Clone BO16245 Report

Search the DGRC for BO16245

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:162
Well:45
Vector:pDNR-Dual
Associated Gene/Transcriptisopeptidase-T-3-RB
Protein status:BO16245.pep: validated full length
Sequenced Size:1339

Clone Sequence Records

BO16245.3prime Sequence

799 bp (729 high quality bases) assembled on 2006-10-13

> BO16245.3prime
ATGGTCTAGAAAGCTTGCCCAGCGGTTCGTATAGAACTGATTGATGCCAA
GCACATGCTTCTCCTCATGGTACTTTTGAAGGATATGTGTGATGACCGAG
GTTGTGTCGTTGTCGCCACGCCACACGCGTATCGCATGTTCGTTTTCCAG
GATGCCCAGAAATGCCAAAAAAGTCTTTGGATTGCTTAGGGTCATCTGGA
CTTGTGGCATTTCCAGGATCACCTTTAGGATGGGCGAATCGGGCGCCAAG
CCTTCACGCAGTTCAATAACGCTACCCGATCGATTGTCGCACAACCATTC
GCACGCGGACGCCTTGTTGTTGCCAGTTTTCTTCAGCGCCGCAAGCACTG
CCGTCTCCTCGAAGCCCATTTCTGTAAGCGATTCTACAATCTCATCGCTG
GGAGGGGAATCCCGGTGGCTGTAGATTCGTACAATCTCAATCAAGGCAGC
AGTGTTTTCAATGGTTTCATTATTGGTGACAATCGTGGAGGGTGAGATGG
AAGATAGACTGTGCTGCATATTCATGCCCGGCGGTTCCTGTGGATTTTCC
TCGTTTTGGTTCTGTATTAGCCACTCCATCGTGGTCGAGTAAATGCCATT
GTGTGCTTTTAAGGCAAATGCGGCTAGCTCCCGCTTGAAGCCCATGTCCA
CGAGGCATTGCAGCGTATCCGCTTGCTGATTTCGGCGATTGATCAAACGT
TGCTTTAGCATAGCTATCAGGCGTGGAGCATAANGGCCAGCTCCTATAAC
CGCCGCAGAAGCTTGAGCCAAAGAGATCAACACCTTTCGCACATCGTAT

BO16245.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:05:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG11025-PA 1674 isopeptidase-T-3-RA 891..1671 799..19 3811 99.4 Minus
CG11025-PB 1308 isopeptidase-T-3-RB 525..1305 799..19 3811 99.4 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:17:00
Subject Length Description Subject Range Query Range Score Percent Strand
isopeptidase-T-3-RC 2491 CG11025-RC 1040..1820 799..19 3849 99.5 Minus
isopeptidase-T-3-RB 1778 CG11025-RB 629..1409 799..19 3849 99.5 Minus
isopeptidase-T-3-RA 2479 CG11025-RA 1028..1808 799..19 3849 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:16:55
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19671911..19672242 799..468 1649 99.7 Minus
2R 25286936 2R 19672294..19672597 468..165 1475 99 Minus
2R 25286936 2R 19672660..19672806 165..19 735 100 Minus
Blast to na_te.dros performed on 2015-02-12 11:16:58 has no hits.

BO16245.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:47:06 Download gff for BO16245.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11025-PB 525..1308 16..799 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:46:53 Download gff for BO16245.3prime
Subject Subject Range Query Range Percent Splice Strand
isopeptidase-T-3-RA 1028..1814 14..799 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:30:42 Download gff for BO16245.3prime
Subject Subject Range Query Range Percent Splice Strand
isopeptidase-T-3-RA 1028..1814 14..799 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:30:42 Download gff for BO16245.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 19672661..19672812 14..164 98   Minus
2R 19672294..19672597 165..468 99 -> Minus
2R 19671911..19672241 469..799 99 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:46:53 Download gff for BO16245.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15559416..15559746 469..799 99 -> Minus
arm_2R 15559799..15560102 165..468 99 -> Minus
arm_2R 15560166..15560317 14..164 98   Minus

