Clone BO16358 Report

Search the DGRC for BO16358

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:163
Well:58
Vector:pDNR-Dual
Associated Gene/TranscriptCG30284-RA
Protein status:BO16358.pep: validated full length
Sequenced Size:1093

Clone Sequence Records

BO16358.3prime Sequence

719 bp (718 high quality bases) assembled on 2006-10-13

> BO16358.3prime
ATGGTCTAGAAAGCTTGCCATCTTCCTAATCTCAATCAGTAGGGCGCTGT
ATAGAGATTGACAGAACTCCTCGAGACCCGCGTACGCGTTCCTCTCGATA
AAGGTCTTGACCACTGCCCACACGGACTTGAGAAACTGGATCTCGGCAAA
GACCAAAACGTCCGTGTGCTCTTCCACGGTGGCCTTCAGGCAGAAGTGCA
TCAGGACGACGAAGGTGTCCGCGTAGGGGATATCTGCGTTAACGCTCTGC
ACATCGATCGAGTACAGTTGGCCGGGTTGGCTGCACTCGCGCATGGTCTG
TGTCTCGGTAATTTTGGCAGTTTTGGGACCAACGTTCGCCTGAAGTGCCA
CAGTCATTGAGACAGTGCGCTGATTCTGGCCGCCGGCATTTCGCGCCCAG
ACGCCCATATTCAGATCGGTGGACTTGCGCCGCTCATGGAAGCTCTGCAG
GAACGGCGAGGCAGAGAAGAGCATGTTGAACAGTGCGTCCACCCGCACCA
TCAGCCGCTCCTGCAGAAGCTTGCGCCCCTCGTGCGACGCACTGCACCGG
GCGGTTAGGTCCTCTGGCCTTCTGTACCCTGCGGCCGTTTTTAATTGTAG
TGTTTTCGATGGAGTACTTATTAGTGTGCTCCGGTGGCTCGGAGTTTTTT
TTCCGCGCTTACCGGATGTTTGCGGTATATTTTCTCTGCTGACCAGCGCC
GTAACTGCCACCGAATTGC

BO16358.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:06:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG30284-PA 1062 CG30284-RA 359..1059 719..19 3505 100 Minus
CG30284-PB 978 CG30284-RB 415..975 579..19 2805 100 Minus
CG30284-PB 978 CG30284-RB 359..416 719..662 290 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:00:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG30284-RA 1180 CG30284-RA 435..1135 719..19 3505 100 Minus
CG30284-RB 1083 CG30284-RB 478..1038 579..19 2805 100 Minus
CG30284-RB 1083 CG30284-RB 422..479 719..662 290 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:00:45
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21650865..21651565 19..719 3505 100 Plus
Blast to na_te.dros performed on 2015-02-12 11:00:48 has no hits.

BO16358.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:49:36 Download gff for BO16358.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30284-PA 359..1062 18..719 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 00:42:51 Download gff for BO16358.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30284-RA 435..1140 13..719 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:39:49 Download gff for BO16358.3prime
Subject Subject Range Query Range Percent Splice Strand
CG30284-RA 435..1140 13..719 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:39:49 Download gff for BO16358.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 21650860..21651565 13..719 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 00:42:51 Download gff for BO16358.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17538365..17539070 13..719 99   Plus

