Clone Sequence Records
BO16302.3prime Sequence
650 bp (650 high quality bases) assembled on 2006-10-13
> BO16302.3prime
ATGGTCTAGAAAGCTTGCGCTTGATCCTGGCAGGGCAATGTGTGCGTTGT
TCCTGTTTCCAACATCGTCATCATCCGAGTCCGTTAGCAGGTCGGATAGA
CTGAGATCCGAGGAGCGTTTCTCGAGGCCCTCCTCCACCAGTTGTCGCGT
CGGAAGGTTGGCGGGCATGGCGTACGTCTTCATGCAAAGGATAACGTGCT
CGCGAAAGAGTTGCTCCGAGTGTTTCATGATGGCGGCGGCCCGGTGATTC
AGTGAGTCGTGCGGATTCGGGTAACGCAGCAGCTGCGGCAGAAAGGTTTC
GAATATGTTGACCAGGTCATAGCTGGATGACCAAGCCTGCTTAAGGACAT
TCATGCAGACCAGGCCCGTGATGAACTCGATGTTTGGGTGCAGGATCTTG
GTGACAAAGCGAACGCGCGGTGCCGTCAACGGATAGTCCTGCGGCATGGT
CACATTTACCGTCCAAATGCCACCCTCGTAGGCACTGCCCAGTGGACCCT
CGAGGCAAACATTCAGGTTGGTCATGTCGTCGTCCACGGTGGTGCGGTAG
CCCGACGCCAACAGCCGGTTAACATCCCGGTCCAGACGGCGCCCCGCCAT
CGGCAACGTCGTGTTCACCAGCAATTGCTCGGCCATGTCGACTGATAACT
BO16302.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 15:49:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14739-PA | 621 | CG14739-RA | 1..618 | 636..19 | 3065 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:53:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14739-RA | 902 | CG14739-RA | 183..800 | 636..19 | 3075 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:53:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12048355..12048972 | 19..636 | 3075 | 99.8 | Plus |
Blast to na_te.dros performed on 2015-02-10 17:53:49 has no hits.
BO16302.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:48:24 Download gff for
BO16302.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14739-PA | 1..621 | 18..636 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 14:55:29 Download gff for
BO16302.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14739-RA | 183..804 | 13..636 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:18:32 Download gff for
BO16302.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14739-RA | 183..804 | 13..636 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:18:32 Download gff for
BO16302.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12048351..12048972 | 13..636 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 14:55:29 Download gff for
BO16302.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7874073..7874694 | 13..636 | 99 | | Plus |
BO16302.5prime Sequence
650 bp (650 high quality bases) assembled on 2006-10-13
> BO16302.5prime
GAAGTTATCAGTCGACATGGCCGAGCAATTGCTGGTGAACACGACGTTGC
CGATGGCGGGGCGCCGTCTGGACCGGGATGTTAACCGGCTGTTGGCGTCG
GGCTACCGCACCACCGTGGACGACGACATGACCAACCTGAATGTTTGCCT
CGAGGGTCCACTGGGCAGTGCCTACGAGGGTGGCATTTGGACGGTAAATG
TGACCATGCCGCAGGACTATCCGTTGACGGCACCGCGCGTTCGCTTTGTC
ACCAAGATCCTGCACCCAAACATCGAGTTCATCACGGGCCTGGTCTGCAT
GAATGTCCTTAAGCAGGCTTGGTCATCCAGCTATGACCTGGTCAACATAT
TCGAAACCTTTCTGCCGCAGCTGCTGCGTTACCCGAATCCGCACGACTCA
CTGAATCACCGGGCCGCCGCCATCATGAAACACTCGGAGCAACTCTTTCG
CGAGCACGTTATCCTTTGCATGAAGACGTACGCCATGCCCGCCAACCTTC
CGACGCGACAACTGGTGGAGGAGGGCCTCGAGAAACGCTCCTCGGATCTC
AGTCTATCCGACCTGCTAACGGACTCGGATGATGACGATGTTGGAAACAG
GAACAACGCACACATTGCCCTGCCAGGATCAAGCGCAAGCTTTCTAGACC
BO16302.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-09 15:50:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14739-PA | 621 | CG14739-RA | 1..618 | 17..634 | 3065 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 18:19:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14739-RA | 902 | CG14739-RA | 183..800 | 17..634 | 3075 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 18:19:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12048355..12048972 | 634..17 | 3075 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-01-30 18:19:56 has no hits.
BO16302.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:48:24 Download gff for
BO16302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14739-PA | 1..621 | 17..635 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 19:19:22 Download gff for
BO16302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14739-RA | 183..804 | 17..640 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 19:38:35 Download gff for
BO16302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14739-RA | 183..804 | 17..640 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 19:38:35 Download gff for
BO16302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12048351..12048972 | 17..640 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 19:19:22 Download gff for
BO16302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7874073..7874694 | 17..640 | 99 | | Minus |
BO16302.complete Sequence
652 bp assembled on 2007-10-17
GenBank Submission: FJ633775
> BO16302.complete
GAAGTTATCAGTCGACATGGCCGAGCAATTGCTGGTGAACACGACGTTGC
CGATGGCGGGGCGCCGTCTGGACCGGGATGTTAACCGGCTGTTGGCGTCG
GGCTACCGCACCACCGTGGACGACGACATGACCAACCTGAATGTTTGCCT
CGAGGGTCCACTGGGCAGTGCCTACGAGGGTGGCATTTGGACGGTAAATG
TGACCATGCCGCAGGACTATCCGTTGACGGCACCGCGCGTTCGCTTTGTC
ACCAAGATCCTGCACCCAAACATCGAGTTCATCACGGGCCTGGTCTGCAT
GAATGTCCTTAAGCAGGCTTGGTCATCCAGCTATGACCTGGTCAACATAT
TCGAAACCTTTCTGCCGCAGCTGCTGCGTTACCCGAATCCGCACGACTCA
CTGAATCACCGGGCCGCCGCCATCATGAAACACTCGGAGCAACTCTTTCG
CGAGCACGTTATCCTTTGCATGAAGACGTACGCCATGCCCGCCAACCTTC
CGACGCGACAACTGGTGGAGGAGGGCCTCGAGAAACGCTCCTCGGATCTC
AGTCTATCCGACCTGCTAACGGACTCGGATGATGACGATGTTGGAAACAG
GAACAACGCACACATTGCCCTGCCAGGATCAAGCGCAAGCTTTCTAGACC
AT
BO16302.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:14:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14739-RA | 621 | CG14739-PA | 1..618 | 17..634 | 3075 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:14:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14739-RA | 902 | CG14739-RA | 183..800 | 17..634 | 3075 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:14:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12048355..12048972 | 634..17 | 3075 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:14:46 has no hits.
BO16302.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:03:03 Download gff for
BO16302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14739-RA | 1..621 | 17..635 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:16:37 Download gff for
BO16302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14739-RA | 183..804 | 17..640 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:09:49 Download gff for
BO16302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14739-RA | 183..800 | 17..636 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:44:17 Download gff for
BO16302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14739-RA | 183..800 | 17..636 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:06:32 Download gff for
BO16302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14739-RA | 183..800 | 17..636 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:06:32 Download gff for
BO16302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12048351..12048972 | 17..636 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:09:49 Download gff for
BO16302.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7874073..7874694 | 17..636 | 99 | | Minus |
BO16302.pep Sequence
Translation from 16 to 652
> BO16302.pep
MAEQLLVNTTLPMAGRRLDRDVNRLLASGYRTTVDDDMTNLNVCLEGPLG
SAYEGGIWTVNVTMPQDYPLTAPRVRFVTKILHPNIEFITGLVCMNVLKQ
AWSSSYDLVNIFETFLPQLLRYPNPHDSLNHRAAAIMKHSEQLFREHVIL
CMKTYAMPANLPTRQLVEEGLEKRSSDLSLSDLLTDSDDDDVGNRNNAHI
ALPGSSASFLDH
BO16302.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:34:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14739-PA | 206 | CG14739-PA | 1..206 | 1..206 | 1075 | 100 | Plus |
| UbcE2H-PB | 183 | CG2257-PB | 4..180 | 12..190 | 358 | 41.7 | Plus |
| UbcE2H-PC | 183 | CG2257-PC | 4..180 | 12..190 | 358 | 41.7 | Plus |
| UbcE2H-PA | 183 | CG2257-PA | 4..180 | 12..190 | 358 | 41.7 | Plus |
| ben-PE | 151 | CG18319-PE | 6..133 | 16..141 | 213 | 36.2 | Plus |
