Clone Sequence Records
BO16225.3prime Sequence
362 bp (362 high quality bases) assembled on 2006-10-13
> BO16225.3prime
ATGGTCTAGAAAGCTTGCATTGAGTTCTTCTTCCTTCCCAAAGGATCCTT
CGTCCTTATCAGCCCCCTCGAGTTCCCGCTTGATCGGATTACCGATTCGT
ACATTGATGATCCTTTGCTTGTCCTTGCGGCTATGTCCCTTTAATGACTT
AACAGTGAAGCCGAGGACAACGCAAGCCACAGTGGCCACGCCCACGCACA
TCAGAGCCTTGTGGGCGGGGCGCAGATTGCCCAGATTATTGCCCAAGTTC
TCCAGGCTGCCCAATCGTCCCAATCCTTTGGGCGCAACTTTAGGCAGAAG
TGCCAGCTGATCCGTCAAGTTGGACAGAAACTTTGAGTAGTCCGACATGT
CGACTGATAACT
BO16225.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:05:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13021-PA | 333 | CG13021-RA | 1..330 | 348..19 | 1650 | 100 | Minus |
CG13021-PB | 333 | CG13021-RB | 1..330 | 348..19 | 1650 | 100 | Minus |
CG13021-PC | 333 | CG13021-RC | 1..330 | 348..19 | 1650 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 12:06:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13021-RB | 611 | CG13021-RB | 114..443 | 348..19 | 1650 | 100 | Minus |
CG13021-RA | 597 | CG13021-RA | 100..429 | 348..19 | 1650 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 12:06:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 3515260..3515589 | 348..19 | 1650 | 100 | Minus |
Blast to na_te.dros performed 2015-02-08 12:06:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
diver2 | 4917 | diver2 DIVER2 4917bp | 2659..2709 | 345..297 | 105 | 72.5 | Minus |
BO16225.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:46:40 Download gff for
BO16225.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-PC | 1..333 | 16..348 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:39:48 Download gff for
BO16225.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-RA | 93..429 | 19..354 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:44:32 Download gff for
BO16225.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-RA | 93..429 | 19..354 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:44:32 Download gff for
BO16225.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 3515253..3515589 | 19..354 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:39:48 Download gff for
BO16225.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 3409286..3409622 | 19..354 | 99 | | Minus |
BO16225.5prime Sequence
362 bp (362 high quality bases) assembled on 2006-10-13
> BO16225.5prime
GAAGTTATCAGTCGACATGTCGGACTACTCAAAGTTTCTGTCCAACTTGA
CGGATCAGCTGGCACTTCTGCCTAAAGTTGCGCCCAAAGGATTGGGACGA
TTGGGCAGCCTGGAGAACTTGGGCAATAATCTGGGCAATCTGCGCCCCGC
CCACAAGGCTCTGATGTGCGTGGGCGTGGCCACTGTGGCTTGCGTTGTCC
TCGGCTTCACTGTTAAGTCATTAAAGGGACATAGCCGCAAGGACAAGCAA
AGGATCATCAATGTACGAATCGGTAATCCGATCAAGCGGGAACTCGAGGG
GGCTGATAAGGACGAAGGATCCTTTGGGAAGGAAGAAGAACTCAATGCAA
GCTTTCTAGACC
BO16225.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:05:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13021-PA | 333 | CG13021-RA | 1..330 | 17..346 | 1650 | 100 | Plus |
CG13021-PB | 333 | CG13021-RB | 1..330 | 17..346 | 1650 | 100 | Plus |
CG13021-PC | 333 | CG13021-RC | 1..330 | 17..346 | 1650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:11:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13021-RB | 611 | CG13021-RB | 114..443 | 17..346 | 1650 | 100 | Plus |
CG13021-RA | 597 | CG13021-RA | 100..429 | 17..346 | 1650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:11:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 3515260..3515589 | 17..346 | 1650 | 100 | Plus |
Blast to na_te.dros performed 2015-02-11 09:11:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
diver2 | 4917 | diver2 DIVER2 4917bp | 2659..2709 | 20..68 | 105 | 72.5 | Plus |
BO16225.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:46:41 Download gff for
BO16225.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-PC | 1..333 | 17..349 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 17:03:06 Download gff for
BO16225.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-RA | 93..429 | 11..346 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:21:41 Download gff for
BO16225.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-RA | 93..429 | 11..346 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:21:41 Download gff for
BO16225.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 3515253..3515589 | 11..346 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 17:03:06 Download gff for
BO16225.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 3409286..3409622 | 11..346 | 99 | | Plus |
BO16225.complete Sequence
364 bp assembled on 2006-10-11
GenBank Submission: FJ633739
> BO16225.complete
GAAGTTATCAGTCGACATGTCGGACTACTCAAAGTTTCTGTCCAACTTGA
CGGATCAGCTGGCACTTCTGCCTAAAGTTGCGCCCAAAGGATTGGGACGA
TTGGGCAGCCTGGAGAACTTGGGCAATAATCTGGGCAATCTGCGCCCCGC
CCACAAGGCTCTGATGTGCGTGGGCGTGGCCACTGTGGCTTGCGTTGTCC
TCGGCTTCACTGTTAAGTCATTAAAGGGACATAGCCGCAAGGACAAGCAA
AGGATCATCAATGTACGAATCGGTAATCCGATCAAGCGGGAACTCGAGGG
GGCTGATAAGGACGAAGGATCCTTTGGGAAGGAAGAAGAACTCAATGCAA
GCTTTCTAGACCAT
BO16225.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:21:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13021-RB | 333 | CG13021-PB | 1..330 | 17..346 | 1650 | 100 | Plus |
CG13021-RA | 333 | CG13021-PA | 1..330 | 17..346 | 1650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:21:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13021-RB | 611 | CG13021-RB | 114..443 | 17..346 | 1650 | 100 | Plus |
CG13021-RA | 597 | CG13021-RA | 100..429 | 17..346 | 1650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:21:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 3515260..3515589 | 17..346 | 1650 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 20:21:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
diver2 | 4917 | diver2 DIVER2 4917bp | 2659..2709 | 20..68 | 105 | 72.5 | Plus |
BO16225.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:31:06 Download gff for
BO16225.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-RC | 1..333 | 17..349 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:49:15 Download gff for
BO16225.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-RC | 330..666 | 11..346 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:09:12 Download gff for
BO16225.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-RA | 100..429 | 17..348 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:31:07 Download gff for
BO16225.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-RC | 330..666 | 11..346 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:20:05 Download gff for
BO16225.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13021-RA | 100..429 | 17..348 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:20:05 Download gff for
BO16225.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 3515260..3515589 | 17..348 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:09:12 Download gff for
BO16225.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 3409293..3409622 | 17..348 | 99 | | Plus |
BO16225.pep Sequence
Translation from 16 to 364
> BO16225.pep
MSDYSKFLSNLTDQLALLPKVAPKGLGRLGSLENLGNNLGNLRPAHKALM
CVGVATVACVVLGFTVKSLKGHSRKDKQRIINVRIGNPIKRELEGADKDE
GSFGKEEELNASFLDH
BO16225.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:46:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13021-PB | 110 | CG13021-PB | 1..110 | 1..110 | 560 | 100 | Plus |
CG13021-PA | 110 | CG13021-PA | 1..110 | 1..110 | 560 | 100 | Plus |