Clone Sequence Records
BO16045.3prime Sequence
296 bp (296 high quality bases) assembled on 2006-06-16
> BO16045.3prime
ATGGTCTAGAAAGCTTGCAAAGAGCTTAGTAGCATATAGCCATTTGAAAG
GAATTTTAATCCGGTCAAATGTGCAGTGAAGTGGCCAAATTGCATCCATT
GCGATCCAGAGTGAACCTTGGACACGTATAAATCGCATGCGTGGCATGGG
CCGTTTGCCATTCAGGTTTGCACTGCCCGTTTTGGGTCGTTGTCTCCCGG
CCTTTGGTGCGTGATGGATGATTGATGTGCTGCCTGGGCAAGGCAATCCG
ATGTGAATCGAAACTGCAACTAAACTACACATGTCGACTGATAACT
BO16045.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 15:27:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32102-PA | 267 | CG32102-RA | 1..264 | 282..19 | 1320 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:44:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32102-RA | 544 | CG32102-RA | 192..456 | 283..19 | 1325 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:44:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12469160..12469424 | 19..283 | 1325 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 22:44:37 has no hits.
BO16045.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:44:10 Download gff for
BO16045.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-PA | 1..267 | 15..282 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:13:21 Download gff for
BO16045.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-RA | 185..462 | 11..292 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:08:52 Download gff for
BO16045.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-RA | 185..462 | 11..292 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:08:52 Download gff for
BO16045.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12469154..12469431 | 11..292 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:13:21 Download gff for
BO16045.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12462254..12462531 | 11..292 | 97 | | Plus |
BO16045.5prime Sequence
296 bp (296 high quality bases) assembled on 2006-06-16
> BO16045.5prime
GAAGTTATCAGTCGACATGTGTAGTTTAGTTGCAGTTTCGATTCACATCG
GATTGCCTTGCCCAGGCAGCACATCAATCATCCATCACGCACCAAAGGCC
GGGAGACAACGACCCAAAACGGGCAGTGCAAACCTGAATGGCAAACGGCC
CATGCCACGCATGCGATTTATACGTGTCCAAGGTTCACTCTGGATCGCAA
TGGATGCAATTTGGCCACTTCACTGCACATTTGACCGGATTAAAATTCCT
TTCAAATGGCTATATGCTACTAAGCTCTTTGCAAGCTTTCTAGACC
BO16045.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 15:27:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32102-PA | 267 | CG32102-RA | 1..264 | 17..280 | 1320 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 22:45:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32102-RA | 544 | CG32102-RA | 192..456 | 16..280 | 1325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 22:45:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12469160..12469424 | 280..16 | 1325 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 22:45:18 has no hits.
BO16045.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:44:10 Download gff for
BO16045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-PA | 1..267 | 17..284 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 18:13:25 Download gff for
BO16045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-RA | 185..462 | 7..288 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 00:10:17 Download gff for
BO16045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-RA | 185..462 | 7..288 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 00:10:17 Download gff for
BO16045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12469154..12469431 | 7..288 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 18:13:25 Download gff for
BO16045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12462254..12462531 | 7..288 | 97 | | Minus |
BO16045.complete Sequence
298 bp assembled on 2008-08-15
GenBank Submission: FJ633685
> BO16045.complete
GAAGTTATCAGTCGACATGTGTAGTTTAGTTGCAGTTTCGATTCACATCG
GATTGCCTTGCCCAGGCAGCACATCAATCATCCATCACGCACCAAAGGCC
GGGAGACAACGACCCAAAACGGGCAGTGCAAACCTGAATGGCAAACGGCC
CATGCCACGCATGCGATTTATACGTGTCCAAGGTTCACTCTGGATCGCAA
TGGATGCAATTTGGCCACTTCACTGCACATTTGACCGGATTAAAATTCCT
TTCAAATGGCTATATGCTACTAAGCTCTTTGCAAGCTTTCTAGACCAT
BO16045.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:27:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32102-RA | 267 | CG32102-PA | 1..264 | 17..280 | 1320 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:27:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32102-RA | 544 | CG32102-RA | 192..456 | 16..280 | 1325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:27:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12469160..12469424 | 280..16 | 1325 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:27:37 has no hits.
BO16045.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:47:15 Download gff for
BO16045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-RA | 185..462 | 7..288 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:38:58 Download gff for
BO16045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-RA | 193..456 | 17..282 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:11:00 Download gff for
BO16045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-RA | 193..456 | 17..282 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:22:26 Download gff for
BO16045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32102-RA | 193..456 | 17..282 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:22:26 Download gff for
BO16045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12469158..12469423 | 17..282 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:38:58 Download gff for
BO16045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12462258..12462523 | 17..282 | 99 | | Minus |
BO16045.pep Sequence
Translation from 16 to 298
> BO16045.pep
MCSLVAVSIHIGLPCPGSTSIIHHAPKAGRQRPKTGSANLNGKRPMPRMR
FIRVQGSLWIAMDAIWPLHCTFDRIKIPFKWLYATKLFASFLDH
BO16045.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:31:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32102-PA | 88 | CG32102-PA | 1..88 | 1..88 | 482 | 100 | Plus |
