Clone Sequence Records
BO16289.3prime Sequence
824 bp (795 high quality bases) assembled on 2006-10-13
> BO16289.3prime
ATGGTCTAGAAAGCTTGCCTTTATTTCTAAATCAGAATCCTGGATTTGCT
GAAGCACCGGCACCAGAGAGGCGAGTTCCGTGAGCAACAAAGGGTCCCGC
ACAAGCCCGTCGTCAATGCCGCGGACAAGCTGCTCCATTTCAAACAGAAA
GCGCCAGTCTTCCGCCTGCAGGTACCTGGATTTACCGTGGGTCTCCTGAC
TAGACTTTCTGAAGATGAGACGGTCAGACTGAAAGCTTCGCTCGGTTCGT
ACACAACAGCGATGGGTGTCAACATATTCCTTGTTGCATTGCAGACACAC
CGTGTCCCTTATATCCTTCTGGTCCTCCGTCGGAGTATTTGGTGTTCCAT
GCTGGCAGCAGGTGAGGCGCCGTTGTAGGGCGCCCAGATGCGTGTAGCCT
TTTTTGCACACATGCCTCCCCAAAGTGATGGCGGACTGACTATCCCTGAT
GGCTGGATGCCTCAGCCGACATCTGTGGGCCACCAGCGCTGACTTCAGTT
GAAACTGCTTCTGGCAGTACTCGCACGTAAGGTGTCCTGTCATGTGCTTC
TCCTGGTAGTGGCGGCGGAGCCTTCCAATTTGCCGAAAATTCTGTACTCC
GGGTCCATGCTTGTGGAATCTGCAATCGCTGCGTGGACAGTGGAAGCAGT
TGACCAACTGGTGATCCGGAACAGGTAACTTGTGGGTGCATACAATGTGG
TTGTGGTAGCGGACAAGACTCTTGTACACCTTGCCACACCACTCGCAACA
GAAGCCAAGCTCATCCACAAGGTCACCCACGGCAACGACGGTGCACCTCC
TGTTCTCCATGTCGACTGATAACT
BO16289.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:06:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14451-PA | 795 | CG14451-RA | 1..792 | 810..19 | 3960 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:42:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14451-RA | 862 | CG14451-RA | 51..842 | 810..19 | 3960 | 100 | Minus |
| mael-RD | 2143 | CG11254-RD | 48..273 | 19..244 | 1130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:42:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22721250..22722041 | 19..810 | 3960 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 16:42:35 has no hits.
BO16289.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:48:08 Download gff for
BO16289.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14451-PA | 1..795 | 16..810 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 20:15:15 Download gff for
BO16289.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14451-RA | 45..842 | 19..816 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:49:40 Download gff for
BO16289.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14451-RA | 45..842 | 19..816 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:49:40 Download gff for
BO16289.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22721250..22722047 | 19..816 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 20:15:15 Download gff for
BO16289.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22714350..22715147 | 19..816 | 99 | | Plus |
BO16289.5prime Sequence
824 bp (805 high quality bases) assembled on 2006-10-13
> BO16289.5prime
GAAGTTATCAGTCGACATGGAGAACAGGAGGTGCACCGTCGTTGCCGTGG
GTGACCTTGTGGATGAGCTTGGCTTCTGTTGCGAGTGGTGTGGCAAGGTG
TACAAGAGTCTTGTCCGCTACCACAACCACATTGTATGCACCCACAAGTT
ACCTGTTCCGGATCACCAGTTGGTCAACTGCTTCCACTGTCCACGCAGCG
ATTGCAGATTCCACAAGCATGGACCCGGAGTACAGAATTTTCGGCAAATT
GGAAGGCTCCGCCGCCACTACCAGGAGAAGCACATGACAGGACACCTTAC
GTGCGAGTACTGCCAGAAGCAGTTTCAACTGAAGTCAGCGCTGGTGGCCC
ACAGATGTCGGCTGAGGCATCCAGCCATCAGGGATAGTCAGTCCGCCATC
ACTTTGGGGAGGCATGTGTGCAAAAAAGGCTACACGCATCTGGGCGCCCT
ACAACGGCGCCTCACCTGCTGCCAGCATGGAACACCAAATACTCCGACGG
AGGACCAGAAGGATATAAGGGACACGGTGTGTCTGCAATGCAACAAGGAA
TATGTTGACACCCATCGCTGTTGTGTACGAACCGAGCGAAGCTTTCAGTC
TGACCGTCTCATCTTCAGAAAGTCTAGTCAGGAGACCCACGGTAAATCCA
GGTACCTGCAGGCGGAAGACTGGCGCTTTCTGTTTGAAATGGAGCAGCTT
GTCCGCGGCATTGACGACGGGCTTGTGCGGGACCCTTTGTTGCTCACGGA
ACTCGCCTCTCTGGTGCCGGTGCTTCAGCAAATCCAGGATTCTGATTTAG
AAATAAAGGCAAGCTTTCTAGACC
BO16289.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:06:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14451-PA | 795 | CG14451-RA | 1..792 | 17..808 | 3960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:11:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14451-RA | 862 | CG14451-RA | 51..842 | 17..808 | 3960 | 100 | Plus |
| mael-RD | 2143 | CG11254-RD | 48..273 | 808..583 | 1130 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:11:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22721250..22722041 | 808..17 | 3960 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:11:21 has no hits.
