Clone BO16044 Report

Search the DGRC for BO16044

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:160
Well:44
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO16044.pep: Imported from assembly
Sequenced Size:292

Clone Sequence Records

BO16044.3prime Sequence

290 bp (290 high quality bases) assembled on 2006-06-16

> BO16044.3prime
ATGGTCTAGAAAGCTTGCTCGGTTGTCATCGGGAGTCATCATCCGGCGAC
CGCAGAGCCGACTCGAGTTCCAAATATACCGGAGAACCAGAGCAACTGAA
CACCTGAGCATCTGAAACATCTGAAACATCTGAGTCCCCGGAATCAGCAG
GCGGAGGACAAGAAAACGGGGCAGCAACAATAACAATCGCGACTCAACTA
CGCACCGATTGACGCCCGCCCCCCGTCCTTGCCACCTACTCCCACCCCCG
CCCCCCATCCACTCCACGAGCACCATGTCGACTGATAACT

BO16044.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-09 15:27:28 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:16:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG14435-RC 3831 CG14435-RC 298..555 19..276 1290 100 Plus
CG14435-RA 2573 CG14435-RA 298..555 19..276 1290 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:16:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6843367..6843624 276..19 1290 100 Minus
Blast to na_te.dros performed on 2015-02-10 17:16:05 has no hits.

BO16044.3prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 16:59:36 Download gff for BO16044.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14435-RA 293..559 12..283 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:02:05 Download gff for BO16044.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14435-RA 293..559 12..283 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:02:05 Download gff for BO16044.3prime
Subject Subject Range Query Range Percent Splice Strand
X 6843363..6843629 12..283 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 16:59:36 Download gff for BO16044.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 6737396..6737662 12..283 97   Minus

BO16044.5prime Sequence

290 bp (290 high quality bases) assembled on 2006-06-16

> BO16044.5prime
GAAGTTATCAGTCGACATGGTGCTCGTGGAGTGGATGGGGGGCGGGGGTG
GGAGTAGGTGGCAAGGACGGGGGGCGGGCGTCAATCGGTGCGTAGTTGAG
TCGCGATTGTTATTGTTGCTGCCCCGTTTTCTTGTCCTCCGCCTGCTGAT
TCCGGGGACTCAGATGTTTCAGATGTTTCAGATGCTCAGGTGTTCAGTTG
CTCTGGTTCTCCGGTATATTTGGAACTCGAGTCGGCTCTGCGGTCGCCGG
ATGATGACTCCCGATGACAACCGAGCAAGCTTTCTAGACC

BO16044.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-09 15:27:33 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:16:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG14435-RC 3831 CG14435-RC 298..555 274..17 1290 100 Minus
CG14435-RA 2573 CG14435-RA 298..555 274..17 1290 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:16:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6843367..6843624 17..274 1290 100 Plus
Blast to na_te.dros performed on 2015-02-10 17:16:46 has no hits.

BO16044.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 16:59:44 Download gff for BO16044.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14435-RA 293..559 10..281 97   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:02:11 Download gff for BO16044.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14435-RA 293..559 10..281 97   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:02:11 Download gff for BO16044.5prime
Subject Subject Range Query Range Percent Splice Strand
X 6843363..6843629 10..281 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 16:59:44 Download gff for BO16044.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 6737396..6737662 10..281 97   Plus

BO16044.complete Sequence

292 bp assembled on 2008-08-15

> BO16044.complete
GAAGTTATCAGTCGACATGGTGCTCGTGGAGTGGATGGGGGGCGGGGGTG
GGAGTAGGTGGCAAGGACGGGGGGCGGGCGTCAATCGGTGCGTAGTTGAG
TCGCGATTGTTATTGTTGCTGCCCCGTTTTCTTGTCCTCCGCCTGCTGAT
TCCGGGGACTCAGATGTTTCAGATGTTTCAGATGCTCAGGTGTTCAGTTG
CTCTGGTTCTCCGGTATATTTGGAACTCGAGTCGGCTCTGCGGTCGCCGG
ATGATGACTCCCGATGACAACCGAGCAAGCTTTCTAGACCAT

BO16044.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-26 22:25:35 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:25:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG14435-RC 3831 CG14435-RC 298..555 274..17 1290 100 Minus
CG14435-RA 2573 CG14435-RA 298..555 274..17 1290 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:25:34
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6843367..6843624 17..274 1290 100 Plus
Blast to na_te.dros performed on 2014-11-26 22:25:35 has no hits.

BO16044.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:45:57 Download gff for BO16044.complete
Subject Subject Range Query Range Percent Splice Strand
CG14435-RA 292..558 10..281 97   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:57:35 Download gff for BO16044.complete
Subject Subject Range Query Range Percent Splice Strand
CG14435-RA 294..555 17..276 99   Minus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:01:14 Download gff for BO16044.complete
Subject Subject Range Query Range Percent Splice Strand
CG14435-RA 37..298 17..276 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:00:37 Download gff for BO16044.complete
Subject Subject Range Query Range Percent Splice Strand
CG14435-RA 294..555 17..276 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:00:37 Download gff for BO16044.complete
Subject Subject Range Query Range Percent Splice Strand
X 6843367..6843624 17..276 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:57:35 Download gff for BO16044.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6737400..6737657 17..276 99   Plus

BO16044.pep Sequence

Translation from 16 to 292

> BO16044.pep
MVLVEWMGGGGGSRWQGRGAGVNRCVVESRLLLLLPRFLVLRLLIPGTQM
FQMFQMLRCSVALVLRYIWNSSRLCGRRMMTPDDNRASFLDH
Sequence BO16044.pep has no blast hits.