Clone Sequence Records
BO15986.3prime Sequence
770 bp (747 high quality bases) assembled on 2006-06-02
> BO15986.3prime
ATGGTCTAGAAAGCTTGCTATATATTCACCTGCTGCCTTGTTTCCACTTT
CGTTCTTTTGGCCCGGCTGCTGCTGCTGTTGCTGCGGCTGCTCCGGGCTA
CCATTCAAATTCTGAAGCAGACTGATCTTCAAGTACACGCTACCCAGGTG
GACGTCGCGTCGCCGAATGGCAATGCACTTGCACTGCTCCAACAGGGATG
CCCTGTAGAGCTCCCTGAGCTCCAGGCGGCCCATGCCGAGCATTTCGTTG
AGACAGGTGCCGGGTTCGCGCCACCAAACCGTGATGTCTACATGGCCAGC
ACTCTGTTCCGGATCCTGCAGGCTCTTATCTTCCATATCGACCTGACGCT
GAGCCGTCTGCCCGAAACGGGTGCACTGCGTCAGGCTCTGGAACTTCTCC
GACTCGAACTGCATGATGTGGAACATCGGTTGGCGCGGCACTTTACGGAT
CAAGTCCCCCGACAGCTGGCACTCCACGGTGAAAATGGGTCGCACTTCGT
TCTGAACCAGTTCCATGCGTTGGGTTCCCTCCGGCTGCAATGTCAGTGCC
TCCAAGTGCAGCTGCAAGGCGTTGCAGCTGCGGAAGAGCTCCGGCGTCAT
CACCAGCTCATCATCCTCCGATTCCTGGGCGGTTTGCTCCGGCTCGGCTC
CCGGCCACAGGACCTCCTGCTGTTTCCTAATCTTAAGAGGTTCGGCGGAG
GCAGCAGTGGCGAAAAGGGCCACCAGGTCCGCGTCCAATTTCTTCATGGC
CTCCATGTCGACTGATAACT
BO15986.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:43:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32425-PB | 741 | CG32425-RB | 1..738 | 756..19 | 3690 | 100 | Minus |
CG32425-PE | 2280 | CG32425-RE | 1..727 | 756..30 | 3635 | 100 | Minus |
CG32425-PA | 2280 | CG32425-RA | 1..727 | 756..30 | 3635 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:21:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32425-RF | 2171 | CG32425-RF | 1166..1903 | 756..19 | 3690 | 100 | Minus |
CG32425-RB | 1090 | CG32425-RB | 85..822 | 756..19 | 3690 | 100 | Minus |
CG32425-RA | 2813 | CG32425-RA | 113..839 | 756..30 | 3635 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:21:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20510053..20510790 | 756..19 | 3690 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 04:21:46 has no hits.
BO15986.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:57:41 Download gff for
BO15986.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-PB | 1..741 | 16..756 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:03:48 Download gff for
BO15986.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-PB | 1..741 | 16..756 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 21:38:27 Download gff for
BO15986.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-RB | 80..827 | 12..763 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:53:09 Download gff for
BO15986.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-RB | 80..827 | 12..763 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 06:53:09 Download gff for
BO15986.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20510048..20510795 | 12..763 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 21:38:27 Download gff for
BO15986.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20503148..20503895 | 12..763 | 99 | | Minus |
BO15986.5prime Sequence
770 bp (770 high quality bases) assembled on 2006-06-02
> BO15986.5prime
GAAGTTATCAGTCGACATGGAGGCCATGAAGAAATTGGACGCGGACCTGG
TGGCCCTTTTCGCCACTGCTGCCTCCGCCGAACCTCTTAAGATTAGGAAA
CAGCAGGAGGTCCTGTGGCCGGGAGCCGAGCCGGAGCAAACCGCCCAGGA
ATCGGAGGATGATGAGCTGGTGATGACGCCGGAGCTCTTCCGCAGCTGCA
ACGCCTTGCAGCTGCACTTGGAGGCACTGACATTGCAGCCGGAGGGAACC
CAACGCATGGAACTGGTTCAGAACGAAGTGCGACCCATTTTCACCGTGGA
GTGCCAGCTGTCGGGGGACTTGATCCGTAAAGTGCCGCGCCAACCGATGT
TCCACATCATGCAGTTCGAGTCGGAGAAGTTCCAGAGCCTGACGCAGTGC
ACCCGTTTCGGGCAGACGGCTCAGCGTCAGGTCGATATGGAAGATAAGAG
CCTGCAGGATCCGGAACAGAGTGCTGGCCATGTAGACATCACGGTTTGGT
GGCGCGAACCCGGCACCTGTCTCAACGAAATGCTCGGCATGGGCCGCCTG
GAGCTCAGGGAGCTCTACAGGGCATCCCTGTTGGAGCAGTGCAAGTGCAT
TGCCATTCGGCGACGCGACGTCCACCTGGGTAGCGTGTACTTGAAGATCA
GTCTGCTTCAGAATTTGAATGGTAGCCCGGAGCAGCCGCAGCAACAGCAG
CAGCAGCCGGGCCAAAAGAACGAAAGTGGAAACAAGGCAGCAGGTGAATA
TATAGCAAGCTTTCTAGACC
BO15986.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 15:43:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32425-PB | 741 | CG32425-RB | 1..738 | 17..754 | 3690 | 100 | Plus |
CG32425-PE | 2280 | CG32425-RE | 1..727 | 17..743 | 3635 | 100 | Plus |
CG32425-PA | 2280 | CG32425-RA | 1..727 | 17..743 | 3635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 13:11:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32425-RF | 2171 | CG32425-RF | 1166..1903 | 17..754 | 3690 | 100 | Plus |
CG32425-RB | 1090 | CG32425-RB | 85..822 | 17..754 | 3690 | 100 | Plus |
CG32425-RA | 2813 | CG32425-RA | 113..839 | 17..743 | 3635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 13:11:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20510053..20510790 | 17..754 | 3690 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 13:11:36 has no hits.
