Clone BO16092 Report

Search the DGRC for BO16092

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:160
Well:92
Vector:pDNR-Dual
Associated Gene/TranscriptCG14686-RA
Protein status:BO16092.pep: Imported from assembly
Sequenced Size:817

Clone Sequence Records

BO16092.complete Sequence

817 bp assembled on 2009-07-30

GenBank Submission: KX796155

> BO16092.complete
GAAGTTATCAGTCGACATGAACCGAAATTACATTGTCATACTGCAGCTGC
TGGGAGTGTTGGTTGTGCTGACCTACGCCAGTGCAATCCCCAAATACGAA
GATAGCCATAAGTTCTATGCGGATAAGGCGCAGCGGGATAGGTCGTACTT
TAATGAAAACAAGACCCAGCCTAGTGAACCGCAGACAGCTTCCACGAAGG
ATAGACTGGAACGACTGGGCTATACCACTGGCTACGGATCCCTAAATGGT
TATCCTGGCGGTACTGGACTATCCGCCTACAATCCCATAAAACTGGACCT
GGGTGGCGTTGTCTTAGGAACTCTTGTGGGCATAGGTGCCATTATACTGA
TTCCTAAGATTCTATCCGCCTTCCATGGTGGTTATGGAGGCTACGGCCGC
AGCGAGGACAGTGACCTAACACCACTGAGCAGCATGATCAATAAGATTGA
CGATGTTCTGGGCCAGAATAATATTGACTCGACGAGTTGCATGCAACGTG
CTGTGTGCGGTTATGTTCGCTCTACGGAGTATAATATGAAGATCGGTTCC
TCAGACCAGATGGACGAATTTATTCATATGCTAGCGGAAAATGCCCTGGT
GGATTACCTCCTCGATGGAACGGCTATTAAGGAGGCATTGGAGCATGGAA
AGCGAGCCAATGATCGAGCCTGTGAAGAGGTGTACTCCAATTGTCCGCTG
GACAGTAAATCAGCTACGGATATTCTAATGAAGCTGATGCCAAAGAAAAA
CCCACAAGGAAAAGGAAAATCATCTGGAATTTCCCGAGAAAAGAAGGTTG
CAAGCTTTCTAGACCAT

BO16092.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:26:51
Subject Length Description Subject Range Query Range Score Percent Strand
Desi-RA 786 CG14686-PA 1..783 17..799 3915 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:26:53
Subject Length Description Subject Range Query Range Score Percent Strand
Desi-RA 1005 CG14686-RA 124..906 17..799 3915 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:26:50
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10780516..10780726 589..799 1055 100 Plus
3R 32079331 3R 10780261..10780447 402..588 935 100 Plus
3R 32079331 3R 10780049..10780207 248..406 780 99.4 Plus
3R 32079331 3R 10779838..10779974 112..248 685 100 Plus
3R 32079331 3R 10779692..10779788 17..113 485 100 Plus
Blast to na_te.dros performed on 2014-11-28 01:26:51 has no hits.

BO16092.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-31 08:53:34 Download gff for BO16092.complete
Subject Subject Range Query Range Percent Splice Strand
CG14686-RA 118..900 17..801 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:47:52 Download gff for BO16092.complete
Subject Subject Range Query Range Percent Splice Strand
Desi-RA 124..906 17..801 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:48:48 Download gff for BO16092.complete
Subject Subject Range Query Range Percent Splice Strand
Desi-RA 124..906 17..801 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:48:48 Download gff for BO16092.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10779692..10779786 17..111 100 -> Plus
3R 10779838..10779973 112..247 100 -> Plus
3R 10780049..10780202 248..401 100 -> Plus
3R 10780261..10780447 402..588 100 -> Plus
3R 10780516..10780726 589..801 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:47:52 Download gff for BO16092.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6605771..6605924 248..401 100 -> Plus
arm_3R 6605983..6606169 402..588 100 -> Plus
arm_3R 6606238..6606448 589..801 99   Plus
arm_3R 6605414..6605508 17..111 100 -> Plus
arm_3R 6605560..6605695 112..247 100 -> Plus

