Clone Sequence Records
BO15981.5prime Sequence
287 bp (287 high quality bases) assembled on 2006-06-02
> BO15981.5prime
GAAGTTATCAGTCGACATGATTTTGCTTTACGATTCGACCCACTATCATC
CCAGATTGCGTAGCCTCCGGCGTCCTTGGCGACGCGACGTCGTCGTCCGG
ACCATCCTCCAGCACGCCTTCCAAAATTGGCGTTCACTGGATCGATTAGC
CCCCAGCAAATTGAATCGCAGCCCGCAGGAGATTTGGTTATTATCGCCTC
ATTTCGTACAAAGAGAAACCGCAACAAGGAAACACTGCACATCGTTTTTT
ACACCCTTGCGTTATGTTTTTGCAAGCTTTCTAGACC
BO15981.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:42:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31451-PA | 258 | CG31451-RA | 1..255 | 17..271 | 1275 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-12 05:04:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 05:04:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23984150..23984404 | 17..271 | 1275 | 100 | Plus |
Blast to na_te.dros performed 2015-02-12 05:04:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
diver2 | 4917 | diver2 DIVER2 4917bp | 818..853 | 80..45 | 108 | 77.8 | Minus |
BO15981.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:57:35 Download gff for
BO15981.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31451-PA | 1..258 | 17..274 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:03:41 Download gff for
BO15981.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31451-PA | 1..258 | 17..274 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:26:28 Download gff for
BO15981.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23984150..23984408 | 17..275 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:26:28 Download gff for
BO15981.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23984150..23984408 | 17..275 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:54:03 Download gff for
BO15981.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19809872..19810130 | 17..275 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 02:54:03 Download gff for
BO15981.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19809872..19810130 | 17..275 | 99 | | Plus |
BO15981.3prime Sequence
287 bp (287 high quality bases) assembled on 2006-06-02
> BO15981.3prime
ATGGTCTAGAAAGCTTGCAAAAACATAACGCAAGGGTGTAAAAAACGATG
TGCAGTGTTTCCTTGTTGCGGTTTCTCTTTGTACGAAATGAGGCGATAAT
AACCAAATCTCCTGCGGGCTGCGATTCAATTTGCTGGGGGCTAATCGATC
CAGTGAACGCCAATTTTGGAAGGCGTGCTGGAGGATGGTCCGGACGACGA
CGTCGCGTCGCCAAGGACGCCGGAGGCTACGCAATCTGGGATGATAGTGG
GTCGAATCGTAAAGCAAAATCATGTCGACTGATAACT
BO15981.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:42:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31451-PA | 258 | CG31451-RA | 1..255 | 273..19 | 1275 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-10 22:08:47 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:08:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23984150..23984404 | 273..19 | 1275 | 100 | Minus |
Blast to na_te.dros performed 2015-02-10 22:08:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
diver2 | 4917 | diver2 DIVER2 4917bp | 818..853 | 210..245 | 108 | 77.8 | Plus |
BO15981.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:57:34 Download gff for
BO15981.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31451-PA | 1..258 | 16..273 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:03:39 Download gff for
BO15981.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31451-PA | 1..258 | 16..273 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:01:51 Download gff for
BO15981.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23984150..23984408 | 15..273 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:01:51 Download gff for
BO15981.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23984150..23984408 | 15..273 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:43:18 Download gff for
BO15981.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19809872..19810130 | 15..273 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 07:43:18 Download gff for
BO15981.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19809872..19810130 | 15..273 | 99 | | Minus |
BO15981.complete Sequence
289 bp (289 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633651
> BO15981.complete
GAAGTTATCAGTCGACATGATTTTGCTTTACGATTCGACCCACTATCATC
CCAGATTGCGTAGCCTCCGGCGTCCTTGGCGACGCGACGTCGTCGTCCGG
ACCATCCTCCAGCACGCCTTCCAAAATTGGCGTTCACTGGATCGATTAGC
CCCCAGCAAATTGAATCGCAGCCCGCAGGAGATTTGGTTATTATCGCCTC
ATTTCGTACAAAGAGAAACCGCAACAAGGAAACACTGCACATCGTTTTTT
ACACCCTTGCGTTATGTTTTTGCAAGCTTTCTAGACCAT
BO15981.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 10:41:21 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 10:41:22 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:41:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23984150..23984404 | 17..271 | 1275 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 10:41:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
diver2 | 4917 | diver2 DIVER2 4917bp | 818..853 | 80..45 | 108 | 77.8 | Minus |
BO15981.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:54:32 Download gff for
BO15981.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31451-RA | 1..258 | 17..274 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:26:47 Download gff for
BO15981.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31451-RA | 805..1063 | 17..275 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:54:32 Download gff for
BO15981.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31451-RA | 805..1063 | 17..275 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:28:17 Download gff for
BO15981.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23984150..23984404 | 17..273 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:28:17 Download gff for
BO15981.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23984150..23984404 | 17..273 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:40:56 Download gff for
BO15981.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19809872..19810126 | 17..273 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:40:56 Download gff for
BO15981.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19809872..19810126 | 17..273 | 99 | | Plus |
BO15981.pep Sequence
Translation from 16 to 289
> BO15981.pep
MILLYDSTHYHPRLRSLRRPWRRDVVVRTILQHAFQNWRSLDRLAPSKLN
RSPQEIWLLSPHFVQRETATRKHCTSFFTPLRYVFASFLDH
Sequence BO15981.pep has no blast hits.