Clone BO16032 Report

Search the DGRC for BO16032

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:160
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG14818-RA
Protein status:BO16032.pep: Imported from assembly
Sequenced Size:322

Clone Sequence Records

BO16032.3prime Sequence

320 bp (320 high quality bases) assembled on 2006-06-16

> BO16032.3prime
ATGGTCTAGAAAGCTTGCCTTGGGTGCCGCTTCGCTGCCCGCCTGCCCGT
CCATGTTGTCATCTCCCGATTCGGGAGCGTTGTCATTTTCCTCGGCAATC
AGGCGACGGATCTCTCGGTTGGAGTTCAGCAGCTCCCGTAGTTGGGACAT
AATGTCGTCTGTGCGCTGCTCCACGGCGTCCAGGGCACAGCTGAGAGCGT
CCAGACTGTTGTTCACGTCCTCCATCTCTTGGAGGTCCGCCTCCTGGACA
TTGGTGTTGCCAGAGTCGCCGGACGACGAGGGATCATGATTGTTTTTGGG
TGACATGTCGACTGATAACT

BO16032.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 15:25:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG14818-PA 291 CG14818-RA 1..288 306..19 1440 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:31:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG14818-RB 598 CG14818-RB 188..475 306..19 1440 100 Minus
CG14818-RA 501 CG14818-RA 91..378 306..19 1440 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:31:44
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1879142..1879352 19..229 1055 100 Plus
X 23542271 X 1879412..1879490 228..306 395 100 Plus
Blast to na_te.dros performed on 2015-02-12 10:31:46 has no hits.

BO16032.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:43:56 Download gff for BO16032.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14818-PA 1..291 18..306 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:34:40 Download gff for BO16032.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14818-RA 83..378 19..314 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:15:54 Download gff for BO16032.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14818-RA 83..378 19..314 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:15:54 Download gff for BO16032.3prime
Subject Subject Range Query Range Percent Splice Strand
X 1879412..1879498 228..314 95   Plus
X 1879142..1879350 19..227 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:34:40 Download gff for BO16032.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 1773175..1773383 19..227 100 <- Plus
arm_X 1773445..1773531 228..314 95   Plus

BO16032.5prime Sequence

320 bp (320 high quality bases) assembled on 2006-06-16

> BO16032.5prime
GAAGTTATCAGTCGACATGTCACCCAAAAACAATCATGATCCCTCGTCGT
CCGGCGACTCTGGCAACACCAATGTCCAGGAGGCGGACCTCCAAGAGATG
GAGGACGTGAACAACAGTCTGGACGCTCTCAGCTGTGCCCTGGACGCCGT
GGAGCAGCGCACAGACGACATTATGTCCCAACTACGGGAGCTGCTGAACT
CCAACCGAGAGATCCGTCGCCTGATTGCCGAGGAAAATGACAACGCTCCC
GAATCGGGAGATGACAACATGGACGGGCAGGCGGGCAGCGAAGCGGCACC
CAAGGCAAGCTTTCTAGACC

BO16032.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 15:25:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG14818-PA 291 CG14818-RA 1..288 17..304 1440 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 08:17:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG14818-RB 598 CG14818-RB 188..475 17..304 1440 100 Plus
CG14818-RA 501 CG14818-RA 91..378 17..304 1440 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 08:17:20
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1879142..1879352 304..94 1055 100 Minus
X 23542271 X 1879412..1879490 95..17 395 100 Minus
Blast to na_te.dros performed on 2015-02-11 08:17:21 has no hits.

BO16032.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:43:57 Download gff for BO16032.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14818-PA 1..291 17..305 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 14:52:27 Download gff for BO16032.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14818-RA 83..378 9..304 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:42:16 Download gff for BO16032.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14818-RA 83..378 9..304 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:42:16 Download gff for BO16032.5prime
Subject Subject Range Query Range Percent Splice Strand
X 1879142..1879350 96..304 100 <- Minus
X 1879412..1879498 9..95 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 14:52:27 Download gff for BO16032.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 1773175..1773383 96..304 100 <- Minus
arm_X 1773445..1773531 9..95 95   Minus

BO16032.complete Sequence

322 bp assembled on 2008-08-15

GenBank Submission: FJ633677

> BO16032.complete
GAAGTTATCAGTCGACATGTCACCCAAAAACAATCATGATCCCTCGTCGT
CCGGCGACTCTGGCAACACCAATGTCCAGGAGGCGGACCTCCAAGAGATG
GAGGACGTGAACAACAGTCTGGACGCTCTCAGCTGTGCCCTGGACGCCGT
GGAGCAGCGCACAGACGACATTATGTCCCAACTACGGGAGCTGCTGAACT
CCAACCGAGAGATCCGTCGCCTGATTGCCGAGGAAAATGACAACGCTCCC
GAATCGGGAGATGACAACATGGACGGGCAGGCGGGCAGCGAAGCGGCACC
CAAGGCAAGCTTTCTAGACCAT

BO16032.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:14:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG14818-RB 291 CG14818-PB 1..288 17..304 1440 100 Plus
CG14818-RA 291 CG14818-PA 1..288 17..304 1440 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:14:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG14818-RB 598 CG14818-RB 188..475 17..304 1440 100 Plus
CG14818-RA 501 CG14818-RA 91..378 17..304 1440 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:14:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1879142..1879352 304..94 1055 100 Minus
X 23542271 X 1879412..1879490 95..17 395 100 Minus
Blast to na_te.dros performed on 2014-11-27 13:14:42 has no hits.

BO16032.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:45:27 Download gff for BO16032.complete
Subject Subject Range Query Range Percent Splice Strand
CG14818-RA 85..380 9..304 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:13:21 Download gff for BO16032.complete
Subject Subject Range Query Range Percent Splice Strand
CG14818-RA 91..378 17..306 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:11:29 Download gff for BO16032.complete
Subject Subject Range Query Range Percent Splice Strand
CG14818-RA 93..380 17..306 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:14:02 Download gff for BO16032.complete
Subject Subject Range Query Range Percent Splice Strand
CG14818-RA 91..378 17..306 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:14:02 Download gff for BO16032.complete
Subject Subject Range Query Range Percent Splice Strand
X 1879140..1879350 96..306 99 <- Minus
X 1879412..1879490 17..95 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:13:21 Download gff for BO16032.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1773173..1773383 96..306 99 <- Minus
arm_X 1773445..1773523 17..95 100   Minus

BO16032.pep Sequence

Translation from 16 to 322

> BO16032.pep
MSPKNNHDPSSSGDSGNTNVQEADLQEMEDVNNSLDALSCALDAVEQRTD
DIMSQLRELLNSNREIRRLIAEENDNAPESGDDNMDGQAGSEAAPKASFL
DH

BO16032.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:28:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG14818-PB 96 CG14818-PB 1..96 1..96 489 100 Plus
CG14818-PA 96 CG14818-PA 1..96 1..96 489 100 Plus