BO16245.5prime Sequence

845 bp (788 high quality bases) assembled on 2006-10-13

> BO16245.5prime
GAAGTTATCAGTCGACATGCAAAAACTGCGCAGTTTGTTTCTCAGGAAAT
CAGCCCATACAAATCGCCCAGGTAGCTCTACTTCTGGCGAGGCAGACGAT
GCCAGCAGGCCAGGTGAATCTATCCTGGTGCGGGTAATCTGCCCCAGCTC
TCGGGTTCTTATCTTCAAAACGGACGTTAATAAGCGCCTAAACGAGCTGA
AGAGTGAGGTGATTCTGGAACTGAGCGACGATCCCGACTCCATCCAGCTA
TTTGCCCCAGATGTGCGGCATCTTAATCCGCGATACCGTCTCTATCGGGC
GGAATACTTCGGCGGCGAGCTTAACGAGGGCGACACGCTGGCCCAGCTAA
AAGTTCGCAACAATGAGACTTTTATACTCTCTCCACGACGCAATACTCTG
CCGCAGACTGTTTCACGGATACGTGAGGTTCCTGGCCCAAATGAGCAGCT
GGTGGAGAGCGCCACCCGATACGTGCCCGTCAATTGCAACCAGCTGCCCA
CCATCGATATTAATGAAATCTTTCAGCAGTCGAATATCCAATACGATGTG
CGAAAGGTGTTGATCTCTTTGGCTCAAGCTTCTGCGGCGGTTATAGGAGC
TGGCCCTTATGCTCCACGCCTGATAGCTATGCTAAAGCAACGTTTGATCA
ATCGCCGAAATCAGCAAGCGGATACGCTGCAATGCCTCGTGGACATGGGC
TTCAAGCGGGAGCTAGCCGCATTTGCCTTAAAAGCACACAATGGCATTTA
CTCGACCACGATGGAGTGGCTAATACAGAACCAAAACGAGGAAAATCCAC
AGGAACCGCCGGGCATGAATATGCAGCACAGTCTATCTTTCATCT

BO16245.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:05:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG11025-PB 1308 isopeptidase-T-3-RB 1..829 17..845 4070 99.6 Plus
CG11025-PA 1674 isopeptidase-T-3-RA 396..1195 46..845 3925 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:31:23
Subject Length Description Subject Range Query Range Score Percent Strand
isopeptidase-T-3-RB 1778 CG11025-RB 105..933 17..845 4100 99.6 Plus
isopeptidase-T-3-RC 2491 CG11025-RC 533..1344 34..845 4015 99.6 Plus
isopeptidase-T-3-RA 2479 CG11025-RA 533..1332 46..845 3955 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:31:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19671359..19671850 44..535 2430 99.6 Plus
2R 25286936 2R 19671906..19672215 536..845 1535 99.7 Plus
Blast to na_te.dros performed on 2015-02-10 16:31:18 has no hits.

BO16245.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:47:07 Download gff for BO16245.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11025-PB 1..829 17..845 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:14:25 Download gff for BO16245.5prime
Subject Subject Range Query Range Percent Splice Strand
isopeptidase-T-3-RB 105..933 17..845 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:47:42 Download gff for BO16245.5prime
Subject Subject Range Query Range Percent Splice Strand
isopeptidase-T-3-RB 105..933 17..845 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:47:42 Download gff for BO16245.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 19671267..19671295 17..45 100 -> Plus
2R 19671361..19671850 46..535 99 -> Plus
2R 19671906..19672215 536..845 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:14:25 Download gff for BO16245.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15558772..15558800 17..45 100 -> Plus
arm_2R 15558866..15559355 46..535 99 -> Plus
arm_2R 15559411..15559720 536..845 99   Plus

BO16245.complete Sequence

1339 bp assembled on 2006-10-11

GenBank Submission: FJ633749

> BO16245.complete
GAAGTTATCAGTCGACATGCAAAAACTGCGCAGTTTGTTTCTCAGGAAAT
CAGCCCATACAAATCGCCCAGGTAGCTCTACTTCTGGCGAGGCAGACGAT
GCCAGCAGGCCAGGTGAATCTATCCTGGTGCGGGTAATCTGCCCCAGCTC
TCGGGTTCTTATCTTCAAAACGGACGTTAATAAGCGCCTAAACGAGCTGA
AGAGTGAGGTGATTCTGGAACTGAGCGACGATCCCGACTCCATCCAGCTA
TTTGCCCCAGATGTGCGGCATCTTAATCCGCGATACCGTCTCTATCGGGC
GGAATACTTCGGCGGCGAGCTTAACGAGGGCGACACGCTGGCCCAGCTAA
AAGTTCGCAACAATGAGACTTTTATACTCTCTCCACGACGCAATACTCTG
CCGCAGACTGTTTCACGGATACGTGAGGTTCCTGGCCCAAATGAGCAGCT
GGTGGAGAGCGCCACCCGATACGTGCCCGTCAATTGCAACCAGCTGCCCA
CCATCGATATTAATGAAATCTTTCAGCAGTCGAATATCCAATACGATGTG
CGAAAGGTGTTGATCTCTTTGGCTCAAGCTTCTGCGGCGGTTATAGGAGC
TGGCCCTTATGCTCCACGCCTGATAGCTATGCTAAAGCAACGTTTGATCA
ATCGCCGAAATCAGCAAGCGGATACGCTGCAATGCCTCGTGGACATGGGC
TTCAAGCGGGAGCTAGCCGCATTTGCCTTAAAAGCACACAATGGCATTTA
CTCGACCACGATGGAGTGGCTAATACAGAACCAAAACGAGGAAAATCCAC
AGGAACCGCCGGGCATGAATATGCAGCACAGTCTATCTTCCATCTCACCC
TCCACGATTGTCACCAATAATGAAACCATTGAAAACACTGCTGCCTTGAT
TGAGATTGTACGAATCTACAGCCACCGGGATTCCCCTCCCAGCGATGAGA
TTGTAGAATCGCTTACAGAAATGGGCTTCGAGGAGACGGCAGTGCTTGCG
GCGCTGAAGAAAACTGGCAACAACAAGGCGTCCGCGTGCGAATGGTTGTG
CGACAATCGATCGGGTAGCGTTATTGAACTGCGTGAAGGCTTGGCGCCCG
ATTCGCCCATCCTAAAGGTGATCCTGGAAATGCCACAAGTCCAGATGACC
CTAAGCAATCCAAAGACTTTTTTGGCATTTCTGGGCATCCTGGAAAACGA
ACATGCGATACGCGTGTGGCGTGGCGACAACGACACAACCTCGGTCATCA
CACATATCCTTCAAAAGTACCATGAGGAGAAGCATGTGCTTGGCATCAAT
CAGTTCTATACGAACCGCTGGGCAAGCTTTCTAGACCAT