BO16358.5prime Sequence

881 bp (810 high quality bases) assembled on 2006-10-13

> BO16358.5prime
GAAGTTATCAGTCGACATGAAGTCGATTCAGGCCCGGTTGAACCACCGAT
TCCGAAAAACTTTGGCGATGGACAAGCCGTCTAGCAGCAATAGCAATCGA
ATGAGCAGGAGCACTTCGAACTGCAGGAGCCCGGCCATAATACGCAGTCC
GCTGAACTCTGAGGAATTTCAGGACTCGGCAACGGCAGCCGCCACACAAC
AACGGCTTTTCTGGAGCGGCCAGCGGGCCTCGACGGCGGGCAGGGATGAT
AAAACCAAGCCTGATTCGACTGCCGCCGGAAAAAAGAAGCCACCTACGAC
GACAAGGCAGTCAAATTTTACCCAGACCGAACGAAGACGGACACATCGCA
AGCTGAGTCCGCGGAGCACGCGTTGCAATTCGGTGGCAGTTACGGCGCTG
GTCAGCAGAGAAAATATACCGCAAACATCCGGTAAGCGCGGAAAAAAAAC
TCCGAGCCACCGGAGCACACTAATAAGTACTCCATCGAAAACACTACAAT
TAAAAACGGCCGCAGGGTACAGAAGGCCAGAGGACCTAACCGCCCGGTGC
AGTGCGTCGCACGAGGGGCGCAAGCTTCTGCAGGAGCGGCTGATGGTGCG
GGTGGACGCACTGTTCAACATGCTCTTCTCTGCCTCGCCGTTCCTGCAGA
GCTTCCATGAGCGGCGCAAGTCCACCGATCTGAATATGGGCGTCTGGGCG
CGAAATGCCGGCGGCCAGAATCAGCGCACTGTCTCAATGACTGTGGCACT
TCAGGCGAACGTTGGTCCCAAAACTGCCAAAATTACCGAGACACAGACCA
TGCGCGAGTGCAGCCAACCCGGCCAACTGTACTCGATCGATGTGCAGAGC
GTTAACGCAGATATCCCCTACGCGGACACCT

BO16358.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 11:06:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG30284-PA 1062 CG30284-RA 1..865 17..881 4325 100 Plus
CG30284-PB 978 CG30284-RB 1..416 17..432 2080 100 Plus
CG30284-PB 978 CG30284-RB 415..781 515..881 1835 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 11:38:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG30284-RA 1180 CG30284-RA 77..941 17..881 4325 100 Plus
CG30284-RB 1083 CG30284-RB 64..479 17..432 2080 100 Plus
CG30284-RB 1083 CG30284-RB 478..844 515..881 1835 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 11:38:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21651059..21651923 881..17 4325 100 Minus
Blast to na_te.dros performed on 2015-02-08 11:38:19 has no hits.

BO16358.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:49:37 Download gff for BO16358.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30284-PA 1..865 17..881 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 23:35:43 Download gff for BO16358.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30284-RA 77..941 17..881 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 13:41:08 Download gff for BO16358.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30284-RA 77..941 17..881 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 13:41:08 Download gff for BO16358.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21651059..21651923 17..881 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 23:35:43 Download gff for BO16358.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17538564..17539428 17..881 100   Minus

BO16358.complete Sequence

1093 bp assembled on 2006-10-11

GenBank Submission: FJ633794

> BO16358.complete
GAAGTTATCAGTCGACATGAAGTCGATTCAGGCCCGGTTGAACCACCGAT
TCCGAAAAACTTTGGCGATGGACAAGCCGTCTAGCAGCAATAGCAATCGA
ATGAGCAGGAGCACTTCGAACTGCAGGAGCCCGGCCATAATACGCAGTCC
GCTGAACTCTGAGGAATTTCAGGACTCGGCAACGGCAGCCGCCACACAAC
AACGGCTTTTCTGGAGCGGCCAGCGGGCCTCGACGGCGGGCAGGGATGAT
AAAACCAAGCCTGATTCGACTGCCGCCGGAAAAAAGAAGCCACCTACGAC
GACAAGGCAGTCAAATTTTACCCAGACCGAACGAAGACGGACACATCGCA
AGCTGAGTCCGCGGAGCACGCGTTGCAATTCGGTGGCAGTTACGGCGCTG
GTCAGCAGAGAAAATATACCGCAAACATCCGGTAAGCGCGGAAAAAAAAC
TCCGAGCCACCGGAGCACACTAATAAGTACTCCATCGAAAACACTACAAT
TAAAAACGGCCGCAGGGTACAGAAGGCCAGAGGACCTAACCGCCCGGTGC
AGTGCGTCGCACGAGGGGCGCAAGCTTCTGCAGGAGCGGCTGATGGTGCG
GGTGGACGCACTGTTCAACATGCTCTTCTCTGCCTCGCCGTTCCTGCAGA
GCTTCCATGAGCGGCGCAAGTCCACCGATCTGAATATGGGCGTCTGGGCG
CGAAATGCCGGCGGCCAGAATCAGCGCACTGTCTCAATGACTGTGGCACT
TCAGGCGAACGTTGGTCCCAAAACTGCCAAAATTACCGAGACACAGACCA
TGCGCGAGTGCAGCCAACCCGGCCAACTGTACTCGATCGATGTGCAGAGC
GTTAACGCAGATATCCCCTACGCGGACACCTTCGTCGTCCTGATGCACTT
CTGCCTGAAGGCCACCGTGGAAGAGCACACGGACGTTTTGGTCTTTGCCG
AGATCCAGTTTCTCAAGTCCGTGTGGGCAGTGGTCAAGACCTTTATCGAG
AGGAACGCGTACGCGGGTCTCGAGGAGTTCTGTCAATCTCTATACAGCGC
CCTACTGATTGAGATTAGGAAGATGGCAAGCTTTCTAGACCAT

