Clone BO15981 Report

Search the DGRC for BO15981

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:159
Well:81
Vector:pDNR-Dual
Associated Gene/TranscriptCG31451-RB
Protein status:BO15981.pep: validated full length
Sequenced Size:289

Clone Sequence Records

BO15981.5prime Sequence

287 bp (287 high quality bases) assembled on 2006-06-02

> BO15981.5prime
GAAGTTATCAGTCGACATGATTTTGCTTTACGATTCGACCCACTATCATC
CCAGATTGCGTAGCCTCCGGCGTCCTTGGCGACGCGACGTCGTCGTCCGG
ACCATCCTCCAGCACGCCTTCCAAAATTGGCGTTCACTGGATCGATTAGC
CCCCAGCAAATTGAATCGCAGCCCGCAGGAGATTTGGTTATTATCGCCTC
ATTTCGTACAAAGAGAAACCGCAACAAGGAAACACTGCACATCGTTTTTT
ACACCCTTGCGTTATGTTTTTGCAAGCTTTCTAGACC

BO15981.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:42:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG31451-PA 258 CG31451-RA 1..255 17..271 1275 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-12 05:04:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:04:25
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23984150..23984404 17..271 1275 100 Plus
Blast to na_te.dros performed 2015-02-12 05:04:28
Subject Length Description Subject Range Query Range Score Percent Strand
diver2 4917 diver2 DIVER2 4917bp 818..853 80..45 108 77.8 Minus

BO15981.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:57:35 Download gff for BO15981.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31451-PA 1..258 17..274 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:03:41 Download gff for BO15981.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31451-PA 1..258 17..274 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:26:28 Download gff for BO15981.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 23984150..23984408 17..275 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:26:28 Download gff for BO15981.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 23984150..23984408 17..275 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:54:03 Download gff for BO15981.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19809872..19810130 17..275 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:54:03 Download gff for BO15981.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19809872..19810130 17..275 99   Plus

BO15981.3prime Sequence

287 bp (287 high quality bases) assembled on 2006-06-02

> BO15981.3prime
ATGGTCTAGAAAGCTTGCAAAAACATAACGCAAGGGTGTAAAAAACGATG
TGCAGTGTTTCCTTGTTGCGGTTTCTCTTTGTACGAAATGAGGCGATAAT
AACCAAATCTCCTGCGGGCTGCGATTCAATTTGCTGGGGGCTAATCGATC
CAGTGAACGCCAATTTTGGAAGGCGTGCTGGAGGATGGTCCGGACGACGA
CGTCGCGTCGCCAAGGACGCCGGAGGCTACGCAATCTGGGATGATAGTGG
GTCGAATCGTAAAGCAAAATCATGTCGACTGATAACT

BO15981.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:42:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG31451-PA 258 CG31451-RA 1..255 273..19 1275 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-10 22:08:47 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:08:41
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23984150..23984404 273..19 1275 100 Minus
Blast to na_te.dros performed 2015-02-10 22:08:44
Subject Length Description Subject Range Query Range Score Percent Strand
diver2 4917 diver2 DIVER2 4917bp 818..853 210..245 108 77.8 Plus

BO15981.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:57:34 Download gff for BO15981.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31451-PA 1..258 16..273 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:03:39 Download gff for BO15981.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31451-PA 1..258 16..273 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:01:51 Download gff for BO15981.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 23984150..23984408 15..273 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:01:51 Download gff for BO15981.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 23984150..23984408 15..273 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:43:18 Download gff for BO15981.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19809872..19810130 15..273 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:43:18 Download gff for BO15981.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19809872..19810130 15..273 99   Minus

BO15981.complete Sequence

289 bp (289 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633651

> BO15981.complete
GAAGTTATCAGTCGACATGATTTTGCTTTACGATTCGACCCACTATCATC
CCAGATTGCGTAGCCTCCGGCGTCCTTGGCGACGCGACGTCGTCGTCCGG
ACCATCCTCCAGCACGCCTTCCAAAATTGGCGTTCACTGGATCGATTAGC
CCCCAGCAAATTGAATCGCAGCCCGCAGGAGATTTGGTTATTATCGCCTC
ATTTCGTACAAAGAGAAACCGCAACAAGGAAACACTGCACATCGTTTTTT
ACACCCTTGCGTTATGTTTTTGCAAGCTTTCTAGACCAT

BO15981.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 10:41:21 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 10:41:22 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:41:19
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23984150..23984404 17..271 1275 100 Plus
Blast to na_te.dros performed 2014-11-27 10:41:20
Subject Length Description Subject Range Query Range Score Percent Strand
diver2 4917 diver2 DIVER2 4917bp 818..853 80..45 108 77.8 Minus

BO15981.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:54:32 Download gff for BO15981.complete
Subject Subject Range Query Range Percent Splice Strand
CG31451-RA 1..258 17..274 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:26:47 Download gff for BO15981.complete
Subject Subject Range Query Range Percent Splice Strand
CG31451-RA 805..1063 17..275 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:54:32 Download gff for BO15981.complete
Subject Subject Range Query Range Percent Splice Strand
CG31451-RA 805..1063 17..275 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:28:17 Download gff for BO15981.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23984150..23984404 17..273 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:28:17 Download gff for BO15981.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23984150..23984404 17..273 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:40:56 Download gff for BO15981.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19809872..19810126 17..273 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:40:56 Download gff for BO15981.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19809872..19810126 17..273 99   Plus

BO15981.pep Sequence

Translation from 16 to 289

> BO15981.pep
MILLYDSTHYHPRLRSLRRPWRRDVVVRTILQHAFQNWRSLDRLAPSKLN
RSPQEIWLLSPHFVQRETATRKHCTSFFTPLRYVFASFLDH
Sequence BO15981.pep has no blast hits.