Clone Sequence Records
BO16009.5prime Sequence
263 bp (263 high quality bases) assembled on 2006-06-16
> BO16009.5prime
GAAGTTATCAGTCGACATGCCTGTTTTGGAGCACATCAAAGCCATGGCAG
AGACTCCGACTCCAGCTGAGAACAGCCCTGCACCGGCAGACGAGAATGCT
CCGCCCCAGGCAGTCCGGGAACTGACGCAGACCGACCATCTCAACCGACG
CCTTCTCAAATCGCTCCTGGAAAACATGCAGGCCACCGAGGTTCTGGCGC
AGGAGAACGGGAACGGCTCCAACGAGGAGGACAACGATTTCGAAGAAGCA
AGCTTTCTAGACC
BO16009.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 15:23:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13751-PA | 234 | CG13751-RA | 1..231 | 17..247 | 1155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:27:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13751-RA | 377 | CG13751-RA | 102..332 | 17..247 | 1155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:26:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8900342..8900572 | 17..247 | 1155 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:27:00 has no hits.
BO16009.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:43:35 Download gff for
BO16009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13751-PA | 1..234 | 17..251 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:48:26 Download gff for
BO16009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13751-RA | 102..341 | 17..256 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:55:09 Download gff for
BO16009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13751-RA | 102..341 | 17..256 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:55:09 Download gff for
BO16009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8900342..8900581 | 17..256 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:48:26 Download gff for
BO16009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4787847..4788086 | 17..256 | 98 | | Plus |
BO16009.complete Sequence
265 bp assembled on 2008-08-15
GenBank Submission: FJ633664
> BO16009.complete
GAAGTTATCAGTCGACATGCCTGTTTTGGAGCACATCAAAGCCATGGCAG
AGACTCCGACTCCAGCTGAGAACAGCCCTGCACCGGCAGACGAGAATGCT
CCGCCCCAGGCAGTCCGGGAACTGACGCAGACCGACCATCTCAACCGACG
CCTTCTCAAATCGCTCCTGGAAAACATGCAGGCCACCGAGGTTCTGGCGC
AGGAGAACGGGAACGGCTCCAACGAGGAGGACAACGATTTCGAAGAAGCA
AGCTTTCTAGACCAT
BO16009.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:39:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13751-RA | 234 | CG13751-PA | 1..231 | 17..247 | 1155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:39:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13751-RA | 377 | CG13751-RA | 102..332 | 17..247 | 1155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:39:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8900342..8900572 | 17..247 | 1155 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 23:39:00 has no hits.
BO16009.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:43:47 Download gff for
BO16009.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13751-RA | 102..341 | 17..256 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:34:30 Download gff for
BO16009.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13751-RA | 102..332 | 17..249 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:06:53 Download gff for
BO16009.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13751-RA | 102..332 | 17..249 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:05:24 Download gff for
BO16009.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13751-RA | 102..332 | 17..249 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:05:24 Download gff for
BO16009.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8900342..8900572 | 17..249 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:34:30 Download gff for
BO16009.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4787847..4788077 | 17..249 | 99 | | Plus |
BO16009.pep Sequence
Translation from 16 to 265
> BO16009.pep
MPVLEHIKAMAETPTPAENSPAPADENAPPQAVRELTQTDHLNRRLLKSL
LENMQATEVLAQENGNGSNEEDNDFEEASFLDH
BO16009.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:33:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13751-PA | 77 | CG13751-PA | 1..77 | 1..77 | 396 | 100 | Plus |