BO16245.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:52:12
Subject Length Description Subject Range Query Range Score Percent Strand
isopeptidase-T-3-RB 1308 CG11025-PB 1..1305 17..1321 6450 99.6 Plus
isopeptidase-T-3-RC 1686 CG11025-PC 396..1683 34..1321 6365 99.6 Plus
isopeptidase-T-3-RA 1674 CG11025-PA 396..1671 46..1321 6305 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:52:12
Subject Length Description Subject Range Query Range Score Percent Strand
isopeptidase-T-3-RB 1778 CG11025-RB 105..1409 17..1321 6450 99.6 Plus
isopeptidase-T-3-RC 2491 CG11025-RC 533..1820 34..1321 6365 99.6 Plus
isopeptidase-T-3-RA 2479 CG11025-RA 533..1808 46..1321 6305 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:52:09
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19671359..19671850 44..535 2430 99.6 Plus
2R 25286936 2R 19671906..19672242 536..872 1685 100 Plus
2R 25286936 2R 19672294..19672597 872..1175 1475 99 Plus
2R 25286936 2R 19672660..19672806 1175..1321 735 100 Plus
Blast to na_te.dros performed on 2014-11-27 10:52:11 has no hits.

BO16245.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:30:46 Download gff for BO16245.complete
Subject Subject Range Query Range Percent Splice Strand
isopeptidase-T-3-RB 1..1308 17..1324 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:48:58 Download gff for BO16245.complete
Subject Subject Range Query Range Percent Splice Strand
isopeptidase-T-3-RB 105..1415 17..1326 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:42:41 Download gff for BO16245.complete
Subject Subject Range Query Range Percent Splice Strand
isopeptidase-T-3-RB 105..1409 17..1323 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:30:46 Download gff for BO16245.complete
Subject Subject Range Query Range Percent Splice Strand
isopeptidase-T-3-RB 105..1415 17..1326 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:32:52 Download gff for BO16245.complete
Subject Subject Range Query Range Percent Splice Strand
isopeptidase-T-3-RB 105..1409 17..1323 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:32:52 Download gff for BO16245.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19672294..19672597 872..1175 99 -> Plus
2R 19672661..19672806 1176..1323 98   Plus
2R 19671267..19671295 17..45 100 -> Plus
2R 19671361..19671850 46..535 99 -> Plus
2R 19671906..19672241 536..871 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:42:41 Download gff for BO16245.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15558772..15558800 17..45 100 -> Plus
arm_2R 15558866..15559355 46..535 99 -> Plus
arm_2R 15559411..15559746 536..871 100 -> Plus
arm_2R 15559799..15560102 872..1175 99 -> Plus
arm_2R 15560166..15560311 1176..1323 98   Plus

BO16245.pep Sequence

Translation from 16 to 1339

> BO16245.pep
MQKLRSLFLRKSAHTNRPGSSTSGEADDASRPGESILVRVICPSSRVLIF
KTDVNKRLNELKSEVILELSDDPDSIQLFAPDVRHLNPRYRLYRAEYFGG
ELNEGDTLAQLKVRNNETFILSPRRNTLPQTVSRIREVPGPNEQLVESAT
RYVPVNCNQLPTIDINEIFQQSNIQYDVRKVLISLAQASAAVIGAGPYAP
RLIAMLKQRLINRRNQQADTLQCLVDMGFKRELAAFALKAHNGIYSTTME
WLIQNQNEENPQEPPGMNMQHSLSSISPSTIVTNNETIENTAALIEIVRI
YSHRDSPPSDEIVESLTEMGFEETAVLAALKKTGNNKASACEWLCDNRSG
SVIELREGLAPDSPILKVILEMPQVQMTLSNPKTFLAFLGILENEHAIRV
WRGDNDTTSVITHILQKYHEEKHVLGINQFYTNRWASFLDH

BO16245.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:46:36
Subject Length Description Subject Range Query Range Score Percent Strand
isopeptidase-T-3-PB 435 CG11025-PB 1..435 1..435 2228 100 Plus
isopeptidase-T-3-PC 561 CG11025-PC 128..561 2..435 2206 99.1 Plus
isopeptidase-T-3-PA 557 CG11025-PA 133..557 11..435 2181 100 Plus