Clone Sequence Records
BO16052.complete Sequence
328 bp assembled on 2008-11-10
GenBank Submission: KX794261
> BO16052.complete
GAAGTTATCAGTCGACATGATTTTGGAGGAACTGGCTCGTACGCATCCAG
ATGGAAGGCGTGACTATATATATTATCTTGCGTTTGGTAATGCTCGTATC
AAGGAGTATACGTCTGGCTTAAAATACTGCCGAGCTTTTCTTGACATCGA
GTCAAATGATCAAGTTCGCTCCCTAGAGGAATATATTAAAAAAGAAATCG
ATAAGGAAGTGGCAAAGGGTATGGTGGTTGCAGGCGGAGCAGCTTTAGTA
CTTGGCGGAATATTAGGACTTGGCATTGCTATGGCTAGAAATAAACAAAA
ACGGGAGAAAGCAAGCTTTCTAGACCAT
BO16052.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:59:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fis1-RG | 297 | CG17510-PG | 1..294 | 17..310 | 1470 | 100 | Plus |
Fis1-RC | 465 | CG17510-PC | 169..462 | 17..310 | 1470 | 100 | Plus |
Fis1-RA | 297 | CG17510-PA | 1..294 | 17..310 | 1470 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:59:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fis1-RG | 557 | CG17510-RG | 108..401 | 17..310 | 1470 | 100 | Plus |
Fis1-RC | 698 | CG17510-RC | 249..542 | 17..310 | 1470 | 100 | Plus |
Fis1-RA | 630 | CG17510-RA | 181..474 | 17..310 | 1470 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:59:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 5604243..5604405 | 179..17 | 815 | 100 | Minus |
2R | 25286936 | 2R | 5603900..5604014 | 291..177 | 575 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 19:59:46 has no hits.
BO16052.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:17:06 Download gff for
BO16052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17510-RC | 243..536 | 17..310 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:01:52 Download gff for
BO16052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fis1-RA | 181..474 | 17..312 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:27:39 Download gff for
BO16052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17510-RC | 243..536 | 17..312 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:12:22 Download gff for
BO16052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fis1-RA | 181..474 | 17..312 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:12:22 Download gff for
BO16052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5603900..5604012 | 179..291 | 100 | <- | Minus |
2R | 5604244..5604405 | 17..178 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:01:52 Download gff for
BO16052.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 1491405..1491517 | 179..291 | 100 | <- | Minus |
arm_2R | 1491749..1491910 | 17..178 | 100 | | Minus |
BO16052.5prime Sequence
326 bp (326 high quality bases) assembled on 2006-06-16
> BO16052.5prime
GAAGTTATCAGTCGACATGATTTTGGAGGAACTGGCTCGTACGCATCCAG
ATGGAAGGCGTGACTATATATATTATCTTGCGTTTGGTAATGCTCGTATC
AAGGAGTATACGTCTGGCTTAAAATACTGCCGAGCTTTTCTTGACATCGA
GTCAAATGATCAAGTTCGCTCCCTAGAGGAATATATTAAAAAAGAAATCG
ATAAGGAAGTGGCAAAGGGTATGGTGGTTGCAGGCGGAGCAGCTTTAGTA
CTTGGCGGAATATTAGGACTTGGCATTGCTATGGCTAGAAATAAACAAAA
ACGGGAGAAAGCAAGCTTTCTAGACC
BO16052.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 15:28:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17510-PA | 297 | CG17510-RA | 1..294 | 17..310 | 1470 | 100 | Plus |
CG17510-PB | 279 | CG17510-RB | 1..275 | 17..291 | 1375 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 06:36:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fis1-RG | 557 | CG17510-RG | 108..401 | 17..310 | 1470 | 100 | Plus |
Fis1-RC | 698 | CG17510-RC | 249..542 | 17..310 | 1470 | 100 | Plus |
Fis1-RA | 630 | CG17510-RA | 181..474 | 17..310 | 1470 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 06:36:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 5604243..5604405 | 179..17 | 815 | 100 | Minus |
2R | 25286936 | 2R | 5603900..5604014 | 291..177 | 575 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-31 06:36:06 has no hits.
BO16052.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:44:18 Download gff for
BO16052.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17510-PA | 1..297 | 17..311 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 22:11:07 Download gff for
BO16052.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fis1-RA | 181..474 | 17..310 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 07:42:55 Download gff for
BO16052.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fis1-RA | 181..474 | 17..310 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 07:42:55 Download gff for
BO16052.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5603900..5604012 | 179..291 | 100 | <- | Minus |
2R | 5604244..5604405 | 17..178 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 22:11:07 Download gff for
BO16052.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 1491405..1491517 | 179..291 | 100 | <- | Minus |
arm_2R | 1491749..1491910 | 17..178 | 100 | | Minus |
BO16052.pep Sequence
Translation from 16 to 328
> BO16052.pep
MILEELARTHPDGRRDYIYYLAFGNARIKEYTSGLKYCRAFLDIESNDQV
RSLEEYIKKEIDKEVAKGMVVAGGAALVLGGILGLGIAMARNKQKREKAS
FLDH
BO16052.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:07:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fis1-PG | 98 | CG17510-PG | 1..98 | 1..98 | 495 | 100 | Plus |
Fis1-PA | 98 | CG17510-PA | 1..98 | 1..98 | 495 | 100 | Plus |
Fis1-PC | 154 | CG17510-PC | 57..154 | 1..98 | 495 | 100 | Plus |
Fis1-PF | 92 | CG17510-PF | 1..91 | 1..91 | 459 | 100 | Plus |
Fis1-PD | 92 | CG17510-PD | 1..91 | 1..91 | 459 | 100 | Plus |