BO16289.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:48:09 Download gff for
BO16289.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14451-PA | 1..795 | 17..811 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 20:23:50 Download gff for
BO16289.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14451-RA | 45..842 | 11..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:07:43 Download gff for
BO16289.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14451-RA | 45..842 | 11..808 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:07:43 Download gff for
BO16289.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22721250..22722047 | 11..808 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 20:23:50 Download gff for
BO16289.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22714350..22715147 | 11..808 | 99 | | Minus |
BO16289.complete Sequence
826 bp assembled on 2006-10-11
GenBank Submission: FJ633770
> BO16289.complete
GAAGTTATCAGTCGACATGGAGAACAGGAGGTGCACCGTCGTTGCCGTGG
GTGACCTTGTGGATGAGCTTGGCTTCTGTTGCGAGTGGTGTGGCAAGGTG
TACAAGAGTCTTGTCCGCTACCACAACCACATTGTATGCACCCACAAGTT
ACCTGTTCCGGATCACCAGTTGGTCAACTGCTTCCACTGTCCACGCAGCG
ATTGCAGATTCCACAAGCATGGACCCGGAGTACAGAATTTTCGGCAAATT
GGAAGGCTCCGCCGCCACTACCAGGAGAAGCACATGACAGGACACCTTAC
GTGCGAGTACTGCCAGAAGCAGTTTCAACTGAAGTCAGCGCTGGTGGCCC
ACAGATGTCGGCTGAGGCATCCAGCCATCAGGGATAGTCAGTCCGCCATC
ACTTTGGGGAGGCATGTGTGCAAAAAAGGCTACACGCATCTGGGCGCCCT
ACAACGGCGCCTCACCTGCTGCCAGCATGGAACACCAAATACTCCGACGG
AGGACCAGAAGGATATAAGGGACACGGTGTGTCTGCAATGCAACAAGGAA
TATGTTGACACCCATCGCTGTTGTGTACGAACCGAGCGAAGCTTTCAGTC
TGACCGTCTCATCTTCAGAAAGTCTAGTCAGGAGACCCACGGTAAATCCA
GGTACCTGCAGGCGGAAGACTGGCGCTTTCTGTTTGAAATGGAGCAGCTT
GTCCGCGGCATTGACGACGGGCTTGTGCGGGACCCTTTGTTGCTCACGGA
ACTCGCCTCTCTGGTGCCGGTGCTTCAGCAAATCCAGGATTCTGATTTAG
AAATAAAGGCAAGCTTTCTAGACCAT
BO16289.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:17:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14451-RA | 795 | CG14451-PA | 1..792 | 17..808 | 3960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:17:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14451-RA | 862 | CG14451-RA | 51..842 | 17..808 | 3960 | 100 | Plus |
| mael-RD | 2143 | CG11254-RD | 48..273 | 808..583 | 1130 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:17:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22721250..22722041 | 808..17 | 3960 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:17:18 has no hits.
BO16289.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:30:21 Download gff for
BO16289.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14451-RA | 1..795 | 17..811 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:48:38 Download gff for
BO16289.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14451-RA | 1..795 | 17..811 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:55 Download gff for
BO16289.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14451-RA | 51..842 | 17..810 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:30:22 Download gff for
BO16289.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14451-RA | 1..795 | 17..811 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:18 Download gff for
BO16289.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14451-RA | 51..842 | 17..810 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:18 Download gff for
BO16289.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22721246..22722041 | 17..810 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:55 Download gff for
BO16289.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22714346..22715141 | 17..810 | 99 | | Minus |
BO16289.pep Sequence
Translation from 16 to 826
> BO16289.pep
MENRRCTVVAVGDLVDELGFCCEWCGKVYKSLVRYHNHIVCTHKLPVPDH
QLVNCFHCPRSDCRFHKHGPGVQNFRQIGRLRRHYQEKHMTGHLTCEYCQ
KQFQLKSALVAHRCRLRHPAIRDSQSAITLGRHVCKKGYTHLGALQRRLT
CCQHGTPNTPTEDQKDIRDTVCLQCNKEYVDTHRCCVRTERSFQSDRLIF
RKSSQETHGKSRYLQAEDWRFLFEMEQLVRGIDDGLVRDPLLLTELASLV
PVLQQIQDSDLEIKASFLDH
BO16289.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:46:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14451-PA | 264 | CG14451-PA | 1..264 | 1..264 | 1457 | 100 | Plus |
