430 99   Minus

BO15969.complete Sequence

796 bp (796 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633645

> BO15969.complete
GAAGTTATCAGTCGACATGTGTCCCGAGATGTCGTCCGTGAAAATCCTGG
CCTCGCTGGCCATGATCGGTTTATTGGTTTTGTCTCCTGCGGAGGGTATC
AGCCGACCATTGCCTCCATACGTGGGTCTGCCCACCCAGGATGGCCTCAC
GCGTCTGTTCCTTAATTCACGGGTCACGCAGACAGATCCCTTCGCCTCGG
TGGCATGTTTCGGTGGCTACATCGGTGAATCCAACCTGATCGCGGAGCTG
TACAGTGCCAACTACACCAAATGCTACAATGCGGCGGCGGACTCCAGGAA
GGGTATCGATGCCGACTTCCTGGCCACTCGCCGGACTATCCGACTTTCAT
CCGAAAGAGTTTGCAGCGAGCTCAGGGCTTGCAACGAGCTCAACACAACC
CTCGAATCCTTTCAATGTCATGCCAATGTGGGCTCCAACAACACTGTCTC
CACATACAGCATCTCGGGTAACGCCTCGGAGTCGGCCAGCGTGCTGGAGG
AACGCTACCGAGTGGTAGATCTGCGCCATGGGCAGTGCTGCCAGAGGGCG
GAGCGGCACTACGTGGAGTCCACTGCCAGGAACTACAACTACCTGCAGGC
CTGTCTGGATGGTCGCGCTAAGCCGAAGCCCATGCCCAAGCCCACATCCA
CGACCTCCACATCGACCACCACCACCACCACTACCACGACCACCGAGGCA
CCCACCGAACCACCAACCACCACCGAGGCACCTTTAAACGTCGAAGATCA
GTTCAAGCAGCTTTTGAATTTGTTAAACGCAAGCTTTCTAGACCAT

BO15969.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:48:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG16762-RA 765 CG16762-PA 1..762 17..778 3810 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:48:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG16762-RA 885 CG16762-RA 21..782 17..778 3810 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:48:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2475180..2475594 431..17 2075 100 Minus
3L 28110227 3L 2474770..2475118 778..430 1745 100 Minus
Blast to na_te.dros performed on 2014-11-27 16:48:56 has no hits.

BO15969.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:51:42 Download gff for BO15969.complete
Subject Subject Range Query Range Percent Splice Strand
CG16762-RA 1..765 17..782 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:07:16 Download gff for BO15969.complete
Subject Subject Range Query Range Percent Splice Strand
CG16762-RA 1..765 17..782 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:58:53 Download gff for BO15969.complete
Subject Subject Range Query Range Percent Splice Strand
CG16762-RA 21..782 17..780 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:51:43 Download gff for BO15969.complete
Subject Subject Range Query Range Percent Splice Strand
CG16762-RA 1..765 17..782 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:27:37 Download gff for BO15969.complete
Subject Subject Range Query Range Percent Splice Strand
CG16762-RA 21..782 17..780 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:27:37 Download gff for BO15969.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2474768..2475117 431..780 99 <- Minus
3L 2475181..2475594 17..430 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:58:53 Download gff for BO15969.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2474768..2475117 431..780 99 <- Minus
arm_3L 2475181..2475594 17..430 100   Minus

BO15969.pep Sequence

Translation from 16 to 796

> BO15969.pep
MCPEMSSVKILASLAMIGLLVLSPAEGISRPLPPYVGLPTQDGLTRLFLN
SRVTQTDPFASVACFGGYIGESNLIAELYSANYTKCYNAAADSRKGIDAD
FLATRRTIRLSSERVCSELRACNELNTTLESFQCHANVGSNNTVSTYSIS
GNASESASVLEERYRVVDLRHGQCCQRAERHYVESTARNYNYLQACLDGR
AKPKPMPKPTSTTSTSTTTTTTTTTTEAPTEPPTTTEAPLNVEDQFKQLL
NLLNASFLDH

BO15969.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:03:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG16762-PA 254 CG16762-PA 1..254 1..254 1312 100 Plus
CG10911-PA 359 CG10911-PA 3..221 8..238 252 29.7 Plus
CG5767-PA 253 CG5767-PA 1..236 8..239 229 26.7 Plus
CG5770-PA 213 CG5770-PA 25..206 41..227 204 26.7 Plus
CG11470-PB 230 CG11470-PB 8..227 19..229 203 27.3 Plus