Clone Sequence Records
BO16044.3prime Sequence
290 bp (290 high quality bases) assembled on 2006-06-16
> BO16044.3prime
ATGGTCTAGAAAGCTTGCTCGGTTGTCATCGGGAGTCATCATCCGGCGAC
CGCAGAGCCGACTCGAGTTCCAAATATACCGGAGAACCAGAGCAACTGAA
CACCTGAGCATCTGAAACATCTGAAACATCTGAGTCCCCGGAATCAGCAG
GCGGAGGACAAGAAAACGGGGCAGCAACAATAACAATCGCGACTCAACTA
CGCACCGATTGACGCCCGCCCCCCGTCCTTGCCACCTACTCCCACCCCCG
CCCCCCATCCACTCCACGAGCACCATGTCGACTGATAACT
BO16044.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-09 15:27:28 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:16:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14435-RC | 3831 | CG14435-RC | 298..555 | 19..276 | 1290 | 100 | Plus |
CG14435-RA | 2573 | CG14435-RA | 298..555 | 19..276 | 1290 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:16:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6843367..6843624 | 276..19 | 1290 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:16:05 has no hits.
BO16044.3prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 16:59:36 Download gff for
BO16044.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14435-RA | 293..559 | 12..283 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:02:05 Download gff for
BO16044.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14435-RA | 293..559 | 12..283 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:02:05 Download gff for
BO16044.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6843363..6843629 | 12..283 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 16:59:36 Download gff for
BO16044.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6737396..6737662 | 12..283 | 97 | | Minus |
BO16044.5prime Sequence
290 bp (290 high quality bases) assembled on 2006-06-16
> BO16044.5prime
GAAGTTATCAGTCGACATGGTGCTCGTGGAGTGGATGGGGGGCGGGGGTG
GGAGTAGGTGGCAAGGACGGGGGGCGGGCGTCAATCGGTGCGTAGTTGAG
TCGCGATTGTTATTGTTGCTGCCCCGTTTTCTTGTCCTCCGCCTGCTGAT
TCCGGGGACTCAGATGTTTCAGATGTTTCAGATGCTCAGGTGTTCAGTTG
CTCTGGTTCTCCGGTATATTTGGAACTCGAGTCGGCTCTGCGGTCGCCGG
ATGATGACTCCCGATGACAACCGAGCAAGCTTTCTAGACC
BO16044.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-09 15:27:33 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:16:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14435-RC | 3831 | CG14435-RC | 298..555 | 274..17 | 1290 | 100 | Minus |
CG14435-RA | 2573 | CG14435-RA | 298..555 | 274..17 | 1290 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:16:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6843367..6843624 | 17..274 | 1290 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 17:16:46 has no hits.
BO16044.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 16:59:44 Download gff for
BO16044.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14435-RA | 293..559 | 10..281 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:02:11 Download gff for
BO16044.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14435-RA | 293..559 | 10..281 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:02:11 Download gff for
BO16044.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6843363..6843629 | 10..281 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 16:59:44 Download gff for
BO16044.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6737396..6737662 | 10..281 | 97 | | Plus |
BO16044.complete Sequence
292 bp assembled on 2008-08-15
> BO16044.complete
GAAGTTATCAGTCGACATGGTGCTCGTGGAGTGGATGGGGGGCGGGGGTG
GGAGTAGGTGGCAAGGACGGGGGGCGGGCGTCAATCGGTGCGTAGTTGAG
TCGCGATTGTTATTGTTGCTGCCCCGTTTTCTTGTCCTCCGCCTGCTGAT
TCCGGGGACTCAGATGTTTCAGATGTTTCAGATGCTCAGGTGTTCAGTTG
CTCTGGTTCTCCGGTATATTTGGAACTCGAGTCGGCTCTGCGGTCGCCGG
ATGATGACTCCCGATGACAACCGAGCAAGCTTTCTAGACCAT
BO16044.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-26 22:25:35 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:25:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14435-RC | 3831 | CG14435-RC | 298..555 | 274..17 | 1290 | 100 | Minus |
CG14435-RA | 2573 | CG14435-RA | 298..555 | 274..17 | 1290 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:25:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6843367..6843624 | 17..274 | 1290 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:25:35 has no hits.
BO16044.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:45:57 Download gff for
BO16044.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14435-RA | 292..558 | 10..281 | 97 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:57:35 Download gff for
BO16044.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14435-RA | 294..555 | 17..276 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:01:14 Download gff for
BO16044.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14435-RA | 37..298 | 17..276 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:00:37 Download gff for
BO16044.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14435-RA | 294..555 | 17..276 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:00:37 Download gff for
BO16044.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6843367..6843624 | 17..276 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:57:35 Download gff for
BO16044.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6737400..6737657 | 17..276 | 99 | | Plus |
BO16044.pep Sequence
Translation from 16 to 292
> BO16044.pep
MVLVEWMGGGGGSRWQGRGAGVNRCVVESRLLLLLPRFLVLRLLIPGTQM
FQMFQMLRCSVALVLRYIWNSSRLCGRRMMTPDDNRASFLDH
Sequence BO16044.pep has no blast hits.