BO16092.3prime Sequence

708 bp (690 high quality bases) assembled on 2006-06-16

> BO16092.3prime
ATGGTCTAGAAAGCTTGCAACCTTCTTTTCTCGGGAAATTCCAGATGATT
TTCCTTTTCCTTGTGGGTTTTTCTTTGGCATCAGCTTCATTAGAATATCC
GTAGCTGATTTACTGTCCAGCGGACAATTGGAGTACACCTCTTCACAGGC
TCGATCATTGGCTCGCTTTCCATGCTCCAATGCCTCCTTAATAGCCGTTC
CATCGAGGAGGTAATCCACCAGGGCATTTTCCGCTAGCATATGAATAAAT
TCGTCCATCTGGTCTGAGGAACCGATCTTCATATTATACTCCGTAGAGCG
AACATAACCGCACACAGCACGTTGCATGCAACTCGTCGAGTCAATATTAT
TCTGGCCCAGAACATCGTCAATCTTATTGATCATGCTGCTCAGTGGTGTT
AGGTCACTGTCCTCGCTGCGGCCGTAGCCTCCATAACCACCATGGAAGGC
GGATAGAATCTTAGGAATCAGTATAATGGCACCTATGCCCACAAGAGTTC
CTAAGACAACGCCACCCAGGTCCAGTTTTATGGGATTGTAGGCGGATAGT
CCAGTACCGCCAGGATAACCATTTAGGGATCCGTAGCCAGTGGTATAGCC
CAGTCGTTCCAGTCTATCCTTCGTGGAAGCTGTCTGCGGTTCACTAGGCT
GGGTCTTGTTTTCATTAAAGTACGACCTATCCCGCTGCGCCTTATCCGCA
TAGAACTT

BO16092.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 15:35:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG14686-PA 786 CG14686-RA 94..783 708..19 3450 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:40:28
Subject Length Description Subject Range Query Range Score Percent Strand
Desi-RA 1005 CG14686-RA 217..906 708..19 3450 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:40:26
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10780516..10780726 229..19 1055 100 Minus
3R 32079331 3R 10780261..10780447 416..230 935 100 Minus
3R 32079331 3R 10780049..10780207 570..412 780 99.4 Minus
3R 32079331 3R 10779838..10779974 706..570 685 100 Minus
Blast to na_te.dros performed on 2015-02-10 18:40:27 has no hits.

BO16092.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:45:11 Download gff for BO16092.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14686-PA 94..786 18..708 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:51:17 Download gff for BO16092.3prime
Subject Subject Range Query Range Percent Splice Strand
Desi-RA 217..911 11..708 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:59:00 Download gff for BO16092.3prime
Subject Subject Range Query Range Percent Splice Strand
Desi-RA 217..911 11..708 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:59:00 Download gff for BO16092.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 10779836..10779973 571..708 99 -> Minus
3R 10780049..10780202 417..570 100 -> Minus
3R 10780261..10780447 230..416 100 -> Minus
3R 10780516..10780731 11..229 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:51:17 Download gff for BO16092.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6605558..6605695 571..708 99 -> Minus
arm_3R 6605771..6605924 417..570 100 -> Minus
arm_3R 6605983..6606169 230..416 100 -> Minus
arm_3R 6606238..6606453 11..229 98   Minus

BO16092.pep Sequence

Translation from 16 to 817

> BO16092.pep
MNRNYIVILQLLGVLVVLTYASAIPKYEDSHKFYADKAQRDRSYFNENKT
QPSEPQTASTKDRLERLGYTTGYGSLNGYPGGTGLSAYNPIKLDLGGVVL
GTLVGIGAIILIPKILSAFHGGYGGYGRSEDSDLTPLSSMINKIDDVLGQ
NNIDSTSCMQRAVCGYVRSTEYNMKIGSSDQMDEFIHMLAENALVDYLLD
GTAIKEALEHGKRANDRACEEVYSNCPLDSKSATDILMKLMPKKNPQGKG
KSSGISREKKVASFLDH

BO16092.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:29:35
Subject Length Description Subject Range Query Range Score Percent Strand
Desi-PA 261 CG14686-PA 1..261 1..261 1349 100 Plus