Clone BO15984 Report

Search the DGRC for BO15984

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:159
Well:84
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO15984.pep: validated full length
Sequenced Size:286

Clone Sequence Records

BO15984.5prime Sequence

284 bp (284 high quality bases) assembled on 2006-06-02

> BO15984.5prime
GAAGTTATCAGTCGACATGTGTTGGGCGACATCAGGTTCAAGTTTTCGAA
CCGAAAGCACCAGATCCATAATCCAAATGTTTAAATCCGACGTCCTTGTC
TTGGCCATCGTCTCCTGCTCTGCTGCCAAGCCTGGACTGATTGGTGCGCC
TTTGGCCTACACTGCTTACGTGGCTTACTCTCCTCTGGCTGTACTAATGG
CCTACCCCTCGCCTTTGGCCTACTCCGCACCACTGAGCTACGCCGTTCCA
TCTGCACCGCTTCTTATCGCAAGCTTTCTAGACC

BO15984.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:42:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG32207-PA 255 CG32207-RA 1..252 17..268 1260 100 Plus
CG12519-PA 396 CG12519-RA 323..393 198..268 280 95.7 Plus
CG32213-PA 465 CG32213-RA 374..437 180..243 195 92.1 Plus
CG32208-PA 465 825-Oak-RA 374..437 180..243 195 92.1 Plus
CG32214-PA 426 CG32214-RA 335..400 180..245 180 90.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:40:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG18294-RA 507 CG18294-RA 14..163 36..185 345 82 Plus
CG12519-RB 600 CG12519-RB 12..161 36..185 345 82 Plus
CG12519-RA 507 CG12519-RA 12..161 36..185 345 82 Plus
CG12519-RB 600 CG12519-RB 357..445 180..268 340 92.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 19:40:40
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19477672..19477851 268..89 900 100 Minus
3L 28110227 3L 19423378..19423450 89..17 365 100 Minus
3L 28110227 3L 19477906..19477978 89..17 365 100 Minus
3L 28110227 3L 19472902..19472990 180..268 340 92.1 Plus
3L 28110227 3L 19487161..19487225 89..25 325 100 Minus
3L 28110227 3L 19486803..19486873 267..197 295 94.4 Minus
3L 28110227 3L 19467718..19467806 180..268 265 86.5 Plus
3L 28110227 3L 19423273..19423323 139..89 255 100 Minus
3L 28110227 3L 19471732..19471820 268..180 250 85.4 Minus
3L 28110227 3L 19476247..19476335 180..268 250 85.4 Plus
3L 28110227 3L 19422979..19423050 268..197 240 88.9 Minus
3L 28110227 3L 19467017..19467093 89..17 215 88.3 Minus
3L 28110227 3L 19472479..19472555 17..89 215 88.3 Plus
3L 28110227 3L 19475512..19475588 89..17 215 88.3 Minus
Blast to na_te.dros performed on 2015-02-12 19:40:44 has no hits.

BO15984.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:57:39 Download gff for BO15984.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32207-PA 1..255 17..272 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:03:47 Download gff for BO15984.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32207-PA 1..255 17..272 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-31 10:30:53 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2015-02-13 00:10:47 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 00:10:47 Download gff for BO15984.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 19477666..19477851 89..276 97 <- Minus
3L 19477907..19477980 14..88 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 10:30:53 Download gff for BO15984.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19470766..19470951 89..276 97 <- Minus
arm_3L 19471007..19471080 14..88 98   Minus

BO15984.complete Sequence

286 bp (286 high quality bases) assembled on 2006-08-24

GenBank Submission: FJ633654

> BO15984.complete
GAAGTTATCAGTCGACATGTGTTGGGCGACATCAGGTTCAAGTTTTCGAA
CCGAAAGCACCAGATCCATAATCCAAATGTTTAAATCCGACGTCCTTGTC
TTGGCCATCGTCTCCTGCTCTGCTGCCAAGCCTGGACTGATTGGTGCGCC
TTTGGCCTACACTGCTTACGTGGCTTACTCTCCTCTGGCTGTACTAATGG
CCTACCCCTCGCCTTTGGCCTACTCCGCACCACTGAGCTACGCCGTTCCA
TCTGCACCGCTTCTTATCGCAAGCTTTCTAGACCAT

BO15984.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:06:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG12519-RB 396 CG12519-PB 305..393 180..268 340 92.1 Plus
CG12519-RA 396 CG12519-PA 305..393 180..268 340 92.1 Plus
CG32214-RC 351 CG32214-PC 260..348 180..268 265 86.5 Plus
CG12519-RB 396 CG12519-PB 1..109 77..185 185 78 Plus
CG12519-RA 396 CG12519-PA 1..109 77..185 185 78 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:06:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG18294-RA 507 CG18294-RA 14..163 36..185 345 82 Plus
CG12519-RB 600 CG12519-RB 12..161 36..185 345 82 Plus
CG12519-RA 507 CG12519-RA 12..161 36..185 345 82 Plus
CG12519-RB 600 CG12519-RB 357..445 180..268 340 92.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19477672..19477851 268..89 900 100 Minus
3L 28110227 3L 19423378..19423450 89..17 365 100 Minus
3L 28110227 3L 19477906..19477978 89..17 365 100 Minus
3L 28110227 3L 19472902..19472990 180..268 340 92.1 Plus
3L 28110227 3L 19487161..19487225 89..25 325 100 Minus
3L 28110227 3L 19486803..19486873 267..197 295 94.4 Minus
3L 28110227 3L 19467718..19467806 180..268 265 86.5 Plus
3L 28110227 3L 19423273..19423323 139..89 255 100 Minus
3L 28110227 3L 19471732..19471820 268..180 250 85.4 Minus
3L 28110227 3L 19476247..19476335 180..268 250 85.4 Plus
3L 28110227 3L 19422979..19423050 268..197 240 88.9 Minus
3L 28110227 3L 19467017..19467093 89..17 215 88.3 Minus
3L 28110227 3L 19472479..19472555 17..89 215 88.3 Plus
3L 28110227 3L 19475512..19475588 89..17 215 88.3 Minus
Blast to na_te.dros performed on 2014-11-28 00:06:23 has no hits.

BO15984.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:51:31 Download gff for BO15984.complete
Subject Subject Range Query Range Percent Splice Strand
CG32207-RA 1..255 17..272 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:03:37 Download gff for BO15984.complete
Subject Subject Range Query Range Percent Splice Strand
CG32207-RA 486..745 14..276 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 19:45:37 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:51:31 Download gff for BO15984.complete
Subject Subject Range Query Range Percent Splice Strand
CG32207-RA 486..745 14..276 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 01:14:31 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:14:31 Download gff for BO15984.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19477670..19477851 89..270 98 <- Minus
3L 19477907..19477978 17..88 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:45:37 Download gff for BO15984.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19470770..19470951 89..270 98 <- Minus
arm_3L 19471007..19471078 17..88 100   Minus

BO15984.pep Sequence

Translation from 16 to 286

> BO15984.pep
MCWATSGSSFRTESTRSIIQMFKSDVLVLAIVSCSAAKPGLIGAPLAYTA
YVAYSPLAVLMAYPSPLAYSAPLSYAVPSAPLLIASFLDH

BO15984.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:03:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG32214-PC 116 CG32214-PC 1..116 21..84 175 41.4 Plus
CG32214-PB 116 CG32214-PB 1..116 21..84 175 41.4 Plus
CG14096-PA 122 CG14096-PA 1..57 21..86 171 56.1 Plus
CG12519-PB 131 CG12519-PB 1..57 21..86 171 56.1 Plus
CG12519-PA 131 CG12519-PA 1..57 21..86 171 56.1 Plus