BO16358.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:09:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG30284-RA 1062 CG30284-PA 1..1059 17..1075 5295 100 Plus
CG30284-RB 978 CG30284-PB 415..975 515..1075 2805 100 Plus
CG30284-RB 978 CG30284-PB 1..416 17..432 2080 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:09:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG30284-RA 1180 CG30284-RA 77..1135 17..1075 5295 100 Plus
CG30284-RB 1083 CG30284-RB 478..1038 515..1075 2805 100 Plus
CG30284-RB 1083 CG30284-RB 64..479 17..432 2080 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:09:47
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21650865..21651923 1075..17 5295 100 Minus
Blast to na_te.dros performed on 2014-11-27 14:09:48 has no hits.

BO16358.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:29:01 Download gff for BO16358.complete
Subject Subject Range Query Range Percent Splice Strand
CG30284-RA 1..1062 17..1076 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:48:00 Download gff for BO16358.complete
Subject Subject Range Query Range Percent Splice Strand
CG30284-RA 77..1140 17..1081 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:35:17 Download gff for BO16358.complete
Subject Subject Range Query Range Percent Splice Strand
CG30284-RA 77..1135 17..1077 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:29:01 Download gff for BO16358.complete
Subject Subject Range Query Range Percent Splice Strand
CG30284-RA 77..1140 17..1081 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:04:50 Download gff for BO16358.complete
Subject Subject Range Query Range Percent Splice Strand
CG30284-RA 77..1135 17..1077 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:04:50 Download gff for BO16358.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21650863..21651923 17..1077 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:35:17 Download gff for BO16358.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17538368..17539428 17..1077 99   Minus

BO16358.pep Sequence

Translation from 16 to 1093

> BO16358.pep
MKSIQARLNHRFRKTLAMDKPSSSNSNRMSRSTSNCRSPAIIRSPLNSEE
FQDSATAAATQQRLFWSGQRASTAGRDDKTKPDSTAAGKKKPPTTTRQSN
FTQTERRRTHRKLSPRSTRCNSVAVTALVSRENIPQTSGKRGKKTPSHRS
TLISTPSKTLQLKTAAGYRRPEDLTARCSASHEGRKLLQERLMVRVDALF
NMLFSASPFLQSFHERRKSTDLNMGVWARNAGGQNQRTVSMTVALQANVG
PKTAKITETQTMRECSQPGQLYSIDVQSVNADIPYADTFVVLMHFCLKAT
VEEHTDVLVFAEIQFLKSVWAVVKTFIERNAYAGLEEFCQSLYSALLIEI
RKMASFLDH

BO16358.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:49:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG30284-PA 353 CG30284-PA 1..353 1..353 1794 100 Plus
CG30284-PB 325 CG30284-PB 1..325 1..353 1616 92.1 Plus
CG34394-PG 804 CG34394-PG 126..469 19..349 525 35.4 Plus
CG34394-PA 1138 CG34394-PA 561..904 19..349 525 35.4 Plus
CG34394-PH 1206 CG34394-PH 537..880 19..349 525 35.4 Plus