BO15986.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 06:57:42 Download gff for
BO15986.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-PB | 1..741 | 17..757 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 07:03:50 Download gff for
BO15986.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-PB | 1..741 | 17..757 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 04:07:56 Download gff for
BO15986.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-RB | 80..827 | 10..761 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:46:43 Download gff for
BO15986.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-RB | 80..827 | 10..761 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 17:46:43 Download gff for
BO15986.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20510048..20510795 | 10..761 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 04:07:56 Download gff for
BO15986.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20503148..20503895 | 10..761 | 99 | | Plus |
BO15986.complete Sequence
772 bp (772 high quality bases) assembled on 2006-08-24
GenBank Submission: FJ633655
> BO15986.complete
GAAGTTATCAGTCGACATGGAGGCCATGAAGAAATTGGACGCGGACCTGG
TGGCCCTTTTCGCCACTGCTGCCTCCGCCGAACCTCTTAAGATTAGGAAA
CAGCAGGAGGTCCTGTGGCCGGGAGCCGAGCCGGAGCAAACCGCCCAGGA
ATCGGAGGATGATGAGCTGGTGATGACGCCGGAGCTCTTCCGCAGCTGCA
ACGCCTTGCAGCTGCACTTGGAGGCACTGACATTGCAGCCGGAGGGAACC
CAACGCATGGAACTGGTTCAGAACGAAGTGCGACCCATTTTCACCGTGGA
GTGCCAGCTGTCGGGGGACTTGATCCGTAAAGTGCCGCGCCAACCGATGT
TCCACATCATGCAGTTCGAGTCGGAGAAGTTCCAGAGCCTGACGCAGTGC
ACCCGTTTCGGGCAGACGGCTCAGCGTCAGGTCGATATGGAAGATAAGAG
CCTGCAGGATCCGGAACAGAGTGCTGGCCATGTAGACATCACGGTTTGGT
GGCGCGAACCCGGCACCTGTCTCAACGAAATGCTCGGCATGGGCCGCCTG
GAGCTCAGGGAGCTCTACAGGGCATCCCTGTTGGAGCAGTGCAAGTGCAT
TGCCATTCGGCGACGCGACGTCCACCTGGGTAGCGTGTACTTGAAGATCA
GTCTGCTTCAGAATTTGAATGGTAGCCCGGAGCAGCCGCAGCAACAGCAG
CAGCAGCCGGGCCAAAAGAACGAAAGTGGAAACAAGGCAGCAGGTGAATA
TATAGCAAGCTTTCTAGACCAT
BO15986.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:41:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32425-RF | 1593 | CG32425-PF | 853..1590 | 17..754 | 3690 | 100 | Plus |
CG32425-RB | 741 | CG32425-PB | 1..738 | 17..754 | 3690 | 100 | Plus |
CG32425-RA | 2280 | CG32425-PA | 1..727 | 17..743 | 3635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:41:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32425-RF | 2171 | CG32425-RF | 1166..1903 | 17..754 | 3690 | 100 | Plus |
CG32425-RB | 1090 | CG32425-RB | 85..822 | 17..754 | 3690 | 100 | Plus |
CG32425-RA | 2813 | CG32425-RA | 113..839 | 17..743 | 3635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:41:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20510053..20510790 | 17..754 | 3690 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:41:44 has no hits.
BO15986.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 21:51:32 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:07:07 Download gff for
BO15986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-RF | 1079..1826 | 10..761 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:49:37 Download gff for
BO15986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-RB | 85..822 | 17..756 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:51:33 Download gff for
BO15986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-RF | 1079..1826 | 10..761 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:16:54 Download gff for
BO15986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-RB | 85..822 | 17..756 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:16:54 Download gff for
BO15986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20510053..20510790 | 17..756 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:49:37 Download gff for
BO15986.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20503153..20503890 | 17..756 | 99 | | Plus |
BO15986.pep Sequence
Translation from 16 to 772
> BO15986.pep
MEAMKKLDADLVALFATAASAEPLKIRKQQEVLWPGAEPEQTAQESEDDE
LVMTPELFRSCNALQLHLEALTLQPEGTQRMELVQNEVRPIFTVECQLSG
DLIRKVPRQPMFHIMQFESEKFQSLTQCTRFGQTAQRQVDMEDKSLQDPE
QSAGHVDITVWWREPGTCLNEMLGMGRLELRELYRASLLEQCKCIAIRRR
DVHLGSVYLKISLLQNLNGSPEQPQQQQQQPGQKNESGNKAAGEYIASFL
DH
BO15986.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:03:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32425-PB | 246 | CG32425-PB | 1..246 | 1..246 | 1273 | 100 | Plus |
CG32425-PF | 530 | CG32425-PF | 285..530 | 1..246 | 1273 | 100 | Plus |
CG32425-PA | 759 | CG32425-PA | 1..242 | 1..242 | 1251 | 100 | Plus |
CG32425-PE | 759 | CG32425-PE | 1..242 | 1..242 | 1251 | 100 